RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 ATP6V0BQ99437 205 aa7.06□□□□□ -1.28
SMARCB1-206ENST00000477836 CSTL1Q9H114 145 aa7.06□□□□□ -1.28
SMARCB1-206ENST00000477836 SLC45A2Q9UMX9 530 aa7.06□□□□□ -1.28
SMARCB1-206ENST00000477836 RFNGQ9Y644 331 aa7.06□□□□□ -1.28
SMARCB1-206ENST00000477836 TRAV25A0A0B4J276 109 aa7.05□□□□□ -1.28
SMARCB1-206ENST00000477836 TGOLN2O43493 480 aa7.05□□□□□ -1.28
SMARCB1-206ENST00000477836 COX7A2P2O60397 106 aa7.05□□□□□ -1.28
SMARCB1-206ENST00000477836 IGKV1-17P01599 117 aa7.05□□□□□ -1.28
SMARCB1-206ENST00000477836 M6PRP20645 277 aa7.05□□□□□ -1.28
SMARCB1-206ENST00000477836 HLA-DMBP28068 263 aa7.05□□□□□ -1.28
SMARCB1-206ENST00000477836 ZNF90Q03938 601 aa7.05□□□□□ -1.28
SMARCB1-206ENST00000477836 ACOT6Q3I5F7 207 aaPredicted RBP7.05□□□□□ -1.28
SMARCB1-206ENST00000477836 ODF3L2Q3SX64 289 aa7.05□□□□□ -1.28
SMARCB1-206ENST00000477836 CLEC19AQ6UXS0 136 aa7.05□□□□□ -1.28
SMARCB1-206ENST00000477836 DPPA3Q6W0C5 159 aa7.05□□□□□ -1.28
SMARCB1-206ENST00000477836 Q6ZRG5 221 aa7.05□□□□□ -1.28
SMARCB1-206ENST00000477836 HRH4Q9H3N8 390 aa7.05□□□□□ -1.28
SMARCB1-206ENST00000477836 YIF1AO95070 293 aa7.04□□□□□ -1.28
SMARCB1-206ENST00000477836 TOMM40O96008 361 aa7.04□□□□□ -1.28
SMARCB1-206ENST00000477836 NMBP08949 121 aa7.04□□□□□ -1.28
SMARCB1-206ENST00000477836 RD3LP0DJH9 198 aa7.04□□□□□ -1.28
SMARCB1-206ENST00000477836 GATA2P23769 480 aaPredicted RBP7.04□□□□□ -1.28
SMARCB1-206ENST00000477836 ARL3P36405 182 aa7.04□□□□□ -1.28
SMARCB1-206ENST00000477836 YPEL3P61236 119 aaPredicted RBP7.04□□□□□ -1.28
SMARCB1-206ENST00000477836 LYZP61626 148 aa7.04□□□□□ -1.28
SMARCB1-206ENST00000477836 RELQ04864 619 aaPredicted RBP7.04□□□□□ -1.28
SMARCB1-206ENST00000477836 CLLU1Q5K131 121 aa7.04□□□□□ -1.28
SMARCB1-206ENST00000477836 PXDC1Q5TGL8 231 aa7.04□□□□□ -1.28
SMARCB1-206ENST00000477836 SPSB3Q6PJ21 355 aa7.04□□□□□ -1.28
SMARCB1-206ENST00000477836 GPHB5Q86YW7 130 aa7.04□□□□□ -1.28
SMARCB1-206ENST00000477836 UBE2DNLQ8IWF7 75 aa7.04□□□□□ -1.28
SMARCB1-206ENST00000477836 OR10G4Q8NGN3 311 aa7.04□□□□□ -1.28
SMARCB1-206ENST00000477836 OR10G9Q8NGN4 311 aa7.04□□□□□ -1.28
SMARCB1-206ENST00000477836 OR10G7Q8NGN6 311 aa7.04□□□□□ -1.28
SMARCB1-206ENST00000477836 OR1L4Q8NGR5 311 aa7.04□□□□□ -1.28
SMARCB1-206ENST00000477836 SAT2Q96F10 170 aaPredicted RBP7.04□□□□□ -1.28
SMARCB1-206ENST00000477836 C18orf15Q96N68 181 aa7.04□□□□□ -1.28
SMARCB1-206ENST00000477836 PFDN5Q99471 154 aa7.04□□□□□ -1.28
SMARCB1-206ENST00000477836 SPAG8Q99932 426 aaPredicted RBP7.04□□□□□ -1.28
SMARCB1-206ENST00000477836 SLC25A22Q9H936 323 aa7.04□□□□□ -1.28
SMARCB1-206ENST00000477836 RPRMQ9NS64 109 aa7.04□□□□□ -1.28
SMARCB1-206ENST00000477836 DOK5Q9P104 306 aa7.04□□□□□ -1.28
SMARCB1-206ENST00000477836 A8MWP6 167 aa7.03□□□□□ -1.28
SMARCB1-206ENST00000477836 AMBPP02760 352 aa7.03□□□□□ -1.28
SMARCB1-206ENST00000477836 CLEC3BP05452 202 aa7.03□□□□□ -1.28
SMARCB1-206ENST00000477836 PSG1P11464 419 aa7.03□□□□□ -1.28
SMARCB1-206ENST00000477836 CDC34P49427 236 aaPredicted RBP7.03□□□□□ -1.28
SMARCB1-206ENST00000477836 FHITP49789 147 aa7.03□□□□□ -1.28
SMARCB1-206ENST00000477836 RHOBP62745 196 aa7.03□□□□□ -1.28
SMARCB1-206ENST00000477836 BLOC1S1P78537 153 aa7.03□□□□□ -1.28
SMARCB1-206ENST00000477836 FAM106AQ4KMX7 169 aa7.03□□□□□ -1.28
SMARCB1-206ENST00000477836 GCSAMLQ5JQS6 135 aa7.03□□□□□ -1.28
SMARCB1-206ENST00000477836 FAM122CQ6P4D5 195 aa7.03□□□□□ -1.28
SMARCB1-206ENST00000477836 ZNF600Q6ZNG1 722 aa7.03□□□□□ -1.28
SMARCB1-206ENST00000477836 APRG1Q8IVJ8 170 aa7.03□□□□□ -1.28
SMARCB1-206ENST00000477836 OR51G1Q8NGK1 321 aa7.03□□□□□ -1.28
SMARCB1-206ENST00000477836 Q8WTZ3 238 aa7.03□□□□□ -1.28
SMARCB1-206ENST00000477836 PCNPQ8WW12 178 aaKnown RBP7.03□□□□□ -1.28
SMARCB1-206ENST00000477836 RNF2Q99496 336 aa7.03□□□□□ -1.28
SMARCB1-206ENST00000477836 NDUFAF3Q9BU61 184 aa7.03□□□□□ -1.28
SMARCB1-206ENST00000477836 PBDC1Q9BVG4 233 aa7.03□□□□□ -1.28
SMARCB1-206ENST00000477836 ACTR3CQ9C0K3 210 aaPredicted RBP7.03□□□□□ -1.28
SMARCB1-206ENST00000477836 VSIRQ9H7M9 311 aa7.03□□□□□ -1.28
SMARCB1-206ENST00000477836 ELOA3CA0A087WX78 387 aaPredicted RBP7.02□□□□□ -1.29
SMARCB1-206ENST00000477836 CTXND1A0A1B0GTU2 59 aa7.02□□□□□ -1.29
SMARCB1-206ENST00000477836 A0A1W2PPV4 95 aa7.02□□□□□ -1.29
SMARCB1-206ENST00000477836 MAP1LC3B2A6NCE7 125 aa7.02□□□□□ -1.29
SMARCB1-206ENST00000477836 TEX46H3BTG2 121 aa7.02□□□□□ -1.29
SMARCB1-206ENST00000477836 HYPMO75409 117 aa7.02□□□□□ -1.29
SMARCB1-206ENST00000477836 HBE1P02100 147 aa7.02□□□□□ -1.29
SMARCB1-206ENST00000477836 IL4P05112 153 aa7.02□□□□□ -1.29
SMARCB1-206ENST00000477836 CTSGP08311 255 aa7.02□□□□□ -1.29
SMARCB1-206ENST00000477836 OR5G3P0C626 314 aa7.02□□□□□ -1.29
SMARCB1-206ENST00000477836 ORM2P19652 201 aa7.02□□□□□ -1.29
SMARCB1-206ENST00000477836 ADMP35318 185 aa7.02□□□□□ -1.29
SMARCB1-206ENST00000477836 ZNF124Q15973 351 aa7.02□□□□□ -1.29
SMARCB1-206ENST00000477836 OR1B1Q8NGR6 318 aa7.02□□□□□ -1.29
SMARCB1-206ENST00000477836 RNF125Q96EQ8 232 aa7.02□□□□□ -1.29
SMARCB1-206ENST00000477836 CHRDL1Q9BU40 450 aa7.02□□□□□ -1.29
SMARCB1-206ENST00000477836 MRPL32Q9BYC8 188 aaKnown RBP7.02□□□□□ -1.29
SMARCB1-206ENST00000477836 MAP1LC3BQ9GZQ8 125 aa7.02□□□□□ -1.29
SMARCB1-206ENST00000477836 PUS1Q9Y606 427 aaKnown RBP eCLIP7.02□□□□□ -1.29
SMARCB1-206ENST00000477836 DEFB131BA0A096LNP1 70 aa7.01□□□□□ -1.29
SMARCB1-206ENST00000477836 H2AFB1P0C5Y9 115 aa7.01□□□□□ -1.29
SMARCB1-206ENST00000477836 RBMY1CP0DJD4 496 aa7.01□□□□□ -1.29
SMARCB1-206ENST00000477836 TAS2R45P59539 299 aa7.01□□□□□ -1.29
SMARCB1-206ENST00000477836 PLP1P60201 277 aa7.01□□□□□ -1.29
SMARCB1-206ENST00000477836 ZNF726P1Q15940 193 aa7.01□□□□□ -1.29
SMARCB1-206ENST00000477836 FAM78BQ5VT40 261 aa7.01□□□□□ -1.29
SMARCB1-206ENST00000477836 C10orf113Q5VZT2 155 aa7.01□□□□□ -1.29
SMARCB1-206ENST00000477836 LCN15Q6UWW0 184 aa7.01□□□□□ -1.29
SMARCB1-206ENST00000477836 S100A7AQ86SG5 101 aa7.01□□□□□ -1.29
SMARCB1-206ENST00000477836 Q8NAQ8 132 aa7.01□□□□□ -1.29
SMARCB1-206ENST00000477836 RAB24Q969Q5 203 aa7.01□□□□□ -1.29
SMARCB1-206ENST00000477836 PFDN2Q9UHV9 154 aa7.01□□□□□ -1.29
SMARCB1-206ENST00000477836 FUT9Q9Y231 359 aa7.01□□□□□ -1.29
SMARCB1-206ENST00000477836 HIGD1AQ9Y241 93 aa7.01□□□□□ -1.29
SMARCB1-206ENST00000477836 IGHV3-35A0A0C4DH35 117 aa7□□□□□ -1.29
SMARCB1-206ENST00000477836 A0A1B0GV50 99 aa7□□□□□ -1.29
SMARCB1-206ENST00000477836 TSPAN4O14817 238 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms