RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 BAP18Q8IXM2 172 aa10.12□□□□□ -0.79
COL2A1-205ENST00000474996 RNF182Q8N6D2 247 aa10.12□□□□□ -0.79
COL2A1-205ENST00000474996 CIB3Q96Q77 187 aaPredicted RBP10.12□□□□□ -0.79
COL2A1-205ENST00000474996 ATG101Q9BSB4 218 aa10.12□□□□□ -0.79
COL2A1-205ENST00000474996 TMEM147Q9BVK8 224 aa10.12□□□□□ -0.79
COL2A1-205ENST00000474996 KRTAP4-5Q9BYR2 181 aa10.12□□□□□ -0.79
COL2A1-205ENST00000474996 LYRM9A8MSI8 78 aa10.11□□□□□ -0.79
COL2A1-205ENST00000474996 H3BP45 60 aa10.11□□□□□ -0.79
COL2A1-205ENST00000474996 ADAP1O75689 374 aa10.11□□□□□ -0.79
COL2A1-205ENST00000474996 GIPP09681 153 aaPredicted RBP10.11□□□□□ -0.79
COL2A1-205ENST00000474996 DEFB130BP0DP73 79 aa10.11□□□□□ -0.79
COL2A1-205ENST00000474996 DEFB130AP0DP74 79 aa10.11□□□□□ -0.79
COL2A1-205ENST00000474996 AKR1C1Q04828 323 aa10.11□□□□□ -0.79
COL2A1-205ENST00000474996 IL15RAQ13261 267 aa10.11□□□□□ -0.79
COL2A1-205ENST00000474996 SPANXN5Q5MJ07 72 aa10.11□□□□□ -0.79
COL2A1-205ENST00000474996 GPR82Q96P67 336 aa10.11□□□□□ -0.79
COL2A1-205ENST00000474996 MGAT4CQ9UBM8 478 aa10.11□□□□□ -0.79
COL2A1-205ENST00000474996 TRAV12-2A0A075B6T6 113 aa10.1□□□□□ -0.79
COL2A1-205ENST00000474996 H3BRN7 92 aa10.1□□□□□ -0.79
COL2A1-205ENST00000474996 GOSR2O14653 212 aa10.1□□□□□ -0.79
COL2A1-205ENST00000474996 HOXB5P09067 269 aa10.1□□□□□ -0.79
COL2A1-205ENST00000474996 AZU1P20160 251 aa10.1□□□□□ -0.79
COL2A1-205ENST00000474996 FAM3BP58499 235 aaPredicted RBP10.1□□□□□ -0.79
COL2A1-205ENST00000474996 ACOT7LQ6ZUV0 252 aa10.1□□□□□ -0.79
COL2A1-205ENST00000474996 TCTE3Q8IZS6 198 aa10.1□□□□□ -0.79
COL2A1-205ENST00000474996 ST6GAL2Q96JF0 529 aa10.1□□□□□ -0.79
COL2A1-205ENST00000474996 NMES1Q9C002 83 aa10.1□□□□□ -0.79
COL2A1-205ENST00000474996 PLAC8L1A1L4L8 177 aa10.09□□□□□ -0.79
COL2A1-205ENST00000474996 F5H768 121 aa10.09□□□□□ -0.79
COL2A1-205ENST00000474996 TSPOP30536 169 aa10.09□□□□□ -0.79
COL2A1-205ENST00000474996 S100A7P31151 101 aa10.09□□□□□ -0.79
COL2A1-205ENST00000474996 RAP2BP61225 183 aa10.09□□□□□ -0.79
COL2A1-205ENST00000474996 B2MP61769 119 aa10.09□□□□□ -0.79
COL2A1-205ENST00000474996 CYCSP99999 105 aaKnown RBP10.09□□□□□ -0.79
COL2A1-205ENST00000474996 TNP2Q05952 138 aa10.09□□□□□ -0.79
COL2A1-205ENST00000474996 AKAP14Q86UN6 197 aa10.09□□□□□ -0.79
COL2A1-205ENST00000474996 ZNF738Q8NE65 137 aa10.09□□□□□ -0.79
COL2A1-205ENST00000474996 SLC25A39Q9BZJ4 359 aaPredicted RBP10.09□□□□□ -0.79
COL2A1-205ENST00000474996 STRAPQ9Y3F4 350 aaKnown RBP10.09□□□□□ -0.79
COL2A1-205ENST00000474996 HSPG2P98160 4391 aa10.08□□□□□ -0.8
COL2A1-205ENST00000474996 SMCO3A2RU48 225 aa10.08□□□□□ -0.8
COL2A1-205ENST00000474996 BOLA2-SMG1P6H3BVE0 249 aa10.08□□□□□ -0.8
COL2A1-205ENST00000474996 CCSO14618 274 aa10.08□□□□□ -0.8
COL2A1-205ENST00000474996 CCNKO75909 580 aa10.08□□□□□ -0.8
COL2A1-205ENST00000474996 NUDT3O95989 172 aa10.08□□□□□ -0.8
COL2A1-205ENST00000474996 CYP2G1PQ6ZSU1 146 aa10.08□□□□□ -0.8
COL2A1-205ENST00000474996 TMEM144Q7Z5S9 345 aa10.08□□□□□ -0.8
COL2A1-205ENST00000474996 ZBTB8BQ8NAP8 495 aaPredicted RBP10.08□□□□□ -0.8
COL2A1-205ENST00000474996 ZNRF2Q8NHG8 242 aa10.08□□□□□ -0.8
COL2A1-205ENST00000474996 C2orf50Q96LR7 162 aa10.08□□□□□ -0.8
COL2A1-205ENST00000474996 SHANK2-AS3Q9BTD1 123 aa10.08□□□□□ -0.8
COL2A1-205ENST00000474996 NBDYA0A0U1RRE5 68 aa10.07□□□□□ -0.8
COL2A1-205ENST00000474996 C16orf90A8MZG2 172 aa10.07□□□□□ -0.8
COL2A1-205ENST00000474996 PRB4P10163 310 aaPredicted RBP10.07□□□□□ -0.8
COL2A1-205ENST00000474996 RHOBP62745 196 aa10.07□□□□□ -0.8
COL2A1-205ENST00000474996 HIST1H1AQ02539 215 aaPredicted RBP10.07□□□□□ -0.8
COL2A1-205ENST00000474996 IAH1Q2TAA2 248 aaPredicted RBP10.07□□□□□ -0.8
COL2A1-205ENST00000474996 UHRF2Q96PU4 802 aa10.07□□□□□ -0.8
COL2A1-205ENST00000474996 LINC01587Q99440 93 aa10.07□□□□□ -0.8
COL2A1-205ENST00000474996 HIGD1AQ9Y241 93 aa10.07□□□□□ -0.8
COL2A1-205ENST00000474996 C5orf51A6NDU8 294 aa10.06□□□□□ -0.8
COL2A1-205ENST00000474996 G3V3Q6 166 aa10.06□□□□□ -0.8
COL2A1-205ENST00000474996 HYPMO75409 117 aa10.06□□□□□ -0.8
COL2A1-205ENST00000474996 SIX6O95475 246 aa10.06□□□□□ -0.8
COL2A1-205ENST00000474996 ATP5G1P05496 136 aa10.06□□□□□ -0.8
COL2A1-205ENST00000474996 OR5G3P0C626 314 aa10.06□□□□□ -0.8
COL2A1-205ENST00000474996 LINC00869P0C866 280 aa10.06□□□□□ -0.8
COL2A1-205ENST00000474996 HTN1P15515 57 aa10.06□□□□□ -0.8
COL2A1-205ENST00000474996 RPL7P18124 248 aaKnown RBP10.06□□□□□ -0.8
COL2A1-205ENST00000474996 ATP5G3P48201 142 aa10.06□□□□□ -0.8
COL2A1-205ENST00000474996 POLR2GP62487 172 aaKnown RBP eCLIP10.06□□□□□ -0.8
COL2A1-205ENST00000474996 C6orf223Q8N319 242 aa10.06□□□□□ -0.8
COL2A1-205ENST00000474996 OR8A1Q8NGG7 326 aa10.06□□□□□ -0.8
COL2A1-205ENST00000474996 PPP1R14DQ9NXH3 145 aa10.06□□□□□ -0.8
COL2A1-205ENST00000474996 A0A087X0K7 114 aa10.05□□□□□ -0.8
COL2A1-205ENST00000474996 CBY3A6NI87 242 aa10.05□□□□□ -0.8
COL2A1-205ENST00000474996 CCL18P55774 89 aa10.05□□□□□ -0.8
COL2A1-205ENST00000474996 TAS2R60P59551 318 aa10.05□□□□□ -0.8
COL2A1-205ENST00000474996 ID3Q02535 119 aa10.05□□□□□ -0.8
COL2A1-205ENST00000474996 TMEM256Q8N2U0 113 aa10.05□□□□□ -0.8
COL2A1-205ENST00000474996 RNF141Q8WVD5 230 aa10.05□□□□□ -0.8
COL2A1-205ENST00000474996 PSENENQ9NZ42 101 aa10.05□□□□□ -0.8
COL2A1-205ENST00000474996 LINC00588Q9Y4M8 146 aa10.05□□□□□ -0.8
COL2A1-205ENST00000474996 PMS2P5A8MQ11 134 aa10.04□□□□□ -0.8
COL2A1-205ENST00000474996 FAM25EA8MYX2 175 aa10.04□□□□□ -0.8
COL2A1-205ENST00000474996 PFDN1O60925 122 aa10.04□□□□□ -0.8
COL2A1-205ENST00000474996 C1QBP02746 253 aa10.04□□□□□ -0.8
COL2A1-205ENST00000474996 PLP1P60201 277 aa10.04□□□□□ -0.8
COL2A1-205ENST00000474996 PSG3Q16557 428 aa10.04□□□□□ -0.8
COL2A1-205ENST00000474996 LRRC20Q8TCA0 184 aa10.04□□□□□ -0.8
COL2A1-205ENST00000474996 PPP1R1CQ8WVI7 109 aa10.04□□□□□ -0.8
COL2A1-205ENST00000474996 C16orf74Q96GX8 76 aa10.04□□□□□ -0.8
COL2A1-205ENST00000474996 SSSCA1O60232 199 aa10.03□□□□□ -0.8
COL2A1-205ENST00000474996 MBPP02686 304 aaPredicted RBP10.03□□□□□ -0.8
COL2A1-205ENST00000474996 PET100P0DJ07 73 aa10.03□□□□□ -0.8
COL2A1-205ENST00000474996 SELENOTP62341 195 aa10.03□□□□□ -0.8
COL2A1-205ENST00000474996 CD300CQ08708 224 aa10.03□□□□□ -0.8
COL2A1-205ENST00000474996 PATE2Q6UY27 113 aa10.03□□□□□ -0.8
COL2A1-205ENST00000474996 OR2T35Q8NGX2 323 aa10.03□□□□□ -0.8
COL2A1-205ENST00000474996 RPUSD4Q96CM3 377 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms