RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 KHDC3LQ587J8 217 aa6.62□□□□□ -1.35
DDX56-211ENST00000479602 TMEM41BQ5BJD5 291 aa6.62□□□□□ -1.35
DDX56-211ENST00000479602 GTSCR1Q86UQ5 136 aa6.62□□□□□ -1.35
DDX56-211ENST00000479602 OR8I2Q8N0Y5 310 aa6.62□□□□□ -1.35
DDX56-211ENST00000479602 RSG1Q9BU20 258 aa6.62□□□□□ -1.35
DDX56-211ENST00000479602 PBDC1Q9BVG4 233 aa6.62□□□□□ -1.35
DDX56-211ENST00000479602 SCRT1Q9BWW7 348 aa6.62□□□□□ -1.35
DDX56-211ENST00000479602 MS4A6AQ9H2W1 248 aa6.62□□□□□ -1.35
DDX56-211ENST00000479602 EDN2P20800 178 aa6.61□□□□□ -1.35
DDX56-211ENST00000479602 SNRPD3P62318 126 aaKnown RBP6.61□□□□□ -1.35
DDX56-211ENST00000479602 ODF3L2Q3SX64 289 aa6.61□□□□□ -1.35
DDX56-211ENST00000479602 FFAR4Q5NUL3 377 aa6.61□□□□□ -1.35
DDX56-211ENST00000479602 FAM78BQ5VT40 261 aa6.61□□□□□ -1.35
DDX56-211ENST00000479602 RPP25LQ8N5L8 163 aaKnown RBP6.61□□□□□ -1.35
DDX56-211ENST00000479602 SAT2Q96F10 170 aaPredicted RBP6.61□□□□□ -1.35
DDX56-211ENST00000479602 UHRF2Q96PU4 802 aa6.61□□□□□ -1.35
DDX56-211ENST00000479602 TCEAL7Q9BRU2 100 aa6.61□□□□□ -1.35
DDX56-211ENST00000479602 SMIM3Q9BZL3 60 aa6.61□□□□□ -1.35
DDX56-211ENST00000479602 TRAV1-1A0A0B4J248 108 aa6.6□□□□□ -1.35
DDX56-211ENST00000479602 KIR2DL5BA0A0G2JN68 375 aa6.6□□□□□ -1.35
DDX56-211ENST00000479602 KIR2DL5BA0A0G2JPC4 375 aa6.6□□□□□ -1.35
DDX56-211ENST00000479602 CTXND1A0A1B0GTU2 59 aa6.6□□□□□ -1.35
DDX56-211ENST00000479602 IZUMO1RA6ND01 250 aa6.6□□□□□ -1.35
DDX56-211ENST00000479602 ID1P41134 155 aa6.6□□□□□ -1.35
DDX56-211ENST00000479602 CDC34P49427 236 aaPredicted RBP6.6□□□□□ -1.35
DDX56-211ENST00000479602 HAGHQ16775 308 aa6.6□□□□□ -1.35
DDX56-211ENST00000479602 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.6□□□□□ -1.35
DDX56-211ENST00000479602 KIR2DL5AQ8N109 375 aa6.6□□□□□ -1.35
DDX56-211ENST00000479602 HSD17B11Q8NBQ5 300 aa6.6□□□□□ -1.35
DDX56-211ENST00000479602 KIR2DL5BQ8NHK3 375 aa6.6□□□□□ -1.35
DDX56-211ENST00000479602 ZNF471Q9BX82 626 aaPredicted RBP6.6□□□□□ -1.35
DDX56-211ENST00000479602 SLC25A2Q9BXI2 301 aa6.6□□□□□ -1.35
DDX56-211ENST00000479602 ZMAT4Q9H898 229 aa6.6□□□□□ -1.35
DDX56-211ENST00000479602 ZNF331Q9NQX6 463 aaPredicted RBP6.6□□□□□ -1.35
DDX56-211ENST00000479602 RPRMQ9NS64 109 aa6.6□□□□□ -1.35
DDX56-211ENST00000479602 PRELID1Q9Y255 219 aa6.6□□□□□ -1.35
DDX56-211ENST00000479602 TRBV19A0A075B6N1 114 aa6.59□□□□□ -1.35
DDX56-211ENST00000479602 IGHV3OR16-8A0A075B7F1 116 aa6.59□□□□□ -1.35
DDX56-211ENST00000479602 TRBV7-9A0A0J9YWB2 115 aa6.59□□□□□ -1.35
DDX56-211ENST00000479602 ZNF207O43670 478 aaKnown RBP6.59□□□□□ -1.35
DDX56-211ENST00000479602 NDUFS6O75380 124 aaKnown RBP6.59□□□□□ -1.35
DDX56-211ENST00000479602 CD300CQ08708 224 aa6.59□□□□□ -1.35
DDX56-211ENST00000479602 GCSAMLQ5JQS6 135 aa6.59□□□□□ -1.35
DDX56-211ENST00000479602 MORN5Q5VZ52 161 aa6.59□□□□□ -1.35
DDX56-211ENST00000479602 FOXI2Q6ZQN5 318 aa6.59□□□□□ -1.35
DDX56-211ENST00000479602 OR10G4Q8NGN3 311 aa6.59□□□□□ -1.35
DDX56-211ENST00000479602 OR10G9Q8NGN4 311 aa6.59□□□□□ -1.35
DDX56-211ENST00000479602 OR10G7Q8NGN6 311 aa6.59□□□□□ -1.35
DDX56-211ENST00000479602 MBD3L1Q8WWY6 194 aa6.59□□□□□ -1.35
DDX56-211ENST00000479602 RAB24Q969Q5 203 aa6.59□□□□□ -1.35
DDX56-211ENST00000479602 FXYD5Q96DB9 178 aa6.59□□□□□ -1.35
DDX56-211ENST00000479602 NKX6-2Q9C056 277 aaPredicted RBP6.59□□□□□ -1.35
DDX56-211ENST00000479602 ACTR3CQ9C0K3 210 aaPredicted RBP6.59□□□□□ -1.35
DDX56-211ENST00000479602 SH3BGRL3Q9H299 93 aa6.59□□□□□ -1.35
DDX56-211ENST00000479602 MAP6D1Q9H9H5 199 aa6.59□□□□□ -1.35
DDX56-211ENST00000479602 TMEM167BQ9NRX6 74 aa6.59□□□□□ -1.35
DDX56-211ENST00000479602 HERC2O95714 4834 aa6.59□□□□□ -1.36
DDX56-211ENST00000479602 A0A1W2PPV4 95 aa6.58□□□□□ -1.36
DDX56-211ENST00000479602 OR11H12B2RN74 326 aa6.58□□□□□ -1.36
DDX56-211ENST00000479602 ATF4P18848 351 aaPredicted RBP6.58□□□□□ -1.36
DDX56-211ENST00000479602 FHITP49789 147 aa6.58□□□□□ -1.36
DDX56-211ENST00000479602 SULT1A2P50226 295 aa6.58□□□□□ -1.36
DDX56-211ENST00000479602 CD81P60033 236 aa6.58□□□□□ -1.36
DDX56-211ENST00000479602 RAB2AP61019 212 aa6.58□□□□□ -1.36
DDX56-211ENST00000479602 PSG9Q00887 426 aa6.58□□□□□ -1.36
DDX56-211ENST00000479602 AKR1C8PQ5T2L2 129 aa6.58□□□□□ -1.36
DDX56-211ENST00000479602 LRRC20Q8TCA0 184 aa6.58□□□□□ -1.36
DDX56-211ENST00000479602 ZNF503Q96F45 646 aa6.58□□□□□ -1.36
DDX56-211ENST00000479602 ODF3Q96PU9 254 aa6.58□□□□□ -1.36
DDX56-211ENST00000479602 OR51M1Q9H341 326 aa6.58□□□□□ -1.36
DDX56-211ENST00000479602 PPP1R14DQ9NXH3 145 aa6.58□□□□□ -1.36
DDX56-211ENST00000479602 DOK5Q9P104 306 aa6.58□□□□□ -1.36
DDX56-211ENST00000479602 VPS13DQ5THJ4 4388 aa6.57□□□□□ -1.36
DDX56-211ENST00000479602 TRAV8-2A0A0B4J237 113 aa6.57□□□□□ -1.36
DDX56-211ENST00000479602 SERTM2A0A1B0GWG4 89 aa6.57□□□□□ -1.36
DDX56-211ENST00000479602 A0A1W2PRE2 83 aa6.57□□□□□ -1.36
DDX56-211ENST00000479602 FBLL1A6NHQ2 334 aaKnown RBP6.57□□□□□ -1.36
DDX56-211ENST00000479602 DNASE2O00115 360 aaPredicted RBP6.57□□□□□ -1.36
DDX56-211ENST00000479602 CXorf1O96002 111 aa6.57□□□□□ -1.36
DDX56-211ENST00000479602 SLC25A5P05141 298 aaKnown RBP6.57□□□□□ -1.36
DDX56-211ENST00000479602 NBEAP1P0C6P0 100 aa6.57□□□□□ -1.36
DDX56-211ENST00000479602 HLA-DRB4P13762 266 aa6.57□□□□□ -1.36
DDX56-211ENST00000479602 PPT1P50897 306 aa6.57□□□□□ -1.36
DDX56-211ENST00000479602 MIR17HGQ75NE6 70 aa6.57□□□□□ -1.36
DDX56-211ENST00000479602 LYPD6BQ8NI32 183 aa6.57□□□□□ -1.36
DDX56-211ENST00000479602 TMED6Q8WW62 240 aa6.57□□□□□ -1.36
DDX56-211ENST00000479602 SPATA25Q9BR10 227 aa6.57□□□□□ -1.36
DDX56-211ENST00000479602 TXNDC17Q9BRA2 123 aa6.57□□□□□ -1.36
DDX56-211ENST00000479602 PAXXQ9BUH6 204 aa6.57□□□□□ -1.36
DDX56-211ENST00000479602 SLC25A22Q9H936 323 aa6.57□□□□□ -1.36
DDX56-211ENST00000479602 ZNF586Q9NXT0 402 aa6.57□□□□□ -1.36
DDX56-211ENST00000479602 HLA-DRB4X5D2U9 266 aa6.57□□□□□ -1.36
DDX56-211ENST00000479602 IGHV3OR16-13A0A075B7E8 117 aa6.56□□□□□ -1.36
DDX56-211ENST00000479602 IGHV3-49A0A0A0MS15 119 aa6.56□□□□□ -1.36
DDX56-211ENST00000479602 IGHV3-74A0A0B4J1X5 117 aa6.56□□□□□ -1.36
DDX56-211ENST00000479602 RBAKDNA6NC62 111 aa6.56□□□□□ -1.36
DDX56-211ENST00000479602 H3BQ15 152 aa6.56□□□□□ -1.36
DDX56-211ENST00000479602 UBE2CO00762 179 aa6.56□□□□□ -1.36
DDX56-211ENST00000479602 NDUFB4O95168 129 aa6.56□□□□□ -1.36
DDX56-211ENST00000479602 NMBP08949 121 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms