RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 MRPS12O15235 138 aaKnown RBP9.79□□□□□ -0.84
HLA-DPA1-246ENST00000476642 ZNF253O75346 499 aa9.79□□□□□ -0.84
HLA-DPA1-246ENST00000476642 KHDC3LQ587J8 217 aa9.79□□□□□ -0.84
HLA-DPA1-246ENST00000476642 LINC00322Q6ZN03 302 aaPredicted RBP9.79□□□□□ -0.84
HLA-DPA1-246ENST00000476642 APRG1Q8IVJ8 170 aa9.79□□□□□ -0.84
HLA-DPA1-246ENST00000476642 KIR2DL5AQ8N109 375 aa9.79□□□□□ -0.84
HLA-DPA1-246ENST00000476642 FAM24BQ8N5W8 94 aa9.79□□□□□ -0.84
HLA-DPA1-246ENST00000476642 OR10G4Q8NGN3 311 aa9.79□□□□□ -0.84
HLA-DPA1-246ENST00000476642 OR10G9Q8NGN4 311 aa9.79□□□□□ -0.84
HLA-DPA1-246ENST00000476642 OR10G7Q8NGN6 311 aa9.79□□□□□ -0.84
HLA-DPA1-246ENST00000476642 KIR2DL5BQ8NHK3 375 aa9.79□□□□□ -0.84
HLA-DPA1-246ENST00000476642 LINC00052Q96N35 136 aa9.79□□□□□ -0.84
HLA-DPA1-246ENST00000476642 ZMAT4Q9H898 229 aa9.79□□□□□ -0.84
HLA-DPA1-246ENST00000476642 BCL2L11O43521 198 aa9.78□□□□□ -0.84
HLA-DPA1-246ENST00000476642 IGLC2P0DOY2 106 aa9.78□□□□□ -0.84
HLA-DPA1-246ENST00000476642 HIST1H1EP10412 219 aaKnown RBP9.78□□□□□ -0.84
HLA-DPA1-246ENST00000476642 NUTF2P61970 127 aaKnown RBP9.78□□□□□ -0.84
HLA-DPA1-246ENST00000476642 PDE6HQ13956 83 aa9.78□□□□□ -0.84
HLA-DPA1-246ENST00000476642 TMEM41BQ5BJD5 291 aa9.78□□□□□ -0.84
HLA-DPA1-246ENST00000476642 GCSAMLQ5JQS6 135 aa9.78□□□□□ -0.84
HLA-DPA1-246ENST00000476642 MORN5Q5VZ52 161 aa9.78□□□□□ -0.84
HLA-DPA1-246ENST00000476642 EBLN2Q6P2I7 272 aa9.78□□□□□ -0.84
HLA-DPA1-246ENST00000476642 OR51M1Q9H341 326 aa9.78□□□□□ -0.84
HLA-DPA1-246ENST00000476642 TRAV5A0A0B4J249 113 aa9.77□□□□□ -0.85
HLA-DPA1-246ENST00000476642 RBMY1BA6NDE4 496 aaKnown RBP9.77□□□□□ -0.85
HLA-DPA1-246ENST00000476642 RBMY1EA6NEQ0 496 aaKnown RBP9.77□□□□□ -0.85
HLA-DPA1-246ENST00000476642 OR7C2O60412 319 aa9.77□□□□□ -0.85
HLA-DPA1-246ENST00000476642 RBMY1DP0C7P1 496 aaKnown RBP9.77□□□□□ -0.85
HLA-DPA1-246ENST00000476642 PSG9Q00887 426 aa9.77□□□□□ -0.85
HLA-DPA1-246ENST00000476642 AKR1C8PQ5T2L2 129 aa9.77□□□□□ -0.85
HLA-DPA1-246ENST00000476642 MORN3Q6PF18 240 aaPredicted RBP9.77□□□□□ -0.85
HLA-DPA1-246ENST00000476642 PQLC2Q6ZP29 291 aa9.77□□□□□ -0.85
HLA-DPA1-246ENST00000476642 FOXI2Q6ZQN5 318 aa9.77□□□□□ -0.85
HLA-DPA1-246ENST00000476642 TMUB2Q71RG4 321 aa9.77□□□□□ -0.85
HLA-DPA1-246ENST00000476642 MIR17HGQ75NE6 70 aa9.77□□□□□ -0.85
HLA-DPA1-246ENST00000476642 SPATA25Q9BR10 227 aa9.77□□□□□ -0.85
HLA-DPA1-246ENST00000476642 PAXXQ9BUH6 204 aa9.77□□□□□ -0.85
HLA-DPA1-246ENST00000476642 ZNF471Q9BX82 626 aaPredicted RBP9.77□□□□□ -0.85
HLA-DPA1-246ENST00000476642 U3KQK5 164 aa9.77□□□□□ -0.85
HLA-DPA1-246ENST00000476642 SPP1P10451 314 aa9.76□□□□□ -0.85
HLA-DPA1-246ENST00000476642 TPT1P13693 172 aaKnown RBP9.76□□□□□ -0.85
HLA-DPA1-246ENST00000476642 CDC34P49427 236 aaPredicted RBP9.76□□□□□ -0.85
HLA-DPA1-246ENST00000476642 HAGHQ16775 308 aa9.76□□□□□ -0.85
HLA-DPA1-246ENST00000476642 ACTL10Q5JWF8 245 aa9.76□□□□□ -0.85
HLA-DPA1-246ENST00000476642 EIF5AL1Q6IS14 154 aaKnown RBP9.76□□□□□ -0.85
HLA-DPA1-246ENST00000476642 SBSPONQ8IVN8 264 aa9.76□□□□□ -0.85
HLA-DPA1-246ENST00000476642 CITED4Q96RK1 184 aa9.76□□□□□ -0.85
HLA-DPA1-246ENST00000476642 SLC25A2Q9BXI2 301 aa9.76□□□□□ -0.85
HLA-DPA1-246ENST00000476642 ACTR3CQ9C0K3 210 aaPredicted RBP9.76□□□□□ -0.85
HLA-DPA1-246ENST00000476642 CSTL1Q9H114 145 aa9.76□□□□□ -0.85
HLA-DPA1-246ENST00000476642 SAV1Q9H4B6 383 aaPredicted RBP9.76□□□□□ -0.85
HLA-DPA1-246ENST00000476642 AAMDCQ9H7C9 122 aa9.76□□□□□ -0.85
HLA-DPA1-246ENST00000476642 ZNF331Q9NQX6 463 aaPredicted RBP9.76□□□□□ -0.85
HLA-DPA1-246ENST00000476642 CYTL1Q9NRR1 136 aa9.76□□□□□ -0.85
HLA-DPA1-246ENST00000476642 PRELID1Q9Y255 219 aa9.76□□□□□ -0.85
HLA-DPA1-246ENST00000476642 TRBV19A0A075B6N1 114 aa9.75□□□□□ -0.85
HLA-DPA1-246ENST00000476642 LINC00862A6NCI5 91 aa9.75□□□□□ -0.85
HLA-DPA1-246ENST00000476642 DUSP14O95147 198 aaKnown RBP9.75□□□□□ -0.85
HLA-DPA1-246ENST00000476642 NBEAP1P0C6P0 100 aa9.75□□□□□ -0.85
HLA-DPA1-246ENST00000476642 SEC11BP0C7V7 166 aa9.75□□□□□ -0.85
HLA-DPA1-246ENST00000476642 HLA-DRB4P13762 266 aa9.75□□□□□ -0.85
HLA-DPA1-246ENST00000476642 RAB2AP61019 212 aa9.75□□□□□ -0.85
HLA-DPA1-246ENST00000476642 PSG3Q16557 428 aa9.75□□□□□ -0.85
HLA-DPA1-246ENST00000476642 FAM122CQ6P4D5 195 aa9.75□□□□□ -0.85
HLA-DPA1-246ENST00000476642 Q6ZWC4 215 aa9.75□□□□□ -0.85
HLA-DPA1-246ENST00000476642 ZNF738Q8NE65 137 aa9.75□□□□□ -0.85
HLA-DPA1-246ENST00000476642 RNF141Q8WVD5 230 aa9.75□□□□□ -0.85
HLA-DPA1-246ENST00000476642 FAM167A-AS1Q96KT0 104 aa9.75□□□□□ -0.85
HLA-DPA1-246ENST00000476642 CLUHP3Q96NS8 147 aa9.75□□□□□ -0.85
HLA-DPA1-246ENST00000476642 ASCL2Q99929 193 aa9.75□□□□□ -0.85
HLA-DPA1-246ENST00000476642 TM2D3Q9BRN9 247 aa9.75□□□□□ -0.85
HLA-DPA1-246ENST00000476642 C1QTNF4Q9BXJ3 329 aa9.75□□□□□ -0.85
HLA-DPA1-246ENST00000476642 SH3BGRL3Q9H299 93 aa9.75□□□□□ -0.85
HLA-DPA1-246ENST00000476642 ZNF586Q9NXT0 402 aa9.75□□□□□ -0.85
HLA-DPA1-246ENST00000476642 TMA7Q9Y2S6 64 aaKnown RBP9.75□□□□□ -0.85
HLA-DPA1-246ENST00000476642 HLA-DRB4X5D2U9 266 aa9.75□□□□□ -0.85
HLA-DPA1-246ENST00000476642 UMAD1C9J7I0 102 aa9.74□□□□□ -0.85
HLA-DPA1-246ENST00000476642 H3BQ15 152 aa9.74□□□□□ -0.85
HLA-DPA1-246ENST00000476642 PYYP10082 97 aa9.74□□□□□ -0.85
HLA-DPA1-246ENST00000476642 RPL35AP18077 110 aaKnown RBP9.74□□□□□ -0.85
HLA-DPA1-246ENST00000476642 UBE2L3P68036 154 aaKnown RBP9.74□□□□□ -0.85
HLA-DPA1-246ENST00000476642 ZNF124Q15973 351 aa9.74□□□□□ -0.85
HLA-DPA1-246ENST00000476642 TRPT1Q86TN4 253 aaKnown RBP9.74□□□□□ -0.85
HLA-DPA1-246ENST00000476642 BAP18Q8IXM2 172 aa9.74□□□□□ -0.85
HLA-DPA1-246ENST00000476642 LYPD1Q8N2G4 141 aa9.74□□□□□ -0.85
HLA-DPA1-246ENST00000476642 MRPL53Q96EL3 112 aaKnown RBP9.74□□□□□ -0.85
HLA-DPA1-246ENST00000476642 SAT2Q96F10 170 aaPredicted RBP9.74□□□□□ -0.85
HLA-DPA1-246ENST00000476642 C17orf77Q96MU5 243 aa9.74□□□□□ -0.85
HLA-DPA1-246ENST00000476642 TRAV8-2A0A0B4J237 113 aa9.73□□□□□ -0.85
HLA-DPA1-246ENST00000476642 LOC105371267A0A1B0GV96 52 aa9.73□□□□□ -0.85
HLA-DPA1-246ENST00000476642 KNCNA6PVL3 124 aa9.73□□□□□ -0.85
HLA-DPA1-246ENST00000476642 H3BMM0 161 aa9.73□□□□□ -0.85
HLA-DPA1-246ENST00000476642 IFNA7P01567 189 aa9.73□□□□□ -0.85
HLA-DPA1-246ENST00000476642 LGALSLQ3ZCW2 172 aaPredicted RBP9.73□□□□□ -0.85
HLA-DPA1-246ENST00000476642 FAM74A1Q5RGS3 127 aa9.73□□□□□ -0.85
HLA-DPA1-246ENST00000476642 RPP25LQ8N5L8 163 aaKnown RBP9.73□□□□□ -0.85
HLA-DPA1-246ENST00000476642 STOML3Q8TAV4 291 aa9.73□□□□□ -0.85
HLA-DPA1-246ENST00000476642 BLNKQ8WV28 456 aa9.73□□□□□ -0.85
HLA-DPA1-246ENST00000476642 RAB24Q969Q5 203 aa9.73□□□□□ -0.85
HLA-DPA1-246ENST00000476642 TP53TG1Q9Y2A0 90 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms