RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 ITPR3Q14573 2671 aa8.47□□□□□ -1.05
VTI1A-204ENST00000480057 IGHV3-35A0A0C4DH35 117 aa8.46□□□□□ -1.06
VTI1A-204ENST00000480057 PGPEP1LA6NFU8 196 aa8.46□□□□□ -1.06
VTI1A-204ENST00000480057 DNAJC9-AS1A6NH13 148 aa8.46□□□□□ -1.06
VTI1A-204ENST00000480057 LTAP01374 205 aa8.46□□□□□ -1.06
VTI1A-204ENST00000480057 TRBV12-3P01733 135 aa8.46□□□□□ -1.06
VTI1A-204ENST00000480057 CRYBA1P05813 215 aa8.46□□□□□ -1.06
VTI1A-204ENST00000480057 LGALS1P09382 135 aaKnown RBP8.46□□□□□ -1.06
VTI1A-204ENST00000480057 GNG5P63218 68 aa8.46□□□□□ -1.06
VTI1A-204ENST00000480057 C16orf54Q6UWD8 224 aa8.46□□□□□ -1.06
VTI1A-204ENST00000480057 IL17RELQ6ZVW7 336 aa8.46□□□□□ -1.06
VTI1A-204ENST00000480057 EXOC3-AS1Q8N2X6 119 aa8.46□□□□□ -1.06
VTI1A-204ENST00000480057 WFDC12Q8WWY7 111 aa8.46□□□□□ -1.06
VTI1A-204ENST00000480057 MRPL53Q96EL3 112 aaKnown RBP8.46□□□□□ -1.06
VTI1A-204ENST00000480057 ZNF331Q9NQX6 463 aaPredicted RBP8.46□□□□□ -1.06
VTI1A-204ENST00000480057 SERTAD4Q9NUC0 356 aa8.46□□□□□ -1.06
VTI1A-204ENST00000480057 SMAD5-AS1Q9Y6J3 95 aa8.46□□□□□ -1.06
VTI1A-204ENST00000480057 ZNF785A8K8V0 405 aa8.45□□□□□ -1.06
VTI1A-204ENST00000480057 C1orf196B1AJZ1 125 aa8.45□□□□□ -1.06
VTI1A-204ENST00000480057 DIRC3C9JPN6 131 aa8.45□□□□□ -1.06
VTI1A-204ENST00000480057 H3BTX0 84 aa8.45□□□□□ -1.06
VTI1A-204ENST00000480057 SLC17A3O00476 420 aa8.45□□□□□ -1.06
VTI1A-204ENST00000480057 IGHV3-11P01762 117 aa8.45□□□□□ -1.06
VTI1A-204ENST00000480057 BMI1P35226 326 aa8.45□□□□□ -1.06
VTI1A-204ENST00000480057 FLI1Q01543 452 aaPredicted RBP8.45□□□□□ -1.06
VTI1A-204ENST00000480057 FAM106AQ4KMX7 169 aa8.45□□□□□ -1.06
VTI1A-204ENST00000480057 GLMPQ8WWB7 406 aa8.45□□□□□ -1.06
VTI1A-204ENST00000480057 FAM210BQ96KR6 192 aa8.45□□□□□ -1.06
VTI1A-204ENST00000480057 C17orf77Q96MU5 243 aa8.45□□□□□ -1.06
VTI1A-204ENST00000480057 MLST8Q9BVC4 326 aa8.45□□□□□ -1.06
VTI1A-204ENST00000480057 IL36BQ9NZH7 164 aa8.45□□□□□ -1.06
VTI1A-204ENST00000480057 ZFP30Q9Y2G7 519 aa8.45□□□□□ -1.06
VTI1A-204ENST00000480057 UFC1Q9Y3C8 167 aa8.45□□□□□ -1.06
VTI1A-204ENST00000480057 CSMD2Q7Z408 3487 aa8.45□□□□□ -1.06
VTI1A-204ENST00000480057 TGIF2-C20orf24A0A0A6YYL0 155 aa8.44□□□□□ -1.06
VTI1A-204ENST00000480057 TYMSP04818 313 aa8.44□□□□□ -1.06
VTI1A-204ENST00000480057 RNASE1P07998 156 aaKnown RBP8.44□□□□□ -1.06
VTI1A-204ENST00000480057 SNRPCP09234 159 aaKnown RBP8.44□□□□□ -1.06
VTI1A-204ENST00000480057 CXCL1P09341 107 aa8.44□□□□□ -1.06
VTI1A-204ENST00000480057 FOSL1P15407 271 aa8.44□□□□□ -1.06
VTI1A-204ENST00000480057 ERVFC1-1P60608 527 aa8.44□□□□□ -1.06
VTI1A-204ENST00000480057 RAB5BP61020 215 aa8.44□□□□□ -1.06
VTI1A-204ENST00000480057 PSG3Q16557 428 aa8.44□□□□□ -1.06
VTI1A-204ENST00000480057 SAMD13Q5VXD3 122 aa8.44□□□□□ -1.06
VTI1A-204ENST00000480057 GOLT1AQ6ZVE7 132 aa8.44□□□□□ -1.06
VTI1A-204ENST00000480057 REC114Q7Z4M0 266 aa8.44□□□□□ -1.06
VTI1A-204ENST00000480057 Q86TA4 180 aa8.44□□□□□ -1.06
VTI1A-204ENST00000480057 TMEM183AQ8IXX5 376 aa8.44□□□□□ -1.06
VTI1A-204ENST00000480057 LINC00479Q96M42 142 aa8.44□□□□□ -1.06
VTI1A-204ENST00000480057 DAZ1Q9NQZ3 744 aaKnown RBP8.44□□□□□ -1.06
VTI1A-204ENST00000480057 AURKAIP1Q9NWT8 199 aaPredicted RBP8.44□□□□□ -1.06
VTI1A-204ENST00000480057 ZNF492Q9P255 531 aa8.44□□□□□ -1.06
VTI1A-204ENST00000480057 MLXQ9UH92 298 aa8.44□□□□□ -1.06
VTI1A-204ENST00000480057 URGCP-MRPS24S4R325 110 aa8.44□□□□□ -1.06
VTI1A-204ENST00000480057 V9GYV3 84 aa8.44□□□□□ -1.06
VTI1A-204ENST00000480057 TRAV34A0A0B4J273 112 aa8.43□□□□□ -1.06
VTI1A-204ENST00000480057 IGHV7-4-1A0A0J9YVY3 117 aa8.43□□□□□ -1.06
VTI1A-204ENST00000480057 RBAKDNA6NC62 111 aa8.43□□□□□ -1.06
VTI1A-204ENST00000480057 LGALS9O00182 355 aa8.43□□□□□ -1.06
VTI1A-204ENST00000480057 IGLV2-11P01706 119 aa8.43□□□□□ -1.06
VTI1A-204ENST00000480057 RPLP1P05386 114 aaKnown RBP8.43□□□□□ -1.06
VTI1A-204ENST00000480057 MGST1P10620 155 aaKnown RBP8.43□□□□□ -1.06
VTI1A-204ENST00000480057 RPL19P84098 196 aaKnown RBP8.43□□□□□ -1.06
VTI1A-204ENST00000480057 IBA57Q5T440 356 aaKnown RBP8.43□□□□□ -1.06
VTI1A-204ENST00000480057 UNQ9165/PRO28630Q6UXU0 137 aa8.43□□□□□ -1.06
VTI1A-204ENST00000480057 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.43□□□□□ -1.06
VTI1A-204ENST00000480057 COX8CQ7Z4L0 72 aa8.43□□□□□ -1.06
VTI1A-204ENST00000480057 ZNF418Q8TF45 676 aaPredicted RBP8.43□□□□□ -1.06
VTI1A-204ENST00000480057 JMJD8Q96S16 334 aa8.43□□□□□ -1.06
VTI1A-204ENST00000480057 C16orf95Q9H693 158 aa8.43□□□□□ -1.06
VTI1A-204ENST00000480057 SRD5A3Q9H8P0 318 aa8.43□□□□□ -1.06
VTI1A-204ENST00000480057 RPH3ALQ9UNE2 315 aa8.43□□□□□ -1.06
VTI1A-204ENST00000480057 GCN1Q92616 2671 aaKnown RBP8.42□□□□□ -1.06
VTI1A-204ENST00000480057 IGHV3OR16-8A0A075B7F1 116 aa8.42□□□□□ -1.06
VTI1A-204ENST00000480057 FAM181BA6NEQ2 426 aa8.42□□□□□ -1.06
VTI1A-204ENST00000480057 A8MWP6 167 aa8.42□□□□□ -1.06
VTI1A-204ENST00000480057 APOHP02749 345 aaPredicted RBP8.42□□□□□ -1.06
VTI1A-204ENST00000480057 SRD5A1P18405 259 aa8.42□□□□□ -1.06
VTI1A-204ENST00000480057 RPS10P46783 165 aaKnown RBP8.42□□□□□ -1.06
VTI1A-204ENST00000480057 CDX1P47902 265 aaPredicted RBP8.42□□□□□ -1.06
VTI1A-204ENST00000480057 FAM3BP58499 235 aaPredicted RBP8.42□□□□□ -1.06
VTI1A-204ENST00000480057 OR5I1Q13606 314 aa8.42□□□□□ -1.06
VTI1A-204ENST00000480057 CT83Q5H943 113 aa8.42□□□□□ -1.06
VTI1A-204ENST00000480057 LCNL1Q6ZST4 164 aa8.42□□□□□ -1.06
VTI1A-204ENST00000480057 Q6ZSV7 163 aa8.42□□□□□ -1.06
VTI1A-204ENST00000480057 KLHDC1Q8N7A1 406 aa8.42□□□□□ -1.06
VTI1A-204ENST00000480057 ESM1Q9NQ30 184 aa8.42□□□□□ -1.06
VTI1A-204ENST00000480057 PSG8Q9UQ74 426 aa8.42□□□□□ -1.06
VTI1A-204ENST00000480057 ZANQ9Y493 2812 aa8.41□□□□□ -1.06
VTI1A-204ENST00000480057 NBPF19A0A087WUL8 3843 aa8.41□□□□□ -1.06
VTI1A-204ENST00000480057 M0R3E3 92 aa8.41□□□□□ -1.06
VTI1A-204ENST00000480057 CHEK1O14757 476 aa8.41□□□□□ -1.06
VTI1A-204ENST00000480057 HILS1P60008 231 aa8.41□□□□□ -1.06
VTI1A-204ENST00000480057 RPEL1Q2QD12 228 aa8.41□□□□□ -1.06
VTI1A-204ENST00000480057 SAPCD1Q5SSQ6 148 aa8.41□□□□□ -1.06
VTI1A-204ENST00000480057 C10orf99Q6UWK7 81 aa8.41□□□□□ -1.06
VTI1A-204ENST00000480057 OR4B1Q8NGF8 309 aa8.41□□□□□ -1.06
VTI1A-204ENST00000480057 WIPF2Q8TF74 440 aaPredicted RBP8.41□□□□□ -1.06
VTI1A-204ENST00000480057 SMPXQ9UHP9 88 aa8.41□□□□□ -1.06
VTI1A-204ENST00000480057 TEX15Q9BXT5 2789 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms