RNA–Protein interactions for RNA: ENST00000481673.5

CHKB-209, Transcript of choline kinase beta, humanhuman

TSL 1 (best)

Gene CHKB, Length 1,856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-209ENST00000481673 SOX21Q9Y651 276 aaPredicted RBP15.39■□□□□ 0.05
CHKB-209ENST00000481673 PTPN13Q12923 2485 aa15.38■□□□□ 0.05
CHKB-209ENST00000481673 A0A087X0K7 114 aa15.38■□□□□ 0.05
CHKB-209ENST00000481673 IZUMO1RA6ND01 250 aa15.38■□□□□ 0.05
CHKB-209ENST00000481673 DIRC3C9JPN6 131 aa15.38■□□□□ 0.05
CHKB-209ENST00000481673 IER3P46695 156 aa15.38■□□□□ 0.05
CHKB-209ENST00000481673 TPPP2P59282 170 aa15.38■□□□□ 0.05
CHKB-209ENST00000481673 DEFB112Q30KQ8 113 aa15.38■□□□□ 0.05
CHKB-209ENST00000481673 TSKUQ8WUA8 353 aa15.38■□□□□ 0.05
CHKB-209ENST00000481673 J3QKU1 62 aa15.37■□□□□ 0.05
CHKB-209ENST00000481673 IGLV2-11P01706 119 aa15.37■□□□□ 0.05
CHKB-209ENST00000481673 SMIM6P0DI80 62 aa15.37■□□□□ 0.05
CHKB-209ENST00000481673 BLCAPP62952 87 aa15.37■□□□□ 0.05
CHKB-209ENST00000481673 PSG3Q16557 428 aa15.37■□□□□ 0.05
CHKB-209ENST00000481673 PRSS22Q9GZN4 317 aa15.37■□□□□ 0.05
CHKB-209ENST00000481673 NAT8BQ9UHF3 227 aa15.37■□□□□ 0.05
CHKB-209ENST00000481673 NAV2Q8IVL1 2488 aa15.37■□□□□ 0.05
CHKB-209ENST00000481673 FAM231BA6NCW3 169 aa15.37■□□□□ 0.05
CHKB-209ENST00000481673 S100A2P29034 98 aa15.37■□□□□ 0.05
CHKB-209ENST00000481673 PRR27Q6MZM9 219 aa15.37■□□□□ 0.05
CHKB-209ENST00000481673 TEX29Q8N6K0 151 aa15.37■□□□□ 0.05
CHKB-209ENST00000481673 FBN2P35556 2912 aa15.37■□□□□ 0.05
CHKB-209ENST00000481673 C19orf71A6NCJ1 209 aa15.36■□□□□ 0.05
CHKB-209ENST00000481673 A8MWL6 223 aa15.36■□□□□ 0.05
CHKB-209ENST00000481673 IGLV1-40P01703 118 aa15.36■□□□□ 0.05
CHKB-209ENST00000481673 P01737 135 aa15.36■□□□□ 0.05
CHKB-209ENST00000481673 CYB5R2Q6BCY4 276 aa15.36■□□□□ 0.05
CHKB-209ENST00000481673 OR4B1Q8NGF8 309 aa15.36■□□□□ 0.05
CHKB-209ENST00000481673 LINC00527Q9UJ94 153 aa15.36■□□□□ 0.05
CHKB-209ENST00000481673 CELSR2Q9HCU4 2923 aa15.36■□□□□ 0.05
CHKB-209ENST00000481673 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.35■□□□□ 0.05
CHKB-209ENST00000481673 XKRY2A2RUG3 117 aa15.35■□□□□ 0.05
CHKB-209ENST00000481673 TMEM89A2RUT3 159 aa15.35■□□□□ 0.05
CHKB-209ENST00000481673 ARL3P36405 182 aa15.35■□□□□ 0.05
CHKB-209ENST00000481673 HIST3H2BBQ8N257 126 aa15.35■□□□□ 0.05
CHKB-209ENST00000481673 GFRA4Q9GZZ7 299 aa15.35■□□□□ 0.05
CHKB-209ENST00000481673 RPP21Q9H633 154 aaKnown RBP15.35■□□□□ 0.05
CHKB-209ENST00000481673 PSG8Q9UQ74 426 aa15.35■□□□□ 0.05
CHKB-209ENST00000481673 CENPEQ02224 2701 aa15.35■□□□□ 0.05
CHKB-209ENST00000481673 NDUFA4O00483 81 aa15.35■□□□□ 0.05
CHKB-209ENST00000481673 PRNTQ86SH4 94 aa15.35■□□□□ 0.05
CHKB-209ENST00000481673 SGK494Q96LW2 274 aa15.35■□□□□ 0.05
CHKB-209ENST00000481673 SLC50A1Q9BRV3 221 aa15.35■□□□□ 0.05
CHKB-209ENST00000481673 CLEC5AQ9NY25 188 aa15.35■□□□□ 0.05
CHKB-209ENST00000481673 U3KQE9 123 aa15.35■□□□□ 0.05
CHKB-209ENST00000481673 MAP1AP78559 2803 aaPredicted RBP15.34■□□□□ 0.05
CHKB-209ENST00000481673 IGHV3-35A0A0C4DH35 117 aa15.34■□□□□ 0.05
CHKB-209ENST00000481673 CLPSL1A2RUU4 121 aa15.34■□□□□ 0.05
CHKB-209ENST00000481673 PLA2G2AP14555 144 aa15.34■□□□□ 0.05
CHKB-209ENST00000481673 WIPF2Q8TF74 440 aaPredicted RBP15.34■□□□□ 0.05
CHKB-209ENST00000481673 Q96MF0 132 aa15.34■□□□□ 0.05
CHKB-209ENST00000481673 ZNF331Q9NQX6 463 aaPredicted RBP15.34■□□□□ 0.05
CHKB-209ENST00000481673 SMAD5-AS1Q9Y6J3 95 aa15.34■□□□□ 0.05
CHKB-209ENST00000481673 ZNF785A8K8V0 405 aa15.33■□□□□ 0.05
CHKB-209ENST00000481673 NPIPB6E9PJ23 425 aa15.33■□□□□ 0.05
CHKB-209ENST00000481673 IGHV4-59P01825 116 aa15.33■□□□□ 0.05
CHKB-209ENST00000481673 ATP5L2Q7Z4Y8 100 aa15.33■□□□□ 0.05
CHKB-209ENST00000481673 MAPK1IP1LQ8NDC0 245 aa15.33■□□□□ 0.05
CHKB-209ENST00000481673 NOL4LQ96MY1 436 aaPredicted RBP15.33■□□□□ 0.05
CHKB-209ENST00000481673 C12orf57Q99622 126 aa15.33■□□□□ 0.05
CHKB-209ENST00000481673 PRDM13Q9H4Q3 707 aa15.33■□□□□ 0.05
CHKB-209ENST00000481673 HLA-DQA1P01909 254 aa15.33■□□□□ 0.04
CHKB-209ENST00000481673 PF4V1P10720 104 aa15.33■□□□□ 0.04
CHKB-209ENST00000481673 CFHR3Q02985 330 aa15.33■□□□□ 0.04
CHKB-209ENST00000481673 SAPCD1Q5SSQ6 148 aa15.33■□□□□ 0.04
CHKB-209ENST00000481673 Q6YL49 198 aa15.33■□□□□ 0.04
CHKB-209ENST00000481673 MRPL18Q9H0U6 180 aaKnown RBP15.33■□□□□ 0.04
CHKB-209ENST00000481673 TRAV8-1A0A0A6YYK1 113 aa15.32■□□□□ 0.04
CHKB-209ENST00000481673 SNURFLB1AK76 121 aa15.32■□□□□ 0.04
CHKB-209ENST00000481673 COX8CQ7Z4L0 72 aa15.32■□□□□ 0.04
CHKB-209ENST00000481673 VPREB3Q9UKI3 123 aa15.32■□□□□ 0.04
CHKB-209ENST00000481673 VPS13CQ709C8 3753 aa15.31■□□□□ 0.04
CHKB-209ENST00000481673 M0R3E3 92 aa15.31■□□□□ 0.04
CHKB-209ENST00000481673 CBLN1P23435 193 aa15.31■□□□□ 0.04
CHKB-209ENST00000481673 GBGT1Q8N5D6 347 aa15.31■□□□□ 0.04
CHKB-209ENST00000481673 PSMG3-AS1Q96PY0 264 aa15.31■□□□□ 0.04
CHKB-209ENST00000481673 TCL1AP56279 114 aa15.31■□□□□ 0.04
CHKB-209ENST00000481673 NUP35Q8NFH5 326 aa15.31■□□□□ 0.04
CHKB-209ENST00000481673 GPR61Q9BZJ8 451 aa15.31■□□□□ 0.04
CHKB-209ENST00000481673 POLQO75417 2590 aa15.31■□□□□ 0.04
CHKB-209ENST00000481673 SVEP1Q4LDE5 3571 aa15.3■□□□□ 0.04
CHKB-209ENST00000481673 IGHG4P01861 327 aa15.3■□□□□ 0.04
CHKB-209ENST00000481673 CT45A10P0DMU9 189 aa15.3■□□□□ 0.04
CHKB-209ENST00000481673 MRPL53Q96EL3 112 aaKnown RBP15.3■□□□□ 0.04
CHKB-209ENST00000481673 NEU1Q99519 415 aa15.3■□□□□ 0.04
CHKB-209ENST00000481673 A0A1W2PS18 150 aa15.29■□□□□ 0.04
CHKB-209ENST00000481673 RBAKDNA6NC62 111 aa15.29■□□□□ 0.04
CHKB-209ENST00000481673 IFITM10A6NMD0 228 aa15.29■□□□□ 0.04
CHKB-209ENST00000481673 HIGD1CA8MV81 97 aa15.29■□□□□ 0.04
CHKB-209ENST00000481673 CA1P00915 261 aaPredicted RBP15.29■□□□□ 0.04
CHKB-209ENST00000481673 TMEM136Q6ZRR5 245 aa15.29■□□□□ 0.04
CHKB-209ENST00000481673 CIARTQ8N365 385 aaPredicted RBP15.29■□□□□ 0.04
CHKB-209ENST00000481673 C16orf54Q6UWD8 224 aa15.29■□□□□ 0.04
CHKB-209ENST00000481673 LINC00322Q6ZN03 302 aaPredicted RBP15.29■□□□□ 0.04
CHKB-209ENST00000481673 KRTAP1-3Q8IUG1 177 aa15.29■□□□□ 0.04
CHKB-209ENST00000481673 OR4X2Q8NGF9 303 aa15.29■□□□□ 0.04
CHKB-209ENST00000481673 CHD6Q8TD26 2715 aa15.28■□□□□ 0.04
CHKB-209ENST00000481673 IGHV3OR16-8A0A075B7F1 116 aa15.28■□□□□ 0.04
CHKB-209ENST00000481673 CHEK1O14757 476 aa15.28■□□□□ 0.04
CHKB-209ENST00000481673 FOXA3P55318 350 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms