RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 GTSF1LQ9H1H1 148 aa10.72□□□□□ -0.69
C9orf78-205ENST00000480023 NGBQ9NPG2 151 aa10.72□□□□□ -0.69
C9orf78-205ENST00000480023 SPANXB1Q9NS25 103 aaPredicted RBP10.72□□□□□ -0.69
C9orf78-205ENST00000480023 DKK2Q9UBU2 259 aa10.72□□□□□ -0.69
C9orf78-205ENST00000480023 HHLA3Q9XRX5 114 aa10.72□□□□□ -0.69
C9orf78-205ENST00000480023 F11RQ9Y624 299 aaKnown RBP10.72□□□□□ -0.69
C9orf78-205ENST00000480023 HLA-DRB4X5D2U9 266 aa10.72□□□□□ -0.69
C9orf78-205ENST00000480023 CADP27708 2225 aa10.71□□□□□ -0.69
C9orf78-205ENST00000480023 TMEM213A2RRL7 107 aa10.71□□□□□ -0.69
C9orf78-205ENST00000480023 GAGE12HA6NDE8 117 aa10.71□□□□□ -0.69
C9orf78-205ENST00000480023 FBLL1A6NHQ2 334 aaKnown RBP10.71□□□□□ -0.69
C9orf78-205ENST00000480023 J3QR89 54 aa10.71□□□□□ -0.69
C9orf78-205ENST00000480023 M0R1B8 84 aa10.71□□□□□ -0.69
C9orf78-205ENST00000480023 GCSHP23434 173 aa10.71□□□□□ -0.69
C9orf78-205ENST00000480023 RPL27AP46776 148 aaKnown RBP10.71□□□□□ -0.69
C9orf78-205ENST00000480023 TCTAP57738 103 aa10.71□□□□□ -0.69
C9orf78-205ENST00000480023 SRSF1Q07955 248 aaKnown RBP eCLIP10.71□□□□□ -0.69
C9orf78-205ENST00000480023 CHAC1Q9BUX1 264 aa10.71□□□□□ -0.69
C9orf78-205ENST00000480023 SERTM2A0A1B0GWG4 89 aa10.7□□□□□ -0.7
C9orf78-205ENST00000480023 E9PLD3 99 aa10.7□□□□□ -0.7
C9orf78-205ENST00000480023 GOSR1O95249 250 aa10.7□□□□□ -0.7
C9orf78-205ENST00000480023 LINC01559Q495D7 138 aa10.7□□□□□ -0.7
C9orf78-205ENST00000480023 DHRS13Q6UX07 377 aa10.7□□□□□ -0.7
C9orf78-205ENST00000480023 COX8CQ7Z4L0 72 aa10.7□□□□□ -0.7
C9orf78-205ENST00000480023 TDHQ8IZJ6 230 aa10.7□□□□□ -0.7
C9orf78-205ENST00000480023 C18orf15Q96N68 181 aa10.7□□□□□ -0.7
C9orf78-205ENST00000480023 SHANK2-AS3Q9BTD1 123 aa10.7□□□□□ -0.7
C9orf78-205ENST00000480023 TPPP3Q9BW30 176 aa10.7□□□□□ -0.7
C9orf78-205ENST00000480023 PLXNB1O43157 2135 aa10.7□□□□□ -0.7
C9orf78-205ENST00000480023 CRYGBP07316 175 aa10.7□□□□□ -0.7
C9orf78-205ENST00000480023 ZNF883P0CG24 379 aa10.7□□□□□ -0.7
C9orf78-205ENST00000480023 SMAGPQ0VAQ4 97 aa10.7□□□□□ -0.7
C9orf78-205ENST00000480023 ODF1Q14990 250 aa10.7□□□□□ -0.7
C9orf78-205ENST00000480023 TMEM200BQ69YZ2 307 aa10.7□□□□□ -0.7
C9orf78-205ENST00000480023 ATP6V0BQ99437 205 aa10.7□□□□□ -0.7
C9orf78-205ENST00000480023 IGKV2D-26A0A0A0MRZ7 120 aa10.69□□□□□ -0.7
C9orf78-205ENST00000480023 H3BRN7 92 aa10.69□□□□□ -0.7
C9orf78-205ENST00000480023 NPYP01303 97 aa10.69□□□□□ -0.7
C9orf78-205ENST00000480023 TM4SF20Q53R12 229 aa10.69□□□□□ -0.7
C9orf78-205ENST00000480023 ZNF562Q6V9R5 426 aa10.69□□□□□ -0.7
C9orf78-205ENST00000480023 TSSC4Q9Y5U2 329 aaPredicted RBP10.69□□□□□ -0.7
C9orf78-205ENST00000480023 IGHV3-21A0A0B4J1V1 117 aa10.69□□□□□ -0.7
C9orf78-205ENST00000480023 FCN3O75636 299 aa10.69□□□□□ -0.7
C9orf78-205ENST00000480023 EVI2AP22794 236 aa10.69□□□□□ -0.7
C9orf78-205ENST00000480023 FXYD7P58549 80 aa10.69□□□□□ -0.7
C9orf78-205ENST00000480023 CEND1Q8N111 149 aa10.69□□□□□ -0.7
C9orf78-205ENST00000480023 A0A1W2PRD5 423 aa10.68□□□□□ -0.7
C9orf78-205ENST00000480023 A0A1W2PRF3 423 aa10.68□□□□□ -0.7
C9orf78-205ENST00000480023 A0A1W2PRM7 423 aa10.68□□□□□ -0.7
C9orf78-205ENST00000480023 MRPS12O15235 138 aaKnown RBP10.68□□□□□ -0.7
C9orf78-205ENST00000480023 CKS2P33552 79 aa10.68□□□□□ -0.7
C9orf78-205ENST00000480023 ATP1A1-AS1Q5TC04 95 aa10.68□□□□□ -0.7
C9orf78-205ENST00000480023 C17orf77Q96MU5 243 aa10.68□□□□□ -0.7
C9orf78-205ENST00000480023 TMEM133Q9H2Q1 129 aa10.68□□□□□ -0.7
C9orf78-205ENST00000480023 TRBV25-1A0A075B6N4 114 aa10.67□□□□□ -0.7
C9orf78-205ENST00000480023 I3L2K1 104 aa10.67□□□□□ -0.7
C9orf78-205ENST00000480023 K7ERJ3 54 aa10.67□□□□□ -0.7
C9orf78-205ENST00000480023 IGKV1-17P01599 117 aa10.67□□□□□ -0.7
C9orf78-205ENST00000480023 C8orf49Q96NF6 230 aa10.67□□□□□ -0.7
C9orf78-205ENST00000480023 RASL11BQ9BPW5 248 aa10.67□□□□□ -0.7
C9orf78-205ENST00000480023 TEX22C9J3V5 150 aa10.67□□□□□ -0.7
C9orf78-205ENST00000480023 ZNF207O43670 478 aaKnown RBP10.67□□□□□ -0.7
C9orf78-205ENST00000480023 CEACAM4O75871 244 aa10.67□□□□□ -0.7
C9orf78-205ENST00000480023 TAL2Q16559 108 aa10.67□□□□□ -0.7
C9orf78-205ENST00000480023 ASCL2Q99929 193 aa10.67□□□□□ -0.7
C9orf78-205ENST00000480023 IGLL5B9A064 214 aa10.66□□□□□ -0.7
C9orf78-205ENST00000480023 SH2D1AO60880 128 aa10.66□□□□□ -0.7
C9orf78-205ENST00000480023 PDE6HQ13956 83 aa10.66□□□□□ -0.7
C9orf78-205ENST00000480023 TCTEX1D4Q5JR98 221 aa10.66□□□□□ -0.7
C9orf78-205ENST00000480023 SIGLEC9Q9Y336 463 aa10.66□□□□□ -0.7
C9orf78-205ENST00000480023 TMEM238LA0A1B0GVL6 79 aa10.66□□□□□ -0.7
C9orf78-205ENST00000480023 MBD3L4A6NDZ8 208 aaPredicted RBP10.66□□□□□ -0.7
C9orf78-205ENST00000480023 MBD3L3A6NE82 208 aaPredicted RBP10.66□□□□□ -0.7
C9orf78-205ENST00000480023 MBD3L5A6NJ08 208 aaPredicted RBP10.66□□□□□ -0.7
C9orf78-205ENST00000480023 IGKCP01834 107 aa10.66□□□□□ -0.7
C9orf78-205ENST00000480023 FCER1GP30273 86 aa10.66□□□□□ -0.7
C9orf78-205ENST00000480023 DLX6P56179 175 aa10.66□□□□□ -0.7
C9orf78-205ENST00000480023 WFDC2Q14508 124 aa10.66□□□□□ -0.7
C9orf78-205ENST00000480023 CCDC144NLQ6NUI1 221 aa10.66□□□□□ -0.7
C9orf78-205ENST00000480023 MBD3L2Q8NHZ7 208 aaPredicted RBP10.66□□□□□ -0.7
C9orf78-205ENST00000480023 NHP2Q9NX24 153 aaKnown RBP10.66□□□□□ -0.7
C9orf78-205ENST00000480023 IGLC6P0CF74 106 aa10.65□□□□□ -0.7
C9orf78-205ENST00000480023 WT1P19544 449 aaPredicted RBP10.65□□□□□ -0.7
C9orf78-205ENST00000480023 SEM1Q6ZVN7 128 aa10.65□□□□□ -0.7
C9orf78-205ENST00000480023 ZNF502Q8TBZ5 544 aa10.65□□□□□ -0.7
C9orf78-205ENST00000480023 MAP1LC3AQ9H492 121 aa10.65□□□□□ -0.7
C9orf78-205ENST00000480023 PLCE1Q9P212 2302 aa10.65□□□□□ -0.7
C9orf78-205ENST00000480023 SMKR1H3BMG3 65 aa10.64□□□□□ -0.71
C9orf78-205ENST00000480023 M0R3E3 92 aa10.64□□□□□ -0.71
C9orf78-205ENST00000480023 PLGLAQ15195 96 aa10.64□□□□□ -0.71
C9orf78-205ENST00000480023 ZNF474Q6S9Z5 364 aaPredicted RBP10.64□□□□□ -0.71
C9orf78-205ENST00000480023 ZNF479Q96JC4 524 aa10.64□□□□□ -0.71
C9orf78-205ENST00000480023 CLUHP3Q96NS8 147 aa10.64□□□□□ -0.71
C9orf78-205ENST00000480023 SPAG8Q99932 426 aaPredicted RBP10.64□□□□□ -0.71
C9orf78-205ENST00000480023 CNFNQ9BYD5 112 aa10.64□□□□□ -0.71
C9orf78-205ENST00000480023 TTTY13Q9BZ97 58 aa10.64□□□□□ -0.71
C9orf78-205ENST00000480023 NXT2Q9NPJ8 142 aaKnown RBP10.64□□□□□ -0.71
C9orf78-205ENST00000480023 DMDP11532 3685 aa10.64□□□□□ -0.71
C9orf78-205ENST00000480023 DSPP15924 2871 aaKnown RBP10.64□□□□□ -0.71
C9orf78-205ENST00000480023 ENSAO43768 121 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms