RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 FAM78BQ5VT40 261 aa7.54□□□□□ -1.2
HDAC6-222ENST00000478095 MIR17HGQ75NE6 70 aa7.54□□□□□ -1.2
HDAC6-222ENST00000478095 BPIFA4PQ86YQ2 179 aa7.54□□□□□ -1.2
HDAC6-222ENST00000478095 KIR2DL5AQ8N109 375 aa7.54□□□□□ -1.2
HDAC6-222ENST00000478095 INO80EQ8NBZ0 244 aaPredicted RBP7.54□□□□□ -1.2
HDAC6-222ENST00000478095 KIR2DL5BQ8NHK3 375 aa7.54□□□□□ -1.2
HDAC6-222ENST00000478095 LRRC20Q8TCA0 184 aa7.54□□□□□ -1.2
HDAC6-222ENST00000478095 GATAD1Q8WUU5 269 aa7.54□□□□□ -1.2
HDAC6-222ENST00000478095 OVOL2Q9BRP0 275 aa7.54□□□□□ -1.2
HDAC6-222ENST00000478095 TNFSF18Q9UNG2 199 aa7.54□□□□□ -1.2
HDAC6-222ENST00000478095 RNF24Q9Y225 148 aa7.54□□□□□ -1.2
HDAC6-222ENST00000478095 hCG_2014768A0A024R1R8 64 aa7.53□□□□□ -1.2
HDAC6-222ENST00000478095 H3BMM0 161 aa7.53□□□□□ -1.2
HDAC6-222ENST00000478095 H3BQ15 152 aa7.53□□□□□ -1.2
HDAC6-222ENST00000478095 SLC17A3O00476 420 aa7.53□□□□□ -1.2
HDAC6-222ENST00000478095 EIF3GO75821 320 aaKnown RBP eCLIP7.53□□□□□ -1.2
HDAC6-222ENST00000478095 IGLC2P0DOY2 106 aa7.53□□□□□ -1.2
HDAC6-222ENST00000478095 PYYP10082 97 aa7.53□□□□□ -1.2
HDAC6-222ENST00000478095 HLA-DRB4P13762 266 aa7.53□□□□□ -1.2
HDAC6-222ENST00000478095 C4BPBP20851 252 aa7.53□□□□□ -1.2
HDAC6-222ENST00000478095 XP32Q5T750 250 aa7.53□□□□□ -1.2
HDAC6-222ENST00000478095 SAMD13Q5VXD3 122 aa7.53□□□□□ -1.2
HDAC6-222ENST00000478095 HSD17B11Q8NBQ5 300 aa7.53□□□□□ -1.2
HDAC6-222ENST00000478095 PARD6GQ9BYG4 376 aaPredicted RBP7.53□□□□□ -1.2
HDAC6-222ENST00000478095 HLA-DRB4X5D2U9 266 aa7.53□□□□□ -1.2
HDAC6-222ENST00000478095 COL7A1Q02388 2944 aa7.52□□□□□ -1.21
HDAC6-222ENST00000478095 UBE2CO00762 179 aa7.52□□□□□ -1.21
HDAC6-222ENST00000478095 SPRY2O43597 315 aa7.52□□□□□ -1.21
HDAC6-222ENST00000478095 GIG44P09565 113 aaPredicted RBP7.52□□□□□ -1.21
HDAC6-222ENST00000478095 ZNF705DP0CH99 300 aaPredicted RBP7.52□□□□□ -1.21
HDAC6-222ENST00000478095 ZNF705BP0CI00 300 aaPredicted RBP7.52□□□□□ -1.21
HDAC6-222ENST00000478095 FXYD7P58549 80 aa7.52□□□□□ -1.21
HDAC6-222ENST00000478095 ZNF266Q14584 549 aa7.52□□□□□ -1.21
HDAC6-222ENST00000478095 Q6ZNX1 250 aa7.52□□□□□ -1.21
HDAC6-222ENST00000478095 FOXI2Q6ZQN5 318 aa7.52□□□□□ -1.21
HDAC6-222ENST00000478095 Q6ZWC4 215 aa7.52□□□□□ -1.21
HDAC6-222ENST00000478095 ZNF738Q8NE65 137 aa7.52□□□□□ -1.21
HDAC6-222ENST00000478095 OR4B1Q8NGF8 309 aa7.52□□□□□ -1.21
HDAC6-222ENST00000478095 WWC2-AS2Q96NR7 200 aa7.52□□□□□ -1.21
HDAC6-222ENST00000478095 SLC25A2Q9BXI2 301 aa7.52□□□□□ -1.21
HDAC6-222ENST00000478095 SAV1Q9H4B6 383 aaPredicted RBP7.52□□□□□ -1.21
HDAC6-222ENST00000478095 RPRMQ9NS64 109 aa7.52□□□□□ -1.21
HDAC6-222ENST00000478095 ZNF586Q9NXT0 402 aa7.52□□□□□ -1.21
HDAC6-222ENST00000478095 CLEC5AQ9NY25 188 aa7.52□□□□□ -1.21
HDAC6-222ENST00000478095 FUT9Q9Y231 359 aa7.52□□□□□ -1.21
HDAC6-222ENST00000478095 A0A0J9YX75 114 aa7.51□□□□□ -1.21
HDAC6-222ENST00000478095 SPP1P10451 314 aa7.51□□□□□ -1.21
HDAC6-222ENST00000478095 CXCL2P19875 107 aa7.51□□□□□ -1.21
HDAC6-222ENST00000478095 ATP6V0CP27449 155 aa7.51□□□□□ -1.21
HDAC6-222ENST00000478095 RAB2AP61019 212 aa7.51□□□□□ -1.21
HDAC6-222ENST00000478095 RPL7L1Q6DKI1 246 aaKnown RBP7.51□□□□□ -1.21
HDAC6-222ENST00000478095 EBLN2Q6P2I7 272 aa7.51□□□□□ -1.21
HDAC6-222ENST00000478095 LCN15Q6UWW0 184 aa7.51□□□□□ -1.21
HDAC6-222ENST00000478095 OR11H4Q8NGC9 324 aa7.51□□□□□ -1.21
HDAC6-222ENST00000478095 BLNKQ8WV28 456 aa7.51□□□□□ -1.21
HDAC6-222ENST00000478095 RNF183Q96D59 192 aa7.51□□□□□ -1.21
HDAC6-222ENST00000478095 FAM167A-AS1Q96KT0 104 aa7.51□□□□□ -1.21
HDAC6-222ENST00000478095 MRPL32Q9BYC8 188 aaKnown RBP7.51□□□□□ -1.21
HDAC6-222ENST00000478095 MFFQ9GZY8 342 aa7.51□□□□□ -1.21
HDAC6-222ENST00000478095 SH3BGRL3Q9H299 93 aa7.51□□□□□ -1.21
HDAC6-222ENST00000478095 HRH4Q9H3N8 390 aa7.51□□□□□ -1.21
HDAC6-222ENST00000478095 ZNF331Q9NQX6 463 aaPredicted RBP7.51□□□□□ -1.21
HDAC6-222ENST00000478095 ZNF705FA8MVS1 300 aaPredicted RBP7.5□□□□□ -1.21
HDAC6-222ENST00000478095 OR7C2O60412 319 aa7.5□□□□□ -1.21
HDAC6-222ENST00000478095 OR10J4P0C629 311 aa7.5□□□□□ -1.21
HDAC6-222ENST00000478095 PSG3Q16557 428 aa7.5□□□□□ -1.21
HDAC6-222ENST00000478095 MORN3Q6PF18 240 aaPredicted RBP7.5□□□□□ -1.21
HDAC6-222ENST00000478095 SAT2Q96F10 170 aaPredicted RBP7.5□□□□□ -1.21
HDAC6-222ENST00000478095 SLC50A1Q9BRV3 221 aa7.5□□□□□ -1.21
HDAC6-222ENST00000478095 SLC35B3Q9H1N7 401 aa7.5□□□□□ -1.21
HDAC6-222ENST00000478095 EDA2RQ9HAV5 297 aa7.5□□□□□ -1.21
HDAC6-222ENST00000478095 TMEM14CQ9P0S9 112 aa7.5□□□□□ -1.21
HDAC6-222ENST00000478095 XCL2Q9UBD3 114 aa7.5□□□□□ -1.21
HDAC6-222ENST00000478095 TP53TG1Q9Y2A0 90 aa7.5□□□□□ -1.21
HDAC6-222ENST00000478095 TIMM9Q9Y5J7 89 aa7.5□□□□□ -1.21
HDAC6-222ENST00000478095 TRBV19A0A075B6N1 114 aa7.49□□□□□ -1.21
HDAC6-222ENST00000478095 BORCS7-ASMTA0A0B4J1R7 106 aa7.49□□□□□ -1.21
HDAC6-222ENST00000478095 TMEM238LA0A1B0GVL6 79 aa7.49□□□□□ -1.21
HDAC6-222ENST00000478095 HIST1H1EP10412 219 aaKnown RBP7.49□□□□□ -1.21
HDAC6-222ENST00000478095 M6PRP20645 277 aa7.49□□□□□ -1.21
HDAC6-222ENST00000478095 CNN1P51911 297 aaKnown RBP7.49□□□□□ -1.21
HDAC6-222ENST00000478095 NUTF2P61970 127 aaKnown RBP7.49□□□□□ -1.21
HDAC6-222ENST00000478095 RHOBP62745 196 aa7.49□□□□□ -1.21
HDAC6-222ENST00000478095 HIST1H1AQ02539 215 aaPredicted RBP7.49□□□□□ -1.21
HDAC6-222ENST00000478095 GUK1Q16774 197 aa7.49□□□□□ -1.21
HDAC6-222ENST00000478095 ACOT6Q3I5F7 207 aaPredicted RBP7.49□□□□□ -1.21
HDAC6-222ENST00000478095 FAM122CQ6P4D5 195 aa7.49□□□□□ -1.21
HDAC6-222ENST00000478095 RPUSD4Q96CM3 377 aaKnown RBP7.49□□□□□ -1.21
HDAC6-222ENST00000478095 PAXXQ9BUH6 204 aa7.49□□□□□ -1.21
HDAC6-222ENST00000478095 OR51M1Q9H341 326 aa7.49□□□□□ -1.21
HDAC6-222ENST00000478095 TENM3Q9P273 2699 aa7.49□□□□□ -1.21
HDAC6-222ENST00000478095 STAB2Q8WWQ8 2551 aa7.48□□□□□ -1.21
HDAC6-222ENST00000478095 A0A0J9YWU9 116 aa7.48□□□□□ -1.21
HDAC6-222ENST00000478095 A0A1W2PPV4 95 aa7.48□□□□□ -1.21
HDAC6-222ENST00000478095 PRAC2D3DTV9 90 aa7.48□□□□□ -1.21
HDAC6-222ENST00000478095 HMGB3O15347 200 aaKnown RBP7.48□□□□□ -1.21
HDAC6-222ENST00000478095 NDUFB4O95168 129 aa7.48□□□□□ -1.21
HDAC6-222ENST00000478095 UBE2L3P68036 154 aaKnown RBP7.48□□□□□ -1.21
HDAC6-222ENST00000478095 PSG9Q00887 426 aa7.48□□□□□ -1.21
HDAC6-222ENST00000478095 KHDC3LQ587J8 217 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms