RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 IAPPP10997 89 aa7.34□□□□□ -1.23
SMARCC1-205ENST00000483847 ATP5IP56385 69 aaPredicted RBP7.34□□□□□ -1.23
SMARCC1-205ENST00000483847 STEAP1BQ6NZ63 245 aa7.34□□□□□ -1.23
SMARCC1-205ENST00000483847 SYT8Q8NBV8 401 aa7.34□□□□□ -1.23
SMARCC1-205ENST00000483847 BPIFCQ8NFQ6 507 aa7.34□□□□□ -1.23
SMARCC1-205ENST00000483847 SHANK2-AS3Q9BTD1 123 aa7.34□□□□□ -1.23
SMARCC1-205ENST00000483847 PAIP2BQ9ULR5 123 aaKnown RBP7.34□□□□□ -1.23
SMARCC1-205ENST00000483847 FAM25AB3EWG3 89 aa7.33□□□□□ -1.24
SMARCC1-205ENST00000483847 FAM25CB3EWG5 89 aa7.33□□□□□ -1.24
SMARCC1-205ENST00000483847 FAM25GB3EWG6 89 aa7.33□□□□□ -1.24
SMARCC1-205ENST00000483847 PRSS46E5RG02 174 aa7.33□□□□□ -1.24
SMARCC1-205ENST00000483847 TAS2R19P59542 299 aa7.33□□□□□ -1.24
SMARCC1-205ENST00000483847 NCS1P62166 190 aa7.33□□□□□ -1.24
SMARCC1-205ENST00000483847 LYPD5Q6UWN5 251 aa7.33□□□□□ -1.24
SMARCC1-205ENST00000483847 C20orf144Q9BQM9 153 aa7.33□□□□□ -1.24
SMARCC1-205ENST00000483847 MSRB1Q9NZV6 116 aa7.33□□□□□ -1.24
SMARCC1-205ENST00000483847 GPR132Q9UNW8 380 aa7.33□□□□□ -1.24
SMARCC1-205ENST00000483847 TRGV2A0A075B6R0 118 aa7.32□□□□□ -1.24
SMARCC1-205ENST00000483847 A0A087X0K7 114 aa7.32□□□□□ -1.24
SMARCC1-205ENST00000483847 TRAV12-3A0A0B4J271 114 aa7.32□□□□□ -1.24
SMARCC1-205ENST00000483847 A0A0B4J2A0 478 aa7.32□□□□□ -1.24
SMARCC1-205ENST00000483847 A6NHS1 94 aa7.32□□□□□ -1.24
SMARCC1-205ENST00000483847 PRAC2D3DTV9 90 aa7.32□□□□□ -1.24
SMARCC1-205ENST00000483847 J3KRW8 73 aa7.32□□□□□ -1.24
SMARCC1-205ENST00000483847 SNRPCP09234 159 aaKnown RBP7.32□□□□□ -1.24
SMARCC1-205ENST00000483847 RPL7P18124 248 aaKnown RBP7.32□□□□□ -1.24
SMARCC1-205ENST00000483847 RAB11AP62491 216 aa7.32□□□□□ -1.24
SMARCC1-205ENST00000483847 DAZ2Q13117 558 aaKnown RBP7.32□□□□□ -1.24
SMARCC1-205ENST00000483847 SURF2Q15527 256 aaPredicted RBP7.32□□□□□ -1.24
SMARCC1-205ENST00000483847 WFDC10BQ8IUB3 73 aa7.32□□□□□ -1.24
SMARCC1-205ENST00000483847 OR1S1Q8NH92 325 aa7.32□□□□□ -1.24
SMARCC1-205ENST00000483847 LINC00467Q9BRT7 94 aa7.32□□□□□ -1.24
SMARCC1-205ENST00000483847 SHPKQ9UHJ6 478 aa7.32□□□□□ -1.24
SMARCC1-205ENST00000483847 PLA2G2DQ9UNK4 145 aa7.32□□□□□ -1.24
SMARCC1-205ENST00000483847 ICOSQ9Y6W8 199 aa7.32□□□□□ -1.24
SMARCC1-205ENST00000483847 LINC00854A0A1B0GVQ3 168 aa7.31□□□□□ -1.24
SMARCC1-205ENST00000483847 LRCOL1A6NCL2 159 aa7.31□□□□□ -1.24
SMARCC1-205ENST00000483847 NPIPB6E9PJ23 425 aa7.31□□□□□ -1.24
SMARCC1-205ENST00000483847 PAX4O43316 350 aa7.31□□□□□ -1.24
SMARCC1-205ENST00000483847 PLA2G1BP04054 148 aaKnown RBP7.31□□□□□ -1.24
SMARCC1-205ENST00000483847 CCDC190Q86UF4 302 aa7.31□□□□□ -1.24
SMARCC1-205ENST00000483847 LRRC20Q8TCA0 184 aa7.31□□□□□ -1.24
SMARCC1-205ENST00000483847 DEFB104AQ8WTQ1 72 aa7.31□□□□□ -1.24
SMARCC1-205ENST00000483847 GSN-AS1Q9NRJ2 163 aa7.31□□□□□ -1.24
SMARCC1-205ENST00000483847 EXTL2Q9UBQ6 330 aa7.31□□□□□ -1.24
SMARCC1-205ENST00000483847 FUT9Q9Y231 359 aa7.31□□□□□ -1.24
SMARCC1-205ENST00000483847 HIGD1AQ9Y241 93 aa7.31□□□□□ -1.24
SMARCC1-205ENST00000483847 LY96Q9Y6Y9 160 aa7.31□□□□□ -1.24
SMARCC1-205ENST00000483847 TRAV9-2A0A087WT02 112 aa7.3□□□□□ -1.24
SMARCC1-205ENST00000483847 TRGV1A0A0A0MS02 117 aa7.3□□□□□ -1.24
SMARCC1-205ENST00000483847 PMS2P5A8MQ11 134 aa7.3□□□□□ -1.24
SMARCC1-205ENST00000483847 MRPS12O15235 138 aaKnown RBP7.3□□□□□ -1.24
SMARCC1-205ENST00000483847 PITX3O75364 302 aa7.3□□□□□ -1.24
SMARCC1-205ENST00000483847 ZNF324O75467 553 aaPredicted RBP7.3□□□□□ -1.24
SMARCC1-205ENST00000483847 IGHV3-53P01767 116 aa7.3□□□□□ -1.24
SMARCC1-205ENST00000483847 AKR1C4P17516 323 aa7.3□□□□□ -1.24
SMARCC1-205ENST00000483847 VBP1P61758 197 aa7.3□□□□□ -1.24
SMARCC1-205ENST00000483847 AKR1C1Q04828 323 aa7.3□□□□□ -1.24
SMARCC1-205ENST00000483847 C11orf72Q8NBR9 251 aa7.3□□□□□ -1.24
SMARCC1-205ENST00000483847 DISC1C4P0D8 188 aa7.29□□□□□ -1.24
SMARCC1-205ENST00000483847 H3BTX0 84 aa7.29□□□□□ -1.24
SMARCC1-205ENST00000483847 HYPMO75409 117 aa7.29□□□□□ -1.24
SMARCC1-205ENST00000483847 IL5P05113 134 aa7.29□□□□□ -1.24
SMARCC1-205ENST00000483847 OR5G3P0C626 314 aa7.29□□□□□ -1.24
SMARCC1-205ENST00000483847 CT45A10P0DMU9 189 aa7.29□□□□□ -1.24
SMARCC1-205ENST00000483847 RAP2BP61225 183 aa7.29□□□□□ -1.24
SMARCC1-205ENST00000483847 PATE2Q6UY27 113 aa7.29□□□□□ -1.24
SMARCC1-205ENST00000483847 CYP2G1PQ6ZSU1 146 aa7.29□□□□□ -1.24
SMARCC1-205ENST00000483847 ACOT7LQ6ZUV0 252 aa7.29□□□□□ -1.24
SMARCC1-205ENST00000483847 ZBTB8BQ8NAP8 495 aaPredicted RBP7.29□□□□□ -1.24
SMARCC1-205ENST00000483847 OR51S1Q8NGJ8 323 aa7.29□□□□□ -1.24
SMARCC1-205ENST00000483847 NTN5Q8WTR8 489 aaPredicted RBP7.29□□□□□ -1.24
SMARCC1-205ENST00000483847 PYGO2Q9BRQ0 406 aa7.29□□□□□ -1.24
SMARCC1-205ENST00000483847 ZNF331Q9NQX6 463 aaPredicted RBP7.29□□□□□ -1.24
SMARCC1-205ENST00000483847 KCNIP3Q9Y2W7 256 aa7.29□□□□□ -1.24
SMARCC1-205ENST00000483847 KLF12Q9Y4X4 402 aa7.29□□□□□ -1.24
SMARCC1-205ENST00000483847 RNF213Q63HN8 5207 aa7.28□□□□□ -1.24
SMARCC1-205ENST00000483847 H3BP45 60 aa7.28□□□□□ -1.24
SMARCC1-205ENST00000483847 WRBO00258 174 aa7.28□□□□□ -1.24
SMARCC1-205ENST00000483847 SLC17A3O00476 420 aa7.28□□□□□ -1.24
SMARCC1-205ENST00000483847 PRAF2O60831 178 aa7.28□□□□□ -1.24
SMARCC1-205ENST00000483847 LINC00869P0C866 280 aa7.28□□□□□ -1.24
SMARCC1-205ENST00000483847 EVI2AP22794 236 aa7.28□□□□□ -1.24
SMARCC1-205ENST00000483847 S100A7P31151 101 aa7.28□□□□□ -1.24
SMARCC1-205ENST00000483847 SMCPP49901 116 aaPredicted RBP7.28□□□□□ -1.24
SMARCC1-205ENST00000483847 CRYBA4P53673 196 aa7.28□□□□□ -1.24
SMARCC1-205ENST00000483847 ZNF431Q8TF32 576 aaPredicted RBP7.28□□□□□ -1.24
SMARCC1-205ENST00000483847 C8orf49Q96NF6 230 aa7.28□□□□□ -1.24
SMARCC1-205ENST00000483847 Q9H521 79 aa7.28□□□□□ -1.24
SMARCC1-205ENST00000483847 SPINK4O60575 86 aa7.27□□□□□ -1.25
SMARCC1-205ENST00000483847 ANXA7P20073 488 aaKnown RBP7.27□□□□□ -1.25
SMARCC1-205ENST00000483847 PLP1P60201 277 aa7.27□□□□□ -1.25
SMARCC1-205ENST00000483847 FHL2Q14192 279 aa7.27□□□□□ -1.25
SMARCC1-205ENST00000483847 MRPL23Q16540 153 aaKnown RBP7.27□□□□□ -1.25
SMARCC1-205ENST00000483847 MZT2AQ6P582 158 aa7.27□□□□□ -1.25
SMARCC1-205ENST00000483847 TEPPQ6URK8 271 aa7.27□□□□□ -1.25
SMARCC1-205ENST00000483847 LCN15Q6UWW0 184 aa7.27□□□□□ -1.25
SMARCC1-205ENST00000483847 NEGR1Q7Z3B1 354 aa7.27□□□□□ -1.25
SMARCC1-205ENST00000483847 Q8N814 137 aa7.27□□□□□ -1.25
SMARCC1-205ENST00000483847 ST6GAL2Q96JF0 529 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms