RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 LCE2AQ5TA79 106 aaPredicted RBP8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 MRPL54Q6P161 138 aaKnown RBP8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 PPP1R27Q86WC6 154 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 TOMM5Q8N4H5 51 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 ZNF491Q8N8L2 437 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 DUX3Q96PT4 197 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 C1QTNF4Q9BXJ3 329 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 KLK15Q9H2R5 256 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 ANXA10Q9UJ72 324 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 CYSLTR1Q9Y271 337 aa8.95□□□□□ -0.98
HLA-DOB-208ENST00000475235 PRKDCP78527 4128 aaKnown RBP8.94□□□□□ -0.98
HLA-DOB-208ENST00000475235 UCP3P55916 312 aa8.94□□□□□ -0.98
HLA-DOB-208ENST00000475235 TAS2R31P59538 309 aa8.94□□□□□ -0.98
HLA-DOB-208ENST00000475235 SRSF3P84103 164 aaKnown RBP8.94□□□□□ -0.98
HLA-DOB-208ENST00000475235 FHL3Q13643 280 aa8.94□□□□□ -0.98
HLA-DOB-208ENST00000475235 ZNF645Q8N7E2 425 aa8.94□□□□□ -0.98
HLA-DOB-208ENST00000475235 ZNRF2Q8NHG8 242 aa8.94□□□□□ -0.98
HLA-DOB-208ENST00000475235 BLNKQ8WV28 456 aa8.94□□□□□ -0.98
HLA-DOB-208ENST00000475235 ARPC1AQ92747 370 aa8.94□□□□□ -0.98
HLA-DOB-208ENST00000475235 SLC25A38Q96DW6 304 aa8.94□□□□□ -0.98
HLA-DOB-208ENST00000475235 ANAPC13Q9BS18 74 aa8.94□□□□□ -0.98
HLA-DOB-208ENST00000475235 ZNF471Q9BX82 626 aaPredicted RBP8.94□□□□□ -0.98
HLA-DOB-208ENST00000475235 OR2W1Q9Y3N9 320 aa8.94□□□□□ -0.98
HLA-DOB-208ENST00000475235 TRAV18A0A075B6X5 111 aa8.93□□□□□ -0.98
HLA-DOB-208ENST00000475235 FABP5P3A8MUU1 101 aa8.93□□□□□ -0.98
HLA-DOB-208ENST00000475235 ZNF705FA8MVS1 300 aaPredicted RBP8.93□□□□□ -0.98
HLA-DOB-208ENST00000475235 ZNF705DP0CH99 300 aaPredicted RBP8.93□□□□□ -0.98
HLA-DOB-208ENST00000475235 ZNF705BP0CI00 300 aaPredicted RBP8.93□□□□□ -0.98
HLA-DOB-208ENST00000475235 DUTP33316 252 aaKnown RBP8.93□□□□□ -0.98
HLA-DOB-208ENST00000475235 FXYD3Q14802 87 aa8.93□□□□□ -0.98
HLA-DOB-208ENST00000475235 TDRG1Q3Y452 100 aa8.93□□□□□ -0.98
HLA-DOB-208ENST00000475235 BTNL8Q6UX41 500 aa8.93□□□□□ -0.98
HLA-DOB-208ENST00000475235 DEFB125Q8N687 156 aa8.93□□□□□ -0.98
HLA-DOB-208ENST00000475235 OR2G3Q8NGZ4 309 aa8.93□□□□□ -0.98
HLA-DOB-208ENST00000475235 SAMD10Q9BYL1 202 aa8.93□□□□□ -0.98
HLA-DOB-208ENST00000475235 FNDC4Q9H6D8 234 aaPredicted RBP8.93□□□□□ -0.98
HLA-DOB-208ENST00000475235 GNB4Q9HAV0 340 aa8.93□□□□□ -0.98
HLA-DOB-208ENST00000475235 PLXNB1O43157 2135 aa8.92□□□□□ -0.98
HLA-DOB-208ENST00000475235 AGPAT2O15120 278 aa8.92□□□□□ -0.98
HLA-DOB-208ENST00000475235 HSBP1O75506 76 aa8.92□□□□□ -0.98
HLA-DOB-208ENST00000475235 IGLV2-23P01705 113 aa8.92□□□□□ -0.98
HLA-DOB-208ENST00000475235 EGR2P11161 476 aaPredicted RBP8.92□□□□□ -0.98
HLA-DOB-208ENST00000475235 HOXD3P31249 432 aaPredicted RBP8.92□□□□□ -0.98
HLA-DOB-208ENST00000475235 CTRLP40313 264 aa8.92□□□□□ -0.98
HLA-DOB-208ENST00000475235 VMA21Q3ZAQ7 101 aa8.92□□□□□ -0.98
HLA-DOB-208ENST00000475235 C9orf66Q5T8R8 295 aa8.92□□□□□ -0.98
HLA-DOB-208ENST00000475235 OSR1Q8TAX0 266 aaPredicted RBP8.92□□□□□ -0.98
HLA-DOB-208ENST00000475235 DDB2Q92466 427 aa8.92□□□□□ -0.98
HLA-DOB-208ENST00000475235 S100A16Q96FQ6 103 aaKnown RBP8.92□□□□□ -0.98
HLA-DOB-208ENST00000475235 FAM103A1Q9BTL3 118 aaKnown RBP8.92□□□□□ -0.98
HLA-DOB-208ENST00000475235 A0A0G2JLM5 398 aa8.91□□□□□ -0.98
HLA-DOB-208ENST00000475235 H3BUA1 57 aa8.91□□□□□ -0.98
HLA-DOB-208ENST00000475235 TCL1AP56279 114 aa8.91□□□□□ -0.98
HLA-DOB-208ENST00000475235 KRTAP10-11P60412 298 aa8.91□□□□□ -0.98
HLA-DOB-208ENST00000475235 LCE2CQ5TA81 110 aa8.91□□□□□ -0.98
HLA-DOB-208ENST00000475235 HOGA1Q86XE5 327 aa8.91□□□□□ -0.98
HLA-DOB-208ENST00000475235 TEX45Q8NA69 505 aa8.91□□□□□ -0.98
HLA-DOB-208ENST00000475235 OR4A16Q8NH70 328 aa8.91□□□□□ -0.98
HLA-DOB-208ENST00000475235 ENY2Q9NPA8 101 aa8.91□□□□□ -0.98
HLA-DOB-208ENST00000475235 TPSG1Q9NRR2 321 aa8.91□□□□□ -0.98
HLA-DOB-208ENST00000475235 LINC00473A8K010 186 aa8.9□□□□□ -0.98
HLA-DOB-208ENST00000475235 M0R2Z0 102 aa8.9□□□□□ -0.98
HLA-DOB-208ENST00000475235 TAX1BP3O14907 124 aa8.9□□□□□ -0.98
HLA-DOB-208ENST00000475235 CRYGDP07320 174 aa8.9□□□□□ -0.98
HLA-DOB-208ENST00000475235 LGALS1P09382 135 aaKnown RBP8.9□□□□□ -0.98
HLA-DOB-208ENST00000475235 IGLC2P0DOY2 106 aa8.9□□□□□ -0.98
HLA-DOB-208ENST00000475235 IGLC3P0DOY3 106 aa8.9□□□□□ -0.98
HLA-DOB-208ENST00000475235 INSL3P51460 131 aa8.9□□□□□ -0.98
HLA-DOB-208ENST00000475235 TPPP2P59282 170 aa8.9□□□□□ -0.98
HLA-DOB-208ENST00000475235 GNB1P62873 340 aa8.9□□□□□ -0.98
HLA-DOB-208ENST00000475235 DGCR2P98153 550 aa8.9□□□□□ -0.98
HLA-DOB-208ENST00000475235 PMVKQ15126 192 aa8.9□□□□□ -0.98
HLA-DOB-208ENST00000475235 MSMO1Q15800 293 aa8.9□□□□□ -0.98
HLA-DOB-208ENST00000475235 UBE2NLQ5JXB2 153 aa8.9□□□□□ -0.98
HLA-DOB-208ENST00000475235 APRG1Q8IVJ8 170 aa8.9□□□□□ -0.98
HLA-DOB-208ENST00000475235 TTC9CQ8N5M4 171 aa8.9□□□□□ -0.98
HLA-DOB-208ENST00000475235 HSD17B10Q99714 261 aaKnown RBP8.9□□□□□ -0.98
HLA-DOB-208ENST00000475235 SLC35B3Q9H1N7 401 aa8.9□□□□□ -0.98
HLA-DOB-208ENST00000475235 LOC102724200A0A096LPH7 203 aaPredicted RBP8.9□□□□□ -0.99
HLA-DOB-208ENST00000475235 SRRM4A7MD48 611 aaKnown RBP8.9□□□□□ -0.99
HLA-DOB-208ENST00000475235 LINC01619G3V211 115 aa8.9□□□□□ -0.99
HLA-DOB-208ENST00000475235 K7EIL1 84 aa8.9□□□□□ -0.99
HLA-DOB-208ENST00000475235 FCGR3BO75015 233 aa8.9□□□□□ -0.99
HLA-DOB-208ENST00000475235 AKAIN1P0CW23 69 aa8.9□□□□□ -0.99
HLA-DOB-208ENST00000475235 ZNF66Q6ZN08 573 aa8.9□□□□□ -0.99
HLA-DOB-208ENST00000475235 SMIM3Q9BZL3 60 aa8.9□□□□□ -0.99
HLA-DOB-208ENST00000475235 DNAH3Q8TD57 4116 aa8.89□□□□□ -0.99
HLA-DOB-208ENST00000475235 IGKV1D-13A0A0B4J2D9 117 aa8.89□□□□□ -0.99
HLA-DOB-208ENST00000475235 UMAD1C9J7I0 102 aa8.89□□□□□ -0.99
HLA-DOB-208ENST00000475235 IGLV2-14P01704 120 aa8.89□□□□□ -0.99
HLA-DOB-208ENST00000475235 TRGV3P03979 118 aa8.89□□□□□ -0.99
HLA-DOB-208ENST00000475235 IGKV1-13P0DP09 117 aa8.89□□□□□ -0.99
HLA-DOB-208ENST00000475235 AADACP22760 399 aa8.89□□□□□ -0.99
HLA-DOB-208ENST00000475235 SRIP30626 198 aa8.89□□□□□ -0.99
HLA-DOB-208ENST00000475235 FCGR2CP31995 323 aa8.89□□□□□ -0.99
HLA-DOB-208ENST00000475235 FAM159AQ6UWV7 190 aa8.89□□□□□ -0.99
HLA-DOB-208ENST00000475235 Q6ZN92 141 aa8.89□□□□□ -0.99
HLA-DOB-208ENST00000475235 GVQW1Q8N7I0 195 aa8.89□□□□□ -0.99
HLA-DOB-208ENST00000475235 VSTM2AQ8TAG5 236 aa8.89□□□□□ -0.99
HLA-DOB-208ENST00000475235 TMEM170AQ8WVE7 144 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms