RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 APOBP04114 4563 aaKnown RBP9.74□□□□□ -0.85
VARS-226ENST00000483275 FAM25EA8MYX2 175 aa9.74□□□□□ -0.85
VARS-226ENST00000483275 HIST1H1AQ02539 215 aaPredicted RBP9.74□□□□□ -0.85
VARS-226ENST00000483275 C6orf223Q8N319 242 aa9.74□□□□□ -0.85
VARS-226ENST00000483275 C12orf45Q8N5I9 185 aaPredicted RBP9.74□□□□□ -0.85
VARS-226ENST00000483275 SEC22CQ9BRL7 303 aa9.74□□□□□ -0.85
VARS-226ENST00000483275 TMEM147Q9BVK8 224 aa9.74□□□□□ -0.85
VARS-226ENST00000483275 GPN1Q9HCN4 374 aaPredicted RBP9.74□□□□□ -0.85
VARS-226ENST00000483275 GSKIPQ9P0R6 139 aa9.74□□□□□ -0.85
VARS-226ENST00000483275 STRAPQ9Y3F4 350 aaKnown RBP9.74□□□□□ -0.85
VARS-226ENST00000483275 SMCO3A2RU48 225 aa9.73□□□□□ -0.85
VARS-226ENST00000483275 C5orf51A6NDU8 294 aa9.73□□□□□ -0.85
VARS-226ENST00000483275 LYRM9A8MSI8 78 aa9.73□□□□□ -0.85
VARS-226ENST00000483275 BOLA2-SMG1P6H3BVE0 249 aa9.73□□□□□ -0.85
VARS-226ENST00000483275 SPANXN5Q5MJ07 72 aa9.73□□□□□ -0.85
VARS-226ENST00000483275 SAMD13Q5VXD3 122 aa9.73□□□□□ -0.85
VARS-226ENST00000483275 BPIFCQ8NFQ6 507 aa9.73□□□□□ -0.85
VARS-226ENST00000483275 RNF141Q8WVD5 230 aa9.73□□□□□ -0.85
VARS-226ENST00000483275 UHRF2Q96PU4 802 aa9.73□□□□□ -0.85
VARS-226ENST00000483275 KRTAP1-5Q9BYS1 174 aa9.73□□□□□ -0.85
VARS-226ENST00000483275 PSENENQ9NZ42 101 aa9.73□□□□□ -0.85
VARS-226ENST00000483275 LINC00588Q9Y4M8 146 aa9.73□□□□□ -0.85
VARS-226ENST00000483275 H3BRN7 92 aa9.72□□□□□ -0.85
VARS-226ENST00000483275 SSSCA1O60232 199 aa9.72□□□□□ -0.85
VARS-226ENST00000483275 SNRPCP09234 159 aaKnown RBP9.72□□□□□ -0.85
VARS-226ENST00000483275 POLR2GP62487 172 aaKnown RBP eCLIP9.72□□□□□ -0.85
VARS-226ENST00000483275 RHOBP62745 196 aa9.72□□□□□ -0.85
VARS-226ENST00000483275 ID3Q02535 119 aa9.72□□□□□ -0.85
VARS-226ENST00000483275 ZBTB8BQ8NAP8 495 aaPredicted RBP9.72□□□□□ -0.85
VARS-226ENST00000483275 OR4D5Q8NGN0 318 aa9.72□□□□□ -0.85
VARS-226ENST00000483275 L7N2F9 121 aa9.71□□□□□ -0.86
VARS-226ENST00000483275 CCSO14618 274 aa9.71□□□□□ -0.86
VARS-226ENST00000483275 CCNKO75909 580 aa9.71□□□□□ -0.86
VARS-226ENST00000483275 DUSP14O95147 198 aaKnown RBP9.71□□□□□ -0.86
VARS-226ENST00000483275 IL5P05113 134 aa9.71□□□□□ -0.86
VARS-226ENST00000483275 FAM3BP58499 235 aaPredicted RBP9.71□□□□□ -0.86
VARS-226ENST00000483275 VAMP2P63027 116 aa9.71□□□□□ -0.86
VARS-226ENST00000483275 KIR3DS1Q14943 382 aa9.71□□□□□ -0.86
VARS-226ENST00000483275 LINC01587Q99440 93 aa9.71□□□□□ -0.86
VARS-226ENST00000483275 PARD6GQ9BYG4 376 aaPredicted RBP9.71□□□□□ -0.86
VARS-226ENST00000483275 SLC45A2Q9UMX9 530 aa9.71□□□□□ -0.86
VARS-226ENST00000483275 PRAF2O60831 178 aa9.7□□□□□ -0.86
VARS-226ENST00000483275 CDK2AP2O75956 126 aa9.7□□□□□ -0.86
VARS-226ENST00000483275 ATP5G1P05496 136 aa9.7□□□□□ -0.86
VARS-226ENST00000483275 TSPOP30536 169 aa9.7□□□□□ -0.86
VARS-226ENST00000483275 ATP5G3P48201 142 aa9.7□□□□□ -0.86
VARS-226ENST00000483275 IFITM3Q01628 133 aa9.7□□□□□ -0.86
VARS-226ENST00000483275 CYP2G1PQ6ZSU1 146 aa9.7□□□□□ -0.86
VARS-226ENST00000483275 SSX7Q7RTT5 188 aa9.7□□□□□ -0.86
VARS-226ENST00000483275 SPATA12Q7Z6I5 190 aa9.7□□□□□ -0.86
VARS-226ENST00000483275 OR8A1Q8NGG7 326 aa9.7□□□□□ -0.86
VARS-226ENST00000483275 SHANK2-AS3Q9BTD1 123 aa9.7□□□□□ -0.86
VARS-226ENST00000483275 NOP10Q9NPE3 64 aaKnown RBP9.7□□□□□ -0.86
VARS-226ENST00000483275 HIGD1AQ9Y241 93 aa9.7□□□□□ -0.86
VARS-226ENST00000483275 INMT-MINDY4F8WBC2 141 aa9.69□□□□□ -0.86
VARS-226ENST00000483275 CFDP00746 253 aaPredicted RBP9.69□□□□□ -0.86
VARS-226ENST00000483275 OR5G3P0C626 314 aa9.69□□□□□ -0.86
VARS-226ENST00000483275 LINC00869P0C866 280 aa9.69□□□□□ -0.86
VARS-226ENST00000483275 CXCL3P19876 107 aa9.69□□□□□ -0.86
VARS-226ENST00000483275 PVALBP20472 110 aaPredicted RBP9.69□□□□□ -0.86
VARS-226ENST00000483275 RRAS2P62070 204 aaPredicted RBP9.69□□□□□ -0.86
VARS-226ENST00000483275 CLINT1Q14677 625 aa9.69□□□□□ -0.86
VARS-226ENST00000483275 NRARPQ7Z6K4 114 aa9.69□□□□□ -0.86
VARS-226ENST00000483275 SMIM8Q96KF7 97 aa9.69□□□□□ -0.86
VARS-226ENST00000483275 C2orf50Q96LR7 162 aa9.69□□□□□ -0.86
VARS-226ENST00000483275 GPR82Q96P67 336 aa9.69□□□□□ -0.86
VARS-226ENST00000483275 PPP1R14DQ9NXH3 145 aa9.69□□□□□ -0.86
VARS-226ENST00000483275 LSM5Q9Y4Y9 91 aaKnown RBP9.69□□□□□ -0.86
VARS-226ENST00000483275 A0A0J9YY99 117 aa9.68□□□□□ -0.86
VARS-226ENST00000483275 H3BTX0 84 aa9.68□□□□□ -0.86
VARS-226ENST00000483275 BCAP31P51572 246 aa9.68□□□□□ -0.86
VARS-226ENST00000483275 CCL18P55774 89 aa9.68□□□□□ -0.86
VARS-226ENST00000483275 TAS2R30P59541 319 aa9.68□□□□□ -0.86
VARS-226ENST00000483275 DLK1P80370 383 aa9.68□□□□□ -0.86
VARS-226ENST00000483275 RCL1Q9Y2P8 373 aaKnown RBP9.68□□□□□ -0.86
VARS-226ENST00000483275 TRAV26-1A0A087WT03 109 aa9.67□□□□□ -0.86
VARS-226ENST00000483275 CBY3A6NI87 242 aa9.67□□□□□ -0.86
VARS-226ENST00000483275 TSC22D2O75157 780 aa9.67□□□□□ -0.86
VARS-226ENST00000483275 HYPMO75409 117 aa9.67□□□□□ -0.86
VARS-226ENST00000483275 MBPP02686 304 aaPredicted RBP9.67□□□□□ -0.86
VARS-226ENST00000483275 RPL7P18124 248 aaKnown RBP9.67□□□□□ -0.86
VARS-226ENST00000483275 TAS2R60P59551 318 aa9.67□□□□□ -0.86
VARS-226ENST00000483275 KRTAP10-2P60368 255 aa9.67□□□□□ -0.86
VARS-226ENST00000483275 S100A10P60903 97 aa9.67□□□□□ -0.86
VARS-226ENST00000483275 RAP2BP61225 183 aa9.67□□□□□ -0.86
VARS-226ENST00000483275 SLC38A11Q08AI6 406 aa9.67□□□□□ -0.86
VARS-226ENST00000483275 OR5I1Q13606 314 aa9.67□□□□□ -0.86
VARS-226ENST00000483275 PSG3Q16557 428 aa9.67□□□□□ -0.86
VARS-226ENST00000483275 TMEM144Q7Z5S9 345 aa9.67□□□□□ -0.86
VARS-226ENST00000483275 OR10P1Q8NGE3 313 aa9.67□□□□□ -0.86
VARS-226ENST00000483275 LRRC20Q8TCA0 184 aa9.67□□□□□ -0.86
VARS-226ENST00000483275 RPUSD4Q96CM3 377 aaKnown RBP9.67□□□□□ -0.86
VARS-226ENST00000483275 C16orf74Q96GX8 76 aa9.67□□□□□ -0.86
VARS-226ENST00000483275 ARL6Q9H0F7 186 aa9.67□□□□□ -0.86
VARS-226ENST00000483275 MGAT4CQ9UBM8 478 aa9.67□□□□□ -0.86
VARS-226ENST00000483275 PRAC2D3DTV9 90 aa9.66□□□□□ -0.86
VARS-226ENST00000483275 J3KRW8 73 aa9.66□□□□□ -0.86
VARS-226ENST00000483275 GOSR2O14653 212 aa9.66□□□□□ -0.86
VARS-226ENST00000483275 METTL15P1P0C7V9 234 aa9.66□□□□□ -0.86
VARS-226ENST00000483275 HOXA5P20719 270 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms