RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 IL4P05112 153 aa4.82□□□□□ -1.64
CLDN4-205ENST00000476494 LGALS1P09382 135 aaKnown RBP4.82□□□□□ -1.64
CLDN4-205ENST00000476494 ORM2P19652 201 aa4.82□□□□□ -1.64
CLDN4-205ENST00000476494 GATA2P23769 480 aaPredicted RBP4.82□□□□□ -1.64
CLDN4-205ENST00000476494 ADMP35318 185 aa4.82□□□□□ -1.64
CLDN4-205ENST00000476494 ARL3P36405 182 aa4.82□□□□□ -1.64
CLDN4-205ENST00000476494 PEA15Q15121 130 aa4.82□□□□□ -1.64
CLDN4-205ENST00000476494 ZNF726P1Q15940 193 aa4.82□□□□□ -1.64
CLDN4-205ENST00000476494 FAM106AQ4KMX7 169 aa4.82□□□□□ -1.64
CLDN4-205ENST00000476494 LCN15Q6UWW0 184 aa4.82□□□□□ -1.64
CLDN4-205ENST00000476494 LINC00305Q7Z4B0 112 aa4.82□□□□□ -1.64
CLDN4-205ENST00000476494 GPHB5Q86YW7 130 aa4.82□□□□□ -1.64
CLDN4-205ENST00000476494 OR1B1Q8NGR6 318 aa4.82□□□□□ -1.64
CLDN4-205ENST00000476494 OR1N2Q8NGR9 330 aa4.82□□□□□ -1.64
CLDN4-205ENST00000476494 TMEM37Q8WXS4 190 aa4.82□□□□□ -1.64
CLDN4-205ENST00000476494 NARS2Q96I59 477 aaKnown RBP4.82□□□□□ -1.64
CLDN4-205ENST00000476494 CCDC140Q96MF4 163 aa4.82□□□□□ -1.64
CLDN4-205ENST00000476494 GPR82Q96P67 336 aa4.82□□□□□ -1.64
CLDN4-205ENST00000476494 TXNDC17Q9BRA2 123 aa4.82□□□□□ -1.64
CLDN4-205ENST00000476494 KRTAP9-2Q9BYQ4 174 aa4.82□□□□□ -1.64
CLDN4-205ENST00000476494 NKX6-2Q9C056 277 aaPredicted RBP4.82□□□□□ -1.64
CLDN4-205ENST00000476494 SEPSECSQ9HD40 501 aaKnown RBP4.82□□□□□ -1.64
CLDN4-205ENST00000476494 MANBALQ9NQG1 85 aa4.82□□□□□ -1.64
CLDN4-205ENST00000476494 RABAC1Q9UI14 185 aa4.82□□□□□ -1.64
CLDN4-205ENST00000476494 ARL2-SNX15V9GYD0 113 aa4.82□□□□□ -1.64
CLDN4-205ENST00000476494 RBFOX3A6NFN3 312 aa4.81□□□□□ -1.64
CLDN4-205ENST00000476494 K7EMT4 169 aa4.81□□□□□ -1.64
CLDN4-205ENST00000476494 IGHV3-23P01764 117 aa4.81□□□□□ -1.64
CLDN4-205ENST00000476494 HSPB1P04792 205 aaKnown RBP4.81□□□□□ -1.64
CLDN4-205ENST00000476494 ATF4P18848 351 aaPredicted RBP4.81□□□□□ -1.64
CLDN4-205ENST00000476494 ZP3P21754 424 aa4.81□□□□□ -1.64
CLDN4-205ENST00000476494 NPPCP23582 126 aa4.81□□□□□ -1.64
CLDN4-205ENST00000476494 BMI1P35226 326 aa4.81□□□□□ -1.64
CLDN4-205ENST00000476494 LYZP61626 148 aa4.81□□□□□ -1.64
CLDN4-205ENST00000476494 GCSAMLQ5JQS6 135 aa4.81□□□□□ -1.64
CLDN4-205ENST00000476494 C1orf194Q5T5A4 169 aa4.81□□□□□ -1.64
CLDN4-205ENST00000476494 TOMM20LQ6UXN7 152 aa4.81□□□□□ -1.64
CLDN4-205ENST00000476494 PATE2Q6UY27 113 aa4.81□□□□□ -1.64
CLDN4-205ENST00000476494 COMMD7Q86VX2 200 aa4.81□□□□□ -1.64
CLDN4-205ENST00000476494 PCNPQ8WW12 178 aaKnown RBP4.81□□□□□ -1.64
CLDN4-205ENST00000476494 C18orf15Q96N68 181 aa4.81□□□□□ -1.64
CLDN4-205ENST00000476494 FAM210AQ96ND0 272 aa4.81□□□□□ -1.64
CLDN4-205ENST00000476494 METTL26Q96S19 204 aa4.81□□□□□ -1.64
CLDN4-205ENST00000476494 OVOL2Q9BRP0 275 aa4.81□□□□□ -1.64
CLDN4-205ENST00000476494 SHANK2-AS3Q9BTD1 123 aa4.81□□□□□ -1.64
CLDN4-205ENST00000476494 CHRDL1Q9BU40 450 aa4.81□□□□□ -1.64
CLDN4-205ENST00000476494 SLC25A39Q9BZJ4 359 aaPredicted RBP4.81□□□□□ -1.64
CLDN4-205ENST00000476494 SLC25A22Q9H936 323 aa4.81□□□□□ -1.64
CLDN4-205ENST00000476494 GNB4Q9HAV0 340 aa4.81□□□□□ -1.64
CLDN4-205ENST00000476494 SIGLEC8Q9NYZ4 499 aa4.81□□□□□ -1.64
CLDN4-205ENST00000476494 TMEM14CQ9P0S9 112 aa4.81□□□□□ -1.64
CLDN4-205ENST00000476494 PUS1Q9Y606 427 aaKnown RBP eCLIP4.81□□□□□ -1.64
CLDN4-205ENST00000476494 S4R3C0 116 aa4.81□□□□□ -1.64
CLDN4-205ENST00000476494 A0A1W2PS18 150 aa4.8□□□□□ -1.64
CLDN4-205ENST00000476494 H3BRN7 92 aa4.8□□□□□ -1.64
CLDN4-205ENST00000476494 LGALS9O00182 355 aa4.8□□□□□ -1.64
CLDN4-205ENST00000476494 IGHV3-11P01762 117 aa4.8□□□□□ -1.64
CLDN4-205ENST00000476494 CD5P06127 495 aa4.8□□□□□ -1.64
CLDN4-205ENST00000476494 RPL7P18124 248 aaKnown RBP4.8□□□□□ -1.64
CLDN4-205ENST00000476494 S100A1P23297 94 aa4.8□□□□□ -1.64
CLDN4-205ENST00000476494 CRYBB3P26998 211 aa4.8□□□□□ -1.64
CLDN4-205ENST00000476494 GCHFRP30047 84 aa4.8□□□□□ -1.64
CLDN4-205ENST00000476494 MEOX2P50222 304 aa4.8□□□□□ -1.64
CLDN4-205ENST00000476494 GUK1Q16774 197 aa4.8□□□□□ -1.64
CLDN4-205ENST00000476494 ZNF506Q5JVG8 444 aa4.8□□□□□ -1.64
CLDN4-205ENST00000476494 MIR17HGQ75NE6 70 aa4.8□□□□□ -1.64
CLDN4-205ENST00000476494 BPIFA4PQ86YQ2 179 aa4.8□□□□□ -1.64
CLDN4-205ENST00000476494 PHLDA1Q8WV24 401 aaPredicted RBP4.8□□□□□ -1.64
CLDN4-205ENST00000476494 GRAMD2BQ96HH9 432 aa4.8□□□□□ -1.64
CLDN4-205ENST00000476494 FAM167A-AS1Q96KT0 104 aa4.8□□□□□ -1.64
CLDN4-205ENST00000476494 TCEAL7Q9BRU2 100 aa4.8□□□□□ -1.64
CLDN4-205ENST00000476494 PAXXQ9BUH6 204 aa4.8□□□□□ -1.64
CLDN4-205ENST00000476494 EIF5A2Q9GZV4 153 aaKnown RBP4.8□□□□□ -1.64
CLDN4-205ENST00000476494 OR51M1Q9H341 326 aa4.8□□□□□ -1.64
CLDN4-205ENST00000476494 TMEM231Q9H6L2 316 aa4.8□□□□□ -1.64
CLDN4-205ENST00000476494 ZFAND3Q9H8U3 227 aa4.8□□□□□ -1.64
CLDN4-205ENST00000476494 DOK5Q9P104 306 aa4.8□□□□□ -1.64
CLDN4-205ENST00000476494 VAX2Q9UIW0 290 aa4.8□□□□□ -1.64
CLDN4-205ENST00000476494 UFC1Q9Y3C8 167 aa4.8□□□□□ -1.64
CLDN4-205ENST00000476494 AGRNO00468 2067 aa4.8□□□□□ -1.64
CLDN4-205ENST00000476494 A0A0J9YWU9 116 aa4.79□□□□□ -1.64
CLDN4-205ENST00000476494 A0A1W2PRE2 83 aa4.79□□□□□ -1.64
CLDN4-205ENST00000476494 ZNF98A6NK75 572 aa4.79□□□□□ -1.64
CLDN4-205ENST00000476494 KRBOX1C9JBD0 128 aa4.79□□□□□ -1.64
CLDN4-205ENST00000476494 PPP5D1E7EU14 171 aa4.79□□□□□ -1.64
CLDN4-205ENST00000476494 OR7C2O60412 319 aa4.79□□□□□ -1.64
CLDN4-205ENST00000476494 RBMY1CP0DJD4 496 aa4.79□□□□□ -1.64
CLDN4-205ENST00000476494 ARL14EPLP0DKL9 152 aa4.79□□□□□ -1.64
CLDN4-205ENST00000476494 HIST1H1EP10412 219 aaKnown RBP4.79□□□□□ -1.64
CLDN4-205ENST00000476494 BCL2P10415 239 aa4.79□□□□□ -1.64
CLDN4-205ENST00000476494 FGF8P55075 233 aaPredicted RBP4.79□□□□□ -1.64
CLDN4-205ENST00000476494 CCL20P78556 96 aa4.79□□□□□ -1.64
CLDN4-205ENST00000476494 DEFA5Q01523 94 aa4.79□□□□□ -1.64
CLDN4-205ENST00000476494 USF2Q15853 346 aaPredicted RBP4.79□□□□□ -1.64
CLDN4-205ENST00000476494 RPEL1Q2QD12 228 aa4.79□□□□□ -1.64
CLDN4-205ENST00000476494 SSX7Q7RTT5 188 aa4.79□□□□□ -1.64
CLDN4-205ENST00000476494 IQCF2Q8IXL9 164 aa4.79□□□□□ -1.64
CLDN4-205ENST00000476494 SLC7A5P1Q8MH63 180 aa4.79□□□□□ -1.64
CLDN4-205ENST00000476494 LYPD1Q8N2G4 141 aa4.79□□□□□ -1.64
CLDN4-205ENST00000476494 ELOVL1Q9BW60 279 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms