RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 TAS2R45P59539 299 aa21.81■■□□□ 1.08
HOXB3-208ENST00000476342 KIR2DL5AQ8N109 375 aa21.81■■□□□ 1.08
HOXB3-208ENST00000476342 KIR2DL5BQ8NHK3 375 aa21.81■■□□□ 1.08
HOXB3-208ENST00000476342 TM2D3Q9BRN9 247 aa21.81■■□□□ 1.08
HOXB3-208ENST00000476342 SH3BGRL3Q9H299 93 aa21.81■■□□□ 1.08
HOXB3-208ENST00000476342 CYTL1Q9NRR1 136 aa21.81■■□□□ 1.08
HOXB3-208ENST00000476342 A0A1W2PPV4 95 aa21.8■■□□□ 1.08
HOXB3-208ENST00000476342 SNRPCP09234 159 aaKnown RBP21.8■■□□□ 1.08
HOXB3-208ENST00000476342 OR10G4Q8NGN3 311 aa21.8■■□□□ 1.08
HOXB3-208ENST00000476342 OR10G9Q8NGN4 311 aa21.8■■□□□ 1.08
HOXB3-208ENST00000476342 OR10G7Q8NGN6 311 aa21.8■■□□□ 1.08
HOXB3-208ENST00000476342 FAM167A-AS1Q96KT0 104 aa21.8■■□□□ 1.08
HOXB3-208ENST00000476342 AGRNO00468 2067 aa21.8■■□□□ 1.08
HOXB3-208ENST00000476342 TRAV8-2A0A0B4J237 113 aa21.8■■□□□ 1.08
HOXB3-208ENST00000476342 H3BQ15 152 aa21.8■■□□□ 1.08
HOXB3-208ENST00000476342 BCL2L11O43521 198 aa21.8■■□□□ 1.08
HOXB3-208ENST00000476342 HIST1H1EP10412 219 aaKnown RBP21.8■■□□□ 1.08
HOXB3-208ENST00000476342 RAB2AP61019 212 aa21.8■■□□□ 1.08
HOXB3-208ENST00000476342 KHDC3LQ587J8 217 aa21.8■■□□□ 1.08
HOXB3-208ENST00000476342 FOXI2Q6ZQN5 318 aa21.8■■□□□ 1.08
HOXB3-208ENST00000476342 SPATA25Q9BR10 227 aa21.8■■□□□ 1.08
HOXB3-208ENST00000476342 OR51M1Q9H341 326 aa21.8■■□□□ 1.08
HOXB3-208ENST00000476342 ZNF331Q9NQX6 463 aaPredicted RBP21.8■■□□□ 1.08
HOXB3-208ENST00000476342 PFDN1O60925 122 aa21.79■■□□□ 1.08
HOXB3-208ENST00000476342 PYYP10082 97 aa21.79■■□□□ 1.08
HOXB3-208ENST00000476342 C20orf173Q96LM9 149 aa21.79■■□□□ 1.08
HOXB3-208ENST00000476342 HYLS1Q96M11 299 aa21.79■■□□□ 1.08
HOXB3-208ENST00000476342 SAV1Q9H4B6 383 aaPredicted RBP21.79■■□□□ 1.08
HOXB3-208ENST00000476342 COL7A1Q02388 2944 aa21.78■■□□□ 1.08
HOXB3-208ENST00000476342 UBE2CO00762 179 aa21.78■■□□□ 1.08
HOXB3-208ENST00000476342 OR7C2O60412 319 aa21.78■■□□□ 1.08
HOXB3-208ENST00000476342 IGFL4Q6B9Z1 124 aa21.78■■□□□ 1.08
HOXB3-208ENST00000476342 EBLN2Q6P2I7 272 aa21.78■■□□□ 1.08
HOXB3-208ENST00000476342 TRPT1Q86TN4 253 aaKnown RBP21.78■■□□□ 1.08
HOXB3-208ENST00000476342 RNF182Q8N6D2 247 aa21.78■■□□□ 1.08
HOXB3-208ENST00000476342 PAXXQ9BUH6 204 aa21.78■■□□□ 1.08
HOXB3-208ENST00000476342 ZNF586Q9NXT0 402 aa21.78■■□□□ 1.08
HOXB3-208ENST00000476342 CLEC5AQ9NY25 188 aa21.78■■□□□ 1.08
HOXB3-208ENST00000476342 H3BTX0 84 aa21.77■■□□□ 1.08
HOXB3-208ENST00000476342 ZNF253O75346 499 aa21.77■■□□□ 1.08
HOXB3-208ENST00000476342 HLA-DRB4P13762 266 aa21.77■■□□□ 1.08
HOXB3-208ENST00000476342 PDE6HQ13956 83 aa21.77■■□□□ 1.08
HOXB3-208ENST00000476342 FAM122CQ6P4D5 195 aa21.77■■□□□ 1.08
HOXB3-208ENST00000476342 TMUB2Q71RG4 321 aa21.77■■□□□ 1.08
HOXB3-208ENST00000476342 SAT2Q96F10 170 aaPredicted RBP21.77■■□□□ 1.08
HOXB3-208ENST00000476342 ZNF471Q9BX82 626 aaPredicted RBP21.77■■□□□ 1.08
HOXB3-208ENST00000476342 CSTL1Q9H114 145 aa21.77■■□□□ 1.08
HOXB3-208ENST00000476342 HLA-DRB4X5D2U9 266 aa21.77■■□□□ 1.08
HOXB3-208ENST00000476342 TRBV19A0A075B6N1 114 aa21.76■■□□□ 1.07
HOXB3-208ENST00000476342 SLC17A3O00476 420 aa21.76■■□□□ 1.07
HOXB3-208ENST00000476342 ZNF738Q8NE65 137 aa21.76■■□□□ 1.07
HOXB3-208ENST00000476342 H3BMM0 161 aa21.75■■□□□ 1.07
HOXB3-208ENST00000476342 CDC34P49427 236 aaPredicted RBP21.75■■□□□ 1.07
HOXB3-208ENST00000476342 EIF5AP63241 154 aaKnown RBP21.75■■□□□ 1.07
HOXB3-208ENST00000476342 PSG3Q16557 428 aa21.75■■□□□ 1.07
HOXB3-208ENST00000476342 SPP1P10451 314 aa21.74■■□□□ 1.07
HOXB3-208ENST00000476342 TMEM41BQ5BJD5 291 aa21.74■■□□□ 1.07
HOXB3-208ENST00000476342 MORN3Q6PF18 240 aaPredicted RBP21.74■■□□□ 1.07
HOXB3-208ENST00000476342 RNF141Q8WVD5 230 aa21.74■■□□□ 1.07
HOXB3-208ENST00000476342 OR10J4P0C629 311 aa21.73■■□□□ 1.07
HOXB3-208ENST00000476342 DEFB1P60022 68 aa21.73■■□□□ 1.07
HOXB3-208ENST00000476342 PSG9Q00887 426 aa21.73■■□□□ 1.07
HOXB3-208ENST00000476342 GDF5OSQ5U4N7 250 aa21.73■■□□□ 1.07
HOXB3-208ENST00000476342 PQLC2Q6ZP29 291 aa21.73■■□□□ 1.07
HOXB3-208ENST00000476342 RPP25LQ8N5L8 163 aaKnown RBP21.73■■□□□ 1.07
HOXB3-208ENST00000476342 BLNKQ8WV28 456 aa21.73■■□□□ 1.07
HOXB3-208ENST00000476342 A0A0J9YX75 114 aa21.72■■□□□ 1.07
HOXB3-208ENST00000476342 NBEAP1P0C6P0 100 aa21.72■■□□□ 1.07
HOXB3-208ENST00000476342 HLA-DMBP28068 263 aa21.72■■□□□ 1.07
HOXB3-208ENST00000476342 NUTF2P61970 127 aaKnown RBP21.72■■□□□ 1.07
HOXB3-208ENST00000476342 UBE2L3P68036 154 aaKnown RBP21.72■■□□□ 1.07
HOXB3-208ENST00000476342 AKR1C8PQ5T2L2 129 aa21.72■■□□□ 1.07
HOXB3-208ENST00000476342 Q6ZWC4 215 aa21.72■■□□□ 1.07
HOXB3-208ENST00000476342 FXYD5Q96DB9 178 aa21.72■■□□□ 1.07
HOXB3-208ENST00000476342 F6UB75 175 aa21.72■■□□□ 1.07
HOXB3-208ENST00000476342 LGALSLQ3ZCW2 172 aaPredicted RBP21.72■■□□□ 1.07
HOXB3-208ENST00000476342 ZFP69Q49AA0 526 aa21.72■■□□□ 1.07
HOXB3-208ENST00000476342 U3KQK5 164 aa21.72■■□□□ 1.07
HOXB3-208ENST00000476342 CA1P00915 261 aaPredicted RBP21.71■■□□□ 1.07
HOXB3-208ENST00000476342 CD300CQ08708 224 aa21.71■■□□□ 1.07
HOXB3-208ENST00000476342 OR4B1Q8NGF8 309 aa21.71■■□□□ 1.07
HOXB3-208ENST00000476342 ZNF503Q96F45 646 aa21.71■■□□□ 1.07
HOXB3-208ENST00000476342 RCHY1Q96PM5 261 aa21.71■■□□□ 1.07
HOXB3-208ENST00000476342 ACTR3CQ9C0K3 210 aaPredicted RBP21.71■■□□□ 1.07
HOXB3-208ENST00000476342 RAB24Q969Q5 203 aa21.7■■□□□ 1.06
HOXB3-208ENST00000476342 RPUSD4Q96CM3 377 aaKnown RBP21.7■■□□□ 1.06
HOXB3-208ENST00000476342 CLUHP3Q96NS8 147 aa21.7■■□□□ 1.06
HOXB3-208ENST00000476342 AAMDCQ9H7C9 122 aa21.7■■□□□ 1.06
HOXB3-208ENST00000476342 HUWE1Q7Z6Z7 4374 aaKnown RBP21.69■■□□□ 1.06
HOXB3-208ENST00000476342 EIF3GO75821 320 aaKnown RBP eCLIP21.69■■□□□ 1.06
HOXB3-208ENST00000476342 DUSP14O95147 198 aaKnown RBP21.69■■□□□ 1.06
HOXB3-208ENST00000476342 NDUFB4O95168 129 aa21.69■■□□□ 1.06
HOXB3-208ENST00000476342 DEFB135Q30KP9 77 aa21.69■■□□□ 1.06
HOXB3-208ENST00000476342 NBEAL2Q6ZNJ1 2754 aa21.69■■□□□ 1.06
HOXB3-208ENST00000476342 SEC11BP0C7V7 166 aa21.68■■□□□ 1.06
HOXB3-208ENST00000476342 STAG3L2P0CL84 134 aa21.68■■□□□ 1.06
HOXB3-208ENST00000476342 STAG3L3P0CL85 134 aa21.68■■□□□ 1.06
HOXB3-208ENST00000476342 TPT1P13693 172 aaKnown RBP21.68■■□□□ 1.06
HOXB3-208ENST00000476342 RETNQ9HD89 108 aa21.68■■□□□ 1.06
HOXB3-208ENST00000476342 TP53TG1Q9Y2A0 90 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms