RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 MIXL1Q9H2W2 232 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 TAF9BQ9HBM6 251 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 SPACA1Q9HBV2 294 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 COMMD3Q9UBI1 195 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 RAB22AQ9UL26 194 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 TRAPPC2LQ9UL33 140 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 FLVCR2Q9UPI3 526 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 HILPDAQ9Y5L2 63 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 STAB1Q9NY15 2570 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 COL6A5A8TX70 2615 aa2.86□□□□□ -1.95
UPF3A-207ENST00000481131 ANK2Q01484 3957 aa2.85□□□□□ -1.95
UPF3A-207ENST00000481131 IGLV2-18A0A075B6J9 118 aa2.85□□□□□ -1.95
UPF3A-207ENST00000481131 IGHV6-1A0A0B4J1U7 121 aa2.85□□□□□ -1.95
UPF3A-207ENST00000481131 IGHV1-3A0A0C4DH29 117 aa2.85□□□□□ -1.95
UPF3A-207ENST00000481131 CCDC160A6NGH7 325 aa2.85□□□□□ -1.95
UPF3A-207ENST00000481131 LY6LH3BQJ8 138 aa2.85□□□□□ -1.95
UPF3A-207ENST00000481131 LGALS9O00182 355 aa2.85□□□□□ -1.95
UPF3A-207ENST00000481131 ORC5O43913 435 aa2.85□□□□□ -1.95
UPF3A-207ENST00000481131 FBP1P09467 338 aa2.85□□□□□ -1.95
UPF3A-207ENST00000481131 SCTP09683 121 aa2.85□□□□□ -1.95
UPF3A-207ENST00000481131 CD34P28906 385 aa2.85□□□□□ -1.95
UPF3A-207ENST00000481131 GALR1P47211 349 aa2.85□□□□□ -1.95
UPF3A-207ENST00000481131 PSMD7P51665 324 aa2.85□□□□□ -1.95
UPF3A-207ENST00000481131 UBE2NLQ5JXB2 153 aa2.85□□□□□ -1.95
UPF3A-207ENST00000481131 C6orf183Q5T699 404 aa2.85□□□□□ -1.95
UPF3A-207ENST00000481131 FAM222AQ5U5X8 452 aa2.85□□□□□ -1.95
UPF3A-207ENST00000481131 IGFL1Q6UW32 110 aa2.85□□□□□ -1.95
UPF3A-207ENST00000481131 SLC7A5P1Q8MH63 180 aa2.85□□□□□ -1.95
UPF3A-207ENST00000481131 SLC35G3Q8N808 338 aa2.85□□□□□ -1.95
UPF3A-207ENST00000481131 ZNF565Q8N9K5 539 aa2.85□□□□□ -1.95
UPF3A-207ENST00000481131 ST20-AS1Q8NBB2 130 aa2.85□□□□□ -1.95
UPF3A-207ENST00000481131 OR11H6Q8NGC7 330 aa2.85□□□□□ -1.95
UPF3A-207ENST00000481131 OR13D1Q8NGV5 346 aa2.85□□□□□ -1.95
UPF3A-207ENST00000481131 DYNC2LI1Q8TCX1 351 aa2.85□□□□□ -1.95
UPF3A-207ENST00000481131 ZNF418Q8TF45 676 aaPredicted RBP2.85□□□□□ -1.95
UPF3A-207ENST00000481131 RTN4IP1Q8WWV3 396 aaPredicted RBP2.85□□□□□ -1.95
UPF3A-207ENST00000481131 C20orf144Q9BQM9 153 aa2.85□□□□□ -1.95
UPF3A-207ENST00000481131 DCUN1D5Q9BTE7 237 aa2.85□□□□□ -1.95
UPF3A-207ENST00000481131 LINC00574Q9H8X3 128 aa2.85□□□□□ -1.95
UPF3A-207ENST00000481131 C12orf4Q9NQ89 552 aa2.85□□□□□ -1.95
UPF3A-207ENST00000481131 FAM25AB3EWG3 89 aa2.84□□□□□ -1.95
UPF3A-207ENST00000481131 FAM25CB3EWG5 89 aa2.84□□□□□ -1.95
UPF3A-207ENST00000481131 FAM25GB3EWG6 89 aa2.84□□□□□ -1.95
UPF3A-207ENST00000481131 ZNF736B4DX44 427 aaPredicted RBP2.84□□□□□ -1.95
UPF3A-207ENST00000481131 BUB1B-PAK6H3BSN5 160 aa2.84□□□□□ -1.95
UPF3A-207ENST00000481131 J3QRK9 145 aa2.84□□□□□ -1.95
UPF3A-207ENST00000481131 TOR1AO14656 332 aa2.84□□□□□ -1.95
UPF3A-207ENST00000481131 FABP7O15540 132 aa2.84□□□□□ -1.95
UPF3A-207ENST00000481131 SAA2P0DJI9 122 aaPredicted RBP2.84□□□□□ -1.95
UPF3A-207ENST00000481131 GZMHP20718 246 aa2.84□□□□□ -1.95
UPF3A-207ENST00000481131 TMBIM6P55061 237 aa2.84□□□□□ -1.95
UPF3A-207ENST00000481131 TAS2R20P59543 309 aa2.84□□□□□ -1.95
UPF3A-207ENST00000481131 GNG2P59768 71 aa2.84□□□□□ -1.95
UPF3A-207ENST00000481131 ACTG1P63261 375 aa2.84□□□□□ -1.95
UPF3A-207ENST00000481131 LRRC75BQ2VPJ9 315 aa2.84□□□□□ -1.95
UPF3A-207ENST00000481131 MORN2Q502X0 79 aa2.84□□□□□ -1.95
UPF3A-207ENST00000481131 LUZP6Q538Z0 58 aa2.84□□□□□ -1.95
UPF3A-207ENST00000481131 RPL39P5Q59GN2 51 aa2.84□□□□□ -1.95
UPF3A-207ENST00000481131 HACD4Q5VWC8 232 aa2.84□□□□□ -1.95
UPF3A-207ENST00000481131 SNX29P2Q8IUI4 249 aa2.84□□□□□ -1.95
UPF3A-207ENST00000481131 TEX29Q8N6K0 151 aa2.84□□□□□ -1.95
UPF3A-207ENST00000481131 OR10X1Q8NGY0 326 aa2.84□□□□□ -1.95
UPF3A-207ENST00000481131 RAB2BQ8WUD1 216 aa2.84□□□□□ -1.95
UPF3A-207ENST00000481131 GALMQ96C23 342 aa2.84□□□□□ -1.95
UPF3A-207ENST00000481131 RMI2Q96E14 147 aa2.84□□□□□ -1.95
UPF3A-207ENST00000481131 ABHD14BQ96IU4 210 aa2.84□□□□□ -1.95
UPF3A-207ENST00000481131 MRPL20Q9BYC9 149 aaKnown RBP2.84□□□□□ -1.95
UPF3A-207ENST00000481131 ABCG5Q9H222 651 aa2.84□□□□□ -1.95
UPF3A-207ENST00000481131 OR2S2Q9NQN1 319 aa2.84□□□□□ -1.95
UPF3A-207ENST00000481131 ABRACLQ9P1F3 81 aa2.84□□□□□ -1.95
UPF3A-207ENST00000481131 VPREB3Q9UKI3 123 aa2.84□□□□□ -1.95
UPF3A-207ENST00000481131 TBL2Q9Y4P3 447 aaKnown RBP2.84□□□□□ -1.95
UPF3A-207ENST00000481131 CMYA5Q8N3K9 4069 aa2.83□□□□□ -1.96
UPF3A-207ENST00000481131 TRBV6-7A0A0A0MS04 114 aa2.83□□□□□ -1.96
UPF3A-207ENST00000481131 TRAV8-4A0A0B4J246 113 aa2.83□□□□□ -1.96
UPF3A-207ENST00000481131 TRAV8-6A0A0B4J262 113 aa2.83□□□□□ -1.96
UPF3A-207ENST00000481131 LEUTXA8MZ59 168 aa2.83□□□□□ -1.96
UPF3A-207ENST00000481131 RGS5O15539 181 aa2.83□□□□□ -1.96
UPF3A-207ENST00000481131 YPEL1O60688 119 aa2.83□□□□□ -1.96
UPF3A-207ENST00000481131 P01737 135 aa2.83□□□□□ -1.96
UPF3A-207ENST00000481131 APOA1P02647 267 aa2.83□□□□□ -1.96
UPF3A-207ENST00000481131 NFYAP23511 347 aaPredicted RBP2.83□□□□□ -1.96
UPF3A-207ENST00000481131 IL3RAP26951 378 aa2.83□□□□□ -1.96
UPF3A-207ENST00000481131 CNTFRP26992 372 aa2.83□□□□□ -1.96
UPF3A-207ENST00000481131 MRPS15P82914 257 aaKnown RBP2.83□□□□□ -1.96
UPF3A-207ENST00000481131 Q3ZCU0 254 aa2.83□□□□□ -1.96
UPF3A-207ENST00000481131 TMEM69Q5SWH9 247 aa2.83□□□□□ -1.96
UPF3A-207ENST00000481131 DNLZQ5SXM8 178 aa2.83□□□□□ -1.96
UPF3A-207ENST00000481131 MINOS1Q5TGZ0 78 aa2.83□□□□□ -1.96
UPF3A-207ENST00000481131 LINC00311Q8N616 119 aa2.83□□□□□ -1.96
UPF3A-207ENST00000481131 SLC25A29Q8N8R3 303 aa2.83□□□□□ -1.96
UPF3A-207ENST00000481131 DRAXINQ8NBI3 349 aaPredicted RBP2.83□□□□□ -1.96
UPF3A-207ENST00000481131 OR1S1Q8NH92 325 aa2.83□□□□□ -1.96
UPF3A-207ENST00000481131 MALSU1Q96EH3 234 aa2.83□□□□□ -1.96
UPF3A-207ENST00000481131 S100A16Q96FQ6 103 aaKnown RBP2.83□□□□□ -1.96
UPF3A-207ENST00000481131 YPEL2Q96QA6 119 aa2.83□□□□□ -1.96
UPF3A-207ENST00000481131 ZNF251Q9BRH9 671 aa2.83□□□□□ -1.96
UPF3A-207ENST00000481131 MARVELD1Q9BSK0 173 aa2.83□□□□□ -1.96
UPF3A-207ENST00000481131 SCRT1Q9BWW7 348 aa2.83□□□□□ -1.96
UPF3A-207ENST00000481131 C6orf62Q9GZU0 229 aaPredicted RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms