RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 GPR82Q96P67 336 aa11.8□□□□□ -0.52
CPSF3-203ENST00000475482 TMPRSS5Q9H3S3 457 aa11.8□□□□□ -0.52
CPSF3-203ENST00000475482 ZFAND3Q9H8U3 227 aa11.8□□□□□ -0.52
CPSF3-203ENST00000475482 ZNF98A6NK75 572 aa11.79□□□□□ -0.52
CPSF3-203ENST00000475482 RPL7P18124 248 aaKnown RBP11.79□□□□□ -0.52
CPSF3-203ENST00000475482 C1orf194Q5T5A4 169 aa11.79□□□□□ -0.52
CPSF3-203ENST00000475482 ADAMTSL5Q6ZMM2 481 aa11.79□□□□□ -0.52
CPSF3-203ENST00000475482 GPHB5Q86YW7 130 aa11.79□□□□□ -0.52
CPSF3-203ENST00000475482 SBSPONQ8IVN8 264 aa11.79□□□□□ -0.52
CPSF3-203ENST00000475482 ASCL2Q99929 193 aa11.79□□□□□ -0.52
CPSF3-203ENST00000475482 SLC35B3Q9H1N7 401 aa11.79□□□□□ -0.52
CPSF3-203ENST00000475482 TRAV5A0A0B4J249 113 aa11.78□□□□□ -0.52
CPSF3-203ENST00000475482 IGHV3-35A0A0C4DH35 117 aa11.78□□□□□ -0.52
CPSF3-203ENST00000475482 TMEM218A2RU14 115 aa11.78□□□□□ -0.52
CPSF3-203ENST00000475482 PDE6DO43924 150 aa11.78□□□□□ -0.52
CPSF3-203ENST00000475482 PAGE4O60829 102 aa11.78□□□□□ -0.52
CPSF3-203ENST00000475482 EIF3GO75821 320 aaKnown RBP eCLIP11.78□□□□□ -0.52
CPSF3-203ENST00000475482 FRMD6-AS1P0C7T7 363 aa11.78□□□□□ -0.52
CPSF3-203ENST00000475482 BMI1P35226 326 aa11.78□□□□□ -0.52
CPSF3-203ENST00000475482 ICAM4Q14773 271 aa11.78□□□□□ -0.52
CPSF3-203ENST00000475482 MORN5Q5VZ52 161 aa11.78□□□□□ -0.52
CPSF3-203ENST00000475482 CST9LP1Q5W188 147 aa11.78□□□□□ -0.52
CPSF3-203ENST00000475482 RXFP4Q8TDU9 374 aa11.78□□□□□ -0.52
CPSF3-203ENST00000475482 GRAMD2BQ96HH9 432 aa11.78□□□□□ -0.52
CPSF3-203ENST00000475482 RARRES2Q99969 163 aa11.78□□□□□ -0.52
CPSF3-203ENST00000475482 C20orf24Q9BUV8 137 aa11.78□□□□□ -0.52
CPSF3-203ENST00000475482 SCRT1Q9BWW7 348 aa11.78□□□□□ -0.52
CPSF3-203ENST00000475482 TMEM231Q9H6L2 316 aa11.78□□□□□ -0.52
CPSF3-203ENST00000475482 C19orf73Q9NVV2 129 aa11.78□□□□□ -0.52
CPSF3-203ENST00000475482 A0A1W2PRE2 83 aa11.77□□□□□ -0.53
CPSF3-203ENST00000475482 A0A1W2PS18 150 aa11.77□□□□□ -0.53
CPSF3-203ENST00000475482 C11orf94C9JXX5 98 aa11.77□□□□□ -0.53
CPSF3-203ENST00000475482 F6UZH7 168 aa11.77□□□□□ -0.53
CPSF3-203ENST00000475482 OR10J4P0C629 311 aa11.77□□□□□ -0.53
CPSF3-203ENST00000475482 OR8I2Q8N0Y5 310 aa11.77□□□□□ -0.53
CPSF3-203ENST00000475482 PEMTQ9UBM1 199 aa11.77□□□□□ -0.53
CPSF3-203ENST00000475482 UFC1Q9Y3C8 167 aa11.77□□□□□ -0.53
CPSF3-203ENST00000475482 NBEAL2Q6ZNJ1 2754 aa11.77□□□□□ -0.53
CPSF3-203ENST00000475482 TMEM250H0YL14 139 aa11.76□□□□□ -0.53
CPSF3-203ENST00000475482 K7EMT4 169 aa11.76□□□□□ -0.53
CPSF3-203ENST00000475482 LGALS9O00182 355 aa11.76□□□□□ -0.53
CPSF3-203ENST00000475482 NBEAP1P0C6P0 100 aa11.76□□□□□ -0.53
CPSF3-203ENST00000475482 SFTA3P0C7M3 94 aa11.76□□□□□ -0.53
CPSF3-203ENST00000475482 HIST1H1EP10412 219 aaKnown RBP11.76□□□□□ -0.53
CPSF3-203ENST00000475482 CRYBB3P26998 211 aa11.76□□□□□ -0.53
CPSF3-203ENST00000475482 UBE2G2P60604 165 aa11.76□□□□□ -0.53
CPSF3-203ENST00000475482 SRSF3P84103 164 aaKnown RBP11.76□□□□□ -0.53
CPSF3-203ENST00000475482 OR2K2Q8NGT1 345 aa11.76□□□□□ -0.53
CPSF3-203ENST00000475482 ZNF503Q96F45 646 aa11.76□□□□□ -0.53
CPSF3-203ENST00000475482 TCEAL7Q9BRU2 100 aa11.76□□□□□ -0.53
CPSF3-203ENST00000475482 SEC11CQ9BY50 192 aa11.76□□□□□ -0.53
CPSF3-203ENST00000475482 DAZ1Q9NQZ3 744 aaKnown RBP11.76□□□□□ -0.53
CPSF3-203ENST00000475482 ZNF320A2RRD8 509 aa11.75□□□□□ -0.53
CPSF3-203ENST00000475482 IZUMO1RA6ND01 250 aa11.75□□□□□ -0.53
CPSF3-203ENST00000475482 FAM74A7A6NL05 159 aa11.75□□□□□ -0.53
CPSF3-203ENST00000475482 F8W036 122 aa11.75□□□□□ -0.53
CPSF3-203ENST00000475482 IGHV4-30-4P0DP06 118 aa11.75□□□□□ -0.53
CPSF3-203ENST00000475482 PYYP10082 97 aa11.75□□□□□ -0.53
CPSF3-203ENST00000475482 GALR1P47211 349 aa11.75□□□□□ -0.53
CPSF3-203ENST00000475482 MEOX2P50222 304 aa11.75□□□□□ -0.53
CPSF3-203ENST00000475482 SOHLH1Q5JUK2 328 aa11.75□□□□□ -0.53
CPSF3-203ENST00000475482 LEMD1Q68G75 181 aa11.75□□□□□ -0.53
CPSF3-203ENST00000475482 FXYD5Q96DB9 178 aa11.75□□□□□ -0.53
CPSF3-203ENST00000475482 BUB3O43684 328 aa11.74□□□□□ -0.53
CPSF3-203ENST00000475482 SRP19P09132 144 aaKnown RBP11.74□□□□□ -0.53
CPSF3-203ENST00000475482 ATF4P18848 351 aaPredicted RBP11.74□□□□□ -0.53
CPSF3-203ENST00000475482 PDE6HQ13956 83 aa11.74□□□□□ -0.53
CPSF3-203ENST00000475482 LCN12Q6JVE5 192 aa11.74□□□□□ -0.53
CPSF3-203ENST00000475482 LYPD1Q8N2G4 141 aa11.74□□□□□ -0.53
CPSF3-203ENST00000475482 TM2D3Q9BRN9 247 aa11.74□□□□□ -0.53
CPSF3-203ENST00000475482 IGHV3OR16-8A0A075B7F1 116 aa11.73□□□□□ -0.53
CPSF3-203ENST00000475482 C2orf70A6NJV1 201 aa11.73□□□□□ -0.53
CPSF3-203ENST00000475482 A8MWP6 167 aa11.73□□□□□ -0.53
CPSF3-203ENST00000475482 CD81P60033 236 aa11.73□□□□□ -0.53
CPSF3-203ENST00000475482 DEFB114Q30KQ6 69 aa11.73□□□□□ -0.53
CPSF3-203ENST00000475482 RPUSD4Q96CM3 377 aaKnown RBP11.73□□□□□ -0.53
CPSF3-203ENST00000475482 ZNF414Q96IQ9 312 aa11.73□□□□□ -0.53
CPSF3-203ENST00000475482 U3KQE9 123 aa11.73□□□□□ -0.53
CPSF3-203ENST00000475482 DNAH7Q8WXX0 4024 aa11.72□□□□□ -0.53
CPSF3-203ENST00000475482 ZNF785A8K8V0 405 aa11.72□□□□□ -0.53
CPSF3-203ENST00000475482 IGLC2P0DOY2 106 aa11.72□□□□□ -0.53
CPSF3-203ENST00000475482 FOLR2P14207 255 aa11.72□□□□□ -0.53
CPSF3-203ENST00000475482 PSG9Q00887 426 aa11.72□□□□□ -0.53
CPSF3-203ENST00000475482 CD300EQ496F6 205 aaPredicted RBP11.72□□□□□ -0.53
CPSF3-203ENST00000475482 FAM74A3Q4VXF1 159 aa11.72□□□□□ -0.53
CPSF3-203ENST00000475482 UNQ9165/PRO28630Q6UXU0 137 aa11.72□□□□□ -0.53
CPSF3-203ENST00000475482 BLNKQ8WV28 456 aa11.72□□□□□ -0.53
CPSF3-203ENST00000475482 LINC00052Q96N35 136 aa11.72□□□□□ -0.53
CPSF3-203ENST00000475482 RCHY1Q96PM5 261 aa11.72□□□□□ -0.53
CPSF3-203ENST00000475482 YTHDF2Q9Y5A9 579 aaKnown RBP11.72□□□□□ -0.53
CPSF3-203ENST00000475482 TRBV19A0A075B6N1 114 aa11.71□□□□□ -0.53
CPSF3-203ENST00000475482 IGHV7-4-1A0A0J9YVY3 117 aa11.71□□□□□ -0.53
CPSF3-203ENST00000475482 TMEM213A2RRL7 107 aa11.71□□□□□ -0.53
CPSF3-203ENST00000475482 C9JQL5 133 aa11.71□□□□□ -0.53
CPSF3-203ENST00000475482 ZNF253O75346 499 aa11.71□□□□□ -0.53
CPSF3-203ENST00000475482 EDN2P20800 178 aa11.71□□□□□ -0.53
CPSF3-203ENST00000475482 ATP5G3P48201 142 aa11.71□□□□□ -0.53
CPSF3-203ENST00000475482 CEBPGP53567 150 aa11.71□□□□□ -0.53
CPSF3-203ENST00000475482 C10orf91Q5T1B1 145 aa11.71□□□□□ -0.53
CPSF3-203ENST00000475482 CYB561D1Q8N8Q1 229 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms