RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 ZNF586Q9NXT0 402 aa9.2□□□□□ -0.94
SHROOM3-205ENST00000481002 UBQLN2Q9UHD9 624 aa9.2□□□□□ -0.94
SHROOM3-205ENST00000481002 UMAD1C9J7I0 102 aa9.19□□□□□ -0.94
SHROOM3-205ENST00000481002 ZNF253O75346 499 aa9.19□□□□□ -0.94
SHROOM3-205ENST00000481002 ZNF688P0C7X2 276 aa9.19□□□□□ -0.94
SHROOM3-205ENST00000481002 PYYP10082 97 aa9.19□□□□□ -0.94
SHROOM3-205ENST00000481002 DEFB131AP59861 70 aa9.19□□□□□ -0.94
SHROOM3-205ENST00000481002 SNRPD3P62318 126 aaKnown RBP9.19□□□□□ -0.94
SHROOM3-205ENST00000481002 LCN15Q6UWW0 184 aa9.19□□□□□ -0.94
SHROOM3-205ENST00000481002 PQLC2Q6ZP29 291 aa9.19□□□□□ -0.94
SHROOM3-205ENST00000481002 DEFB125Q8N687 156 aa9.19□□□□□ -0.94
SHROOM3-205ENST00000481002 RAB24Q969Q5 203 aa9.19□□□□□ -0.94
SHROOM3-205ENST00000481002 C16orf92Q96LL3 132 aa9.19□□□□□ -0.94
SHROOM3-205ENST00000481002 PAXXQ9BUH6 204 aa9.19□□□□□ -0.94
SHROOM3-205ENST00000481002 WFDC10AQ9H1F0 79 aa9.19□□□□□ -0.94
SHROOM3-205ENST00000481002 ZNF331Q9NQX6 463 aaPredicted RBP9.19□□□□□ -0.94
SHROOM3-205ENST00000481002 TRBV19A0A075B6N1 114 aa9.18□□□□□ -0.94
SHROOM3-205ENST00000481002 TRAV8-2A0A0B4J237 113 aa9.18□□□□□ -0.94
SHROOM3-205ENST00000481002 OR7C2O60412 319 aa9.18□□□□□ -0.94
SHROOM3-205ENST00000481002 NBEAP1P0C6P0 100 aa9.18□□□□□ -0.94
SHROOM3-205ENST00000481002 STAG3L2P0CL84 134 aa9.18□□□□□ -0.94
SHROOM3-205ENST00000481002 STAG3L3P0CL85 134 aa9.18□□□□□ -0.94
SHROOM3-205ENST00000481002 IGHV4-30-4P0DP06 118 aa9.18□□□□□ -0.94
SHROOM3-205ENST00000481002 PDE6HQ13956 83 aa9.18□□□□□ -0.94
SHROOM3-205ENST00000481002 ZNF726P1Q15940 193 aa9.18□□□□□ -0.94
SHROOM3-205ENST00000481002 EIF5AL1Q6IS14 154 aaKnown RBP9.18□□□□□ -0.94
SHROOM3-205ENST00000481002 MRAPQ8TCY5 172 aa9.18□□□□□ -0.94
SHROOM3-205ENST00000481002 RNF141Q8WVD5 230 aa9.18□□□□□ -0.94
SHROOM3-205ENST00000481002 TMED6Q8WW62 240 aa9.18□□□□□ -0.94
SHROOM3-205ENST00000481002 FXYD5Q96DB9 178 aa9.18□□□□□ -0.94
SHROOM3-205ENST00000481002 CITED4Q96RK1 184 aa9.18□□□□□ -0.94
SHROOM3-205ENST00000481002 SLC50A1Q9BRV3 221 aa9.18□□□□□ -0.94
SHROOM3-205ENST00000481002 CTXND1A0A1B0GTU2 59 aa9.17□□□□□ -0.94
SHROOM3-205ENST00000481002 SLC17A3O00476 420 aa9.17□□□□□ -0.94
SHROOM3-205ENST00000481002 EIF3GO75821 320 aaKnown RBP eCLIP9.17□□□□□ -0.94
SHROOM3-205ENST00000481002 NDUFB4O95168 129 aa9.17□□□□□ -0.94
SHROOM3-205ENST00000481002 SNRPCP09234 159 aaKnown RBP9.17□□□□□ -0.94
SHROOM3-205ENST00000481002 OR10J4P0C629 311 aa9.17□□□□□ -0.94
SHROOM3-205ENST00000481002 DEFB121Q5J5C9 76 aa9.17□□□□□ -0.94
SHROOM3-205ENST00000481002 PSMG4Q5JS54 123 aa9.17□□□□□ -0.94
SHROOM3-205ENST00000481002 SSX7Q7RTT5 188 aa9.17□□□□□ -0.94
SHROOM3-205ENST00000481002 APRG1Q8IVJ8 170 aa9.17□□□□□ -0.94
SHROOM3-205ENST00000481002 LRRC20Q8TCA0 184 aa9.17□□□□□ -0.94
SHROOM3-205ENST00000481002 CLEC5AQ9NY25 188 aa9.17□□□□□ -0.94
SHROOM3-205ENST00000481002 BOLA1Q9Y3E2 137 aa9.17□□□□□ -0.94
SHROOM3-205ENST00000481002 H3BTX0 84 aa9.16□□□□□ -0.94
SHROOM3-205ENST00000481002 BOLA2-SMG1P6H3BVE0 249 aa9.16□□□□□ -0.94
SHROOM3-205ENST00000481002 HMGB3O15347 200 aaKnown RBP9.16□□□□□ -0.94
SHROOM3-205ENST00000481002 ARL14EPLP0DKL9 152 aa9.16□□□□□ -0.94
SHROOM3-205ENST00000481002 ZNF124Q15973 351 aa9.16□□□□□ -0.94
SHROOM3-205ENST00000481002 PSG3Q16557 428 aa9.16□□□□□ -0.94
SHROOM3-205ENST00000481002 DPPA3Q6W0C5 159 aa9.16□□□□□ -0.94
SHROOM3-205ENST00000481002 LINC00322Q6ZN03 302 aaPredicted RBP9.16□□□□□ -0.94
SHROOM3-205ENST00000481002 SUN5Q8TC36 379 aa9.16□□□□□ -0.94
SHROOM3-205ENST00000481002 C20orf173Q96LM9 149 aa9.16□□□□□ -0.94
SHROOM3-205ENST00000481002 LINC00052Q96N35 136 aa9.16□□□□□ -0.94
SHROOM3-205ENST00000481002 TUBA4BQ9H853 241 aa9.16□□□□□ -0.94
SHROOM3-205ENST00000481002 SRD5A3Q9H8P0 318 aa9.16□□□□□ -0.94
SHROOM3-205ENST00000481002 RBMY1BA6NDE4 496 aaKnown RBP9.15□□□□□ -0.94
SHROOM3-205ENST00000481002 RBMY1EA6NEQ0 496 aaKnown RBP9.15□□□□□ -0.94
SHROOM3-205ENST00000481002 CXorf1O96002 111 aa9.15□□□□□ -0.94
SHROOM3-205ENST00000481002 RBMY1DP0C7P1 496 aaKnown RBP9.15□□□□□ -0.94
SHROOM3-205ENST00000481002 HLA-DMBP28068 263 aa9.15□□□□□ -0.94
SHROOM3-205ENST00000481002 FHITP49789 147 aa9.15□□□□□ -0.94
SHROOM3-205ENST00000481002 SULT1A2P50226 295 aa9.15□□□□□ -0.94
SHROOM3-205ENST00000481002 RAB5CP51148 216 aa9.15□□□□□ -0.94
SHROOM3-205ENST00000481002 UBE2L3P68036 154 aaKnown RBP9.15□□□□□ -0.94
SHROOM3-205ENST00000481002 PSG9Q00887 426 aa9.15□□□□□ -0.94
SHROOM3-205ENST00000481002 IGFL4Q6B9Z1 124 aa9.15□□□□□ -0.94
SHROOM3-205ENST00000481002 LYPD1Q8N2G4 141 aa9.15□□□□□ -0.94
SHROOM3-205ENST00000481002 RNF182Q8N6D2 247 aa9.15□□□□□ -0.94
SHROOM3-205ENST00000481002 BLNKQ8WV28 456 aa9.15□□□□□ -0.94
SHROOM3-205ENST00000481002 MBD3L1Q8WWY6 194 aa9.15□□□□□ -0.94
SHROOM3-205ENST00000481002 PHYHIPLQ96FC7 376 aa9.15□□□□□ -0.94
SHROOM3-205ENST00000481002 FRMD6-AS1P0C7T7 363 aa9.14□□□□□ -0.95
SHROOM3-205ENST00000481002 GCHFRP30047 84 aa9.14□□□□□ -0.95
SHROOM3-205ENST00000481002 FOXI2Q6ZQN5 318 aa9.14□□□□□ -0.95
SHROOM3-205ENST00000481002 LOC102724200A0A096LPH7 203 aaPredicted RBP9.13□□□□□ -0.95
SHROOM3-205ENST00000481002 MAP1LC3B2A6NCE7 125 aa9.13□□□□□ -0.95
SHROOM3-205ENST00000481002 KNCNA6PVL3 124 aa9.13□□□□□ -0.95
SHROOM3-205ENST00000481002 HLA-DRB4P13762 266 aa9.13□□□□□ -0.95
SHROOM3-205ENST00000481002 ACTL10Q5JWF8 245 aa9.13□□□□□ -0.95
SHROOM3-205ENST00000481002 ZNF738Q8NE65 137 aa9.13□□□□□ -0.95
SHROOM3-205ENST00000481002 FAM213BQ8TBF2 198 aa9.13□□□□□ -0.95
SHROOM3-205ENST00000481002 MRPL53Q96EL3 112 aaKnown RBP9.13□□□□□ -0.95
SHROOM3-205ENST00000481002 CLUHP3Q96NS8 147 aa9.13□□□□□ -0.95
SHROOM3-205ENST00000481002 MAP1LC3BQ9GZQ8 125 aa9.13□□□□□ -0.95
SHROOM3-205ENST00000481002 SAV1Q9H4B6 383 aaPredicted RBP9.13□□□□□ -0.95
SHROOM3-205ENST00000481002 TMEM167BQ9NRX6 74 aa9.13□□□□□ -0.95
SHROOM3-205ENST00000481002 PRELID1Q9Y255 219 aa9.13□□□□□ -0.95
SHROOM3-205ENST00000481002 HLA-DRB4X5D2U9 266 aa9.13□□□□□ -0.95
SHROOM3-205ENST00000481002 NBEAL2Q6ZNJ1 2754 aa9.12□□□□□ -0.95
SHROOM3-205ENST00000481002 A0A0J9YX75 114 aa9.12□□□□□ -0.95
SHROOM3-205ENST00000481002 ZNF705FA8MVS1 300 aaPredicted RBP9.12□□□□□ -0.95
SHROOM3-205ENST00000481002 H3BMM0 161 aa9.12□□□□□ -0.95
SHROOM3-205ENST00000481002 H2AFB1P0C5Y9 115 aa9.12□□□□□ -0.95
SHROOM3-205ENST00000481002 DEFB1P60022 68 aa9.12□□□□□ -0.95
SHROOM3-205ENST00000481002 RANP62826 216 aaKnown RBP9.12□□□□□ -0.95
SHROOM3-205ENST00000481002 ICAM4Q14773 271 aa9.12□□□□□ -0.95
SHROOM3-205ENST00000481002 GDF5OSQ5U4N7 250 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms