RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 DTD1Q8TEA8 209 aa7.78□□□□□ -1.16
TTC28-206ENST00000480563 TRGV9Q99603 122 aa7.78□□□□□ -1.16
TTC28-206ENST00000480563 RBKSQ9H477 322 aa7.78□□□□□ -1.16
TTC28-206ENST00000480563 GPR132Q9UNW8 380 aa7.78□□□□□ -1.16
TTC28-206ENST00000480563 CFDP00746 253 aaPredicted RBP7.77□□□□□ -1.17
TTC28-206ENST00000480563 IFNA5P01569 189 aa7.77□□□□□ -1.17
TTC28-206ENST00000480563 HOXA5P20719 270 aa7.77□□□□□ -1.17
TTC28-206ENST00000480563 ATP5IP56385 69 aaPredicted RBP7.77□□□□□ -1.17
TTC28-206ENST00000480563 KRTAP10-1P60331 282 aa7.77□□□□□ -1.17
TTC28-206ENST00000480563 ERVFC1-1P60608 527 aa7.77□□□□□ -1.17
TTC28-206ENST00000480563 FGL1Q08830 312 aa7.77□□□□□ -1.17
TTC28-206ENST00000480563 MZT2BQ6NZ67 158 aa7.77□□□□□ -1.17
TTC28-206ENST00000480563 ZNF493Q6ZR52 646 aa7.77□□□□□ -1.17
TTC28-206ENST00000480563 ZNF738Q8NE65 137 aa7.77□□□□□ -1.17
TTC28-206ENST00000480563 OR4D5Q8NGN0 318 aa7.77□□□□□ -1.17
TTC28-206ENST00000480563 PPP1R14DQ9NXH3 145 aa7.77□□□□□ -1.17
TTC28-206ENST00000480563 HSPB7Q9UBY9 170 aa7.77□□□□□ -1.17
TTC28-206ENST00000480563 TMEM56-RWDD3S4R434 201 aa7.77□□□□□ -1.17
TTC28-206ENST00000480563 IGKV1OR2-108A0A075B7D4 117 aa7.76□□□□□ -1.17
TTC28-206ENST00000480563 H3BNG1 76 aa7.76□□□□□ -1.17
TTC28-206ENST00000480563 FAM229AH3BQW9 127 aa7.76□□□□□ -1.17
TTC28-206ENST00000480563 J3QL48 77 aa7.76□□□□□ -1.17
TTC28-206ENST00000480563 LYRM1O43325 122 aa7.76□□□□□ -1.17
TTC28-206ENST00000480563 ADAP1O75689 374 aa7.76□□□□□ -1.17
TTC28-206ENST00000480563 VAMP1P23763 118 aa7.76□□□□□ -1.17
TTC28-206ENST00000480563 CCR6P51684 374 aa7.76□□□□□ -1.17
TTC28-206ENST00000480563 UBE2MP61081 183 aaKnown RBP7.76□□□□□ -1.17
TTC28-206ENST00000480563 HIST1H1AQ02539 215 aaPredicted RBP7.76□□□□□ -1.17
TTC28-206ENST00000480563 TMEM128Q5BJH2 165 aa7.76□□□□□ -1.17
TTC28-206ENST00000480563 GGNBP1Q5YKI7 109 aa7.76□□□□□ -1.17
TTC28-206ENST00000480563 THAP8Q8NA92 274 aa7.76□□□□□ -1.17
TTC28-206ENST00000480563 RNASE8Q8TDE3 154 aaKnown RBP7.76□□□□□ -1.17
TTC28-206ENST00000480563 TMEM263Q8WUH6 116 aaKnown RBP7.76□□□□□ -1.17
TTC28-206ENST00000480563 IL22RA2Q969J5 263 aa7.76□□□□□ -1.17
TTC28-206ENST00000480563 GPR82Q96P67 336 aa7.76□□□□□ -1.17
TTC28-206ENST00000480563 SDHCQ99643 169 aaPredicted RBP7.76□□□□□ -1.17
TTC28-206ENST00000480563 SLC45A2Q9UMX9 530 aa7.76□□□□□ -1.17
TTC28-206ENST00000480563 GAGE12BA1L429 117 aa7.75□□□□□ -1.17
TTC28-206ENST00000480563 GAGE7O76087 117 aa7.75□□□□□ -1.17
TTC28-206ENST00000480563 NDUFB6O95139 128 aa7.75□□□□□ -1.17
TTC28-206ENST00000480563 GAGE12FP0CL80 117 aa7.75□□□□□ -1.17
TTC28-206ENST00000480563 GAGE12GP0CL81 117 aa7.75□□□□□ -1.17
TTC28-206ENST00000480563 GAGE12IP0CL82 117 aa7.75□□□□□ -1.17
TTC28-206ENST00000480563 ORM2P19652 201 aa7.75□□□□□ -1.17
TTC28-206ENST00000480563 DEFA1P59665 94 aa7.75□□□□□ -1.17
TTC28-206ENST00000480563 DEFA3P59666 94 aa7.75□□□□□ -1.17
TTC28-206ENST00000480563 ICAM4Q14773 271 aa7.75□□□□□ -1.17
TTC28-206ENST00000480563 SMCO1Q147U7 214 aa7.75□□□□□ -1.17
TTC28-206ENST00000480563 LINC00612Q8N6U2 182 aa7.75□□□□□ -1.17
TTC28-206ENST00000480563 OR8A1Q8NGG7 326 aa7.75□□□□□ -1.17
TTC28-206ENST00000480563 PRR13Q9NZ81 148 aa7.75□□□□□ -1.17
TTC28-206ENST00000480563 DUXBA0A1W2PPF3 345 aa7.74□□□□□ -1.17
TTC28-206ENST00000480563 H7BYZ3 331 aa7.74□□□□□ -1.17
TTC28-206ENST00000480563 SIVA1O15304 175 aa7.74□□□□□ -1.17
TTC28-206ENST00000480563 UPK1BO75841 260 aa7.74□□□□□ -1.17
TTC28-206ENST00000480563 GATA2P23769 480 aaPredicted RBP7.74□□□□□ -1.17
TTC28-206ENST00000480563 CDKN1BP46527 198 aa7.74□□□□□ -1.17
TTC28-206ENST00000480563 RAB11AP62491 216 aa7.74□□□□□ -1.17
TTC28-206ENST00000480563 CCDC28AQ8IWP9 274 aa7.74□□□□□ -1.17
TTC28-206ENST00000480563 ENKURQ8TC29 256 aa7.74□□□□□ -1.17
TTC28-206ENST00000480563 TMEM147Q9BVK8 224 aa7.74□□□□□ -1.17
TTC28-206ENST00000480563 TNFRSF18Q9Y5U5 241 aa7.74□□□□□ -1.17
TTC28-206ENST00000480563 A0A087WTM6 91 aa7.73□□□□□ -1.17
TTC28-206ENST00000480563 A0A096LPF7 62 aa7.73□□□□□ -1.17
TTC28-206ENST00000480563 FAM240BA0A1B0GVZ2 78 aa7.73□□□□□ -1.17
TTC28-206ENST00000480563 SFT2D2O95562 160 aa7.73□□□□□ -1.17
TTC28-206ENST00000480563 RLN2P04090 185 aa7.73□□□□□ -1.17
TTC28-206ENST00000480563 PRB4P10163 310 aaPredicted RBP7.73□□□□□ -1.17
TTC28-206ENST00000480563 S100A7P31151 101 aa7.73□□□□□ -1.17
TTC28-206ENST00000480563 C4orf46Q504U0 113 aa7.73□□□□□ -1.17
TTC28-206ENST00000480563 TMEM182Q6ZP80 229 aaPredicted RBP7.73□□□□□ -1.17
TTC28-206ENST00000480563 LYZL2Q7Z4W2 148 aa7.73□□□□□ -1.17
TTC28-206ENST00000480563 BPIFCQ8NFQ6 507 aa7.73□□□□□ -1.17
TTC28-206ENST00000480563 C20orf85Q9H1P6 137 aa7.73□□□□□ -1.17
TTC28-206ENST00000480563 PAIP2BQ9ULR5 123 aaKnown RBP7.73□□□□□ -1.17
TTC28-206ENST00000480563 A0A0B4J2A0 478 aa7.72□□□□□ -1.17
TTC28-206ENST00000480563 DNAH10OSP0CZ25 163 aa7.72□□□□□ -1.17
TTC28-206ENST00000480563 CXCL3P19876 107 aa7.72□□□□□ -1.17
TTC28-206ENST00000480563 GCSHP23434 173 aa7.72□□□□□ -1.17
TTC28-206ENST00000480563 ASAH1Q13510 395 aa7.72□□□□□ -1.17
TTC28-206ENST00000480563 PPP1R1AQ13522 171 aa7.72□□□□□ -1.17
TTC28-206ENST00000480563 PSG3Q16557 428 aa7.72□□□□□ -1.17
TTC28-206ENST00000480563 Q6ZSN1 163 aa7.72□□□□□ -1.17
TTC28-206ENST00000480563 OR1S1Q8NH92 325 aa7.72□□□□□ -1.17
TTC28-206ENST00000480563 VSIG2Q96IQ7 327 aa7.72□□□□□ -1.17
TTC28-206ENST00000480563 SHPKQ9UHJ6 478 aa7.72□□□□□ -1.17
TTC28-206ENST00000480563 SNURFLB1AK76 121 aa7.71□□□□□ -1.18
TTC28-206ENST00000480563 IAPPP10997 89 aa7.71□□□□□ -1.18
TTC28-206ENST00000480563 RPL7P18124 248 aaKnown RBP7.71□□□□□ -1.18
TTC28-206ENST00000480563 BTCP35070 178 aa7.71□□□□□ -1.18
TTC28-206ENST00000480563 HAMPP81172 84 aa7.71□□□□□ -1.18
TTC28-206ENST00000480563 KIR3DS1Q14943 382 aa7.71□□□□□ -1.18
TTC28-206ENST00000480563 NFE4Q86UQ8 179 aa7.71□□□□□ -1.18
TTC28-206ENST00000480563 LRRC20Q8TCA0 184 aa7.71□□□□□ -1.18
TTC28-206ENST00000480563 RPUSD4Q96CM3 377 aaKnown RBP7.71□□□□□ -1.18
TTC28-206ENST00000480563 C20orf144Q9BQM9 153 aa7.71□□□□□ -1.18
TTC28-206ENST00000480563 TMPRSS5Q9H3S3 457 aa7.71□□□□□ -1.18
TTC28-206ENST00000480563 UBR4Q5T4S7 5183 aa7.7□□□□□ -1.18
TTC28-206ENST00000480563 H3BRN7 92 aa7.7□□□□□ -1.18
TTC28-206ENST00000480563 PLA2G10O15496 165 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms