RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 OTORQ9NRC9 128 aa7.84□□□□□ -1.15
PRPF38A-202ENST00000474048 CLEC5AQ9NY25 188 aa7.84□□□□□ -1.15
PRPF38A-202ENST00000474048 ZFHX3Q15911 3703 aa7.83□□□□□ -1.16
PRPF38A-202ENST00000474048 TRBV19A0A075B6N1 114 aa7.83□□□□□ -1.16
PRPF38A-202ENST00000474048 A0A087X0K7 114 aa7.83□□□□□ -1.16
PRPF38A-202ENST00000474048 TMEM213A2RRL7 107 aa7.83□□□□□ -1.16
PRPF38A-202ENST00000474048 FAM74A7A6NL05 159 aa7.83□□□□□ -1.16
PRPF38A-202ENST00000474048 H3BTX0 84 aa7.83□□□□□ -1.16
PRPF38A-202ENST00000474048 ZNF253O75346 499 aa7.83□□□□□ -1.16
PRPF38A-202ENST00000474048 SAP30O75446 220 aa7.83□□□□□ -1.16
PRPF38A-202ENST00000474048 APOHP02749 345 aaPredicted RBP7.83□□□□□ -1.16
PRPF38A-202ENST00000474048 SNRPCP09234 159 aaKnown RBP7.83□□□□□ -1.16
PRPF38A-202ENST00000474048 SUMO1P63165 101 aaKnown RBP7.83□□□□□ -1.16
PRPF38A-202ENST00000474048 PRIMA1Q86XR5 153 aa7.83□□□□□ -1.16
PRPF38A-202ENST00000474048 SLC7A5P1Q8MH63 180 aa7.83□□□□□ -1.16
PRPF38A-202ENST00000474048 EIF4E3Q8N5X7 224 aaKnown RBP7.83□□□□□ -1.16
PRPF38A-202ENST00000474048 GLMPQ8WWB7 406 aa7.83□□□□□ -1.16
PRPF38A-202ENST00000474048 RPUSD4Q96CM3 377 aaKnown RBP7.83□□□□□ -1.16
PRPF38A-202ENST00000474048 CITED1Q99966 193 aa7.83□□□□□ -1.16
PRPF38A-202ENST00000474048 SLC35B3Q9H1N7 401 aa7.83□□□□□ -1.16
PRPF38A-202ENST00000474048 Q9H3A6 140 aa7.83□□□□□ -1.16
PRPF38A-202ENST00000474048 NRN1Q9NPD7 142 aa7.83□□□□□ -1.16
PRPF38A-202ENST00000474048 U3KQE9 123 aa7.83□□□□□ -1.16
PRPF38A-202ENST00000474048 PGPA6NDG6 321 aa7.82□□□□□ -1.16
PRPF38A-202ENST00000474048 KRBOX1C9JBD0 128 aa7.82□□□□□ -1.16
PRPF38A-202ENST00000474048 F8W036 122 aa7.82□□□□□ -1.16
PRPF38A-202ENST00000474048 TMEM250H0YL14 139 aa7.82□□□□□ -1.16
PRPF38A-202ENST00000474048 SFTA3P0C7M3 94 aa7.82□□□□□ -1.16
PRPF38A-202ENST00000474048 IGLC2P0DOY2 106 aa7.82□□□□□ -1.16
PRPF38A-202ENST00000474048 CD33P20138 364 aa7.82□□□□□ -1.16
PRPF38A-202ENST00000474048 AKR1C3P42330 323 aa7.82□□□□□ -1.16
PRPF38A-202ENST00000474048 ATP5G3P48201 142 aa7.82□□□□□ -1.16
PRPF38A-202ENST00000474048 CNN1P51911 297 aaKnown RBP7.82□□□□□ -1.16
PRPF38A-202ENST00000474048 UBE2G1P62253 170 aa7.82□□□□□ -1.16
PRPF38A-202ENST00000474048 SNRPD3P62318 126 aaKnown RBP7.82□□□□□ -1.16
PRPF38A-202ENST00000474048 ICAM4Q14773 271 aa7.82□□□□□ -1.16
PRPF38A-202ENST00000474048 SOHLH1Q5JUK2 328 aa7.82□□□□□ -1.16
PRPF38A-202ENST00000474048 C5orf17Q8NAS9 161 aa7.82□□□□□ -1.16
PRPF38A-202ENST00000474048 ZNF503Q96F45 646 aa7.82□□□□□ -1.16
PRPF38A-202ENST00000474048 ZNF414Q96IQ9 312 aa7.82□□□□□ -1.16
PRPF38A-202ENST00000474048 RARRES2Q99969 163 aa7.82□□□□□ -1.16
PRPF38A-202ENST00000474048 ZNF747Q9BV97 191 aa7.82□□□□□ -1.16
PRPF38A-202ENST00000474048 ZNF586Q9NXT0 402 aa7.82□□□□□ -1.16
PRPF38A-202ENST00000474048 PRELID1Q9Y255 219 aa7.82□□□□□ -1.16
PRPF38A-202ENST00000474048 C2CD3Q4AC94 2353 aa7.82□□□□□ -1.16
PRPF38A-202ENST00000474048 MAST4O15021 2626 aa7.81□□□□□ -1.16
PRPF38A-202ENST00000474048 SERTM2A0A1B0GWG4 89 aa7.81□□□□□ -1.16
PRPF38A-202ENST00000474048 H3BQ15 152 aa7.81□□□□□ -1.16
PRPF38A-202ENST00000474048 TFPI2P48307 235 aa7.81□□□□□ -1.16
PRPF38A-202ENST00000474048 KRTAP10-3P60369 221 aa7.81□□□□□ -1.16
PRPF38A-202ENST00000474048 ZNF674Q2M3X9 581 aa7.81□□□□□ -1.16
PRPF38A-202ENST00000474048 WFDC3Q8IUB2 231 aa7.81□□□□□ -1.16
PRPF38A-202ENST00000474048 HIST1H2BAQ96A08 127 aa7.81□□□□□ -1.16
PRPF38A-202ENST00000474048 MCRIP2Q9BUT9 160 aaKnown RBP7.81□□□□□ -1.16
PRPF38A-202ENST00000474048 YTHDF2Q9Y5A9 579 aaKnown RBP7.81□□□□□ -1.16
PRPF38A-202ENST00000474048 OR4C46A6NHA9 309 aa7.8□□□□□ -1.16
PRPF38A-202ENST00000474048 NDUFS6O75380 124 aaKnown RBP7.8□□□□□ -1.16
PRPF38A-202ENST00000474048 S100A1P23297 94 aa7.8□□□□□ -1.16
PRPF38A-202ENST00000474048 GUCA2BQ16661 112 aa7.8□□□□□ -1.16
PRPF38A-202ENST00000474048 LCN12Q6JVE5 192 aa7.8□□□□□ -1.16
PRPF38A-202ENST00000474048 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.8□□□□□ -1.16
PRPF38A-202ENST00000474048 GBGT1Q8N5D6 347 aa7.8□□□□□ -1.16
PRPF38A-202ENST00000474048 ZNF738Q8NE65 137 aa7.8□□□□□ -1.16
PRPF38A-202ENST00000474048 SMIM7Q9BQ49 75 aa7.8□□□□□ -1.16
PRPF38A-202ENST00000474048 NIPSNAP3BQ9BS92 247 aa7.8□□□□□ -1.16
PRPF38A-202ENST00000474048 ATG101Q9BSB4 218 aa7.8□□□□□ -1.16
PRPF38A-202ENST00000474048 GPR61Q9BZJ8 451 aa7.8□□□□□ -1.16
PRPF38A-202ENST00000474048 ZNF331Q9NQX6 463 aaPredicted RBP7.8□□□□□ -1.16
PRPF38A-202ENST00000474048 TRAV25A0A0B4J276 109 aa7.79□□□□□ -1.16
PRPF38A-202ENST00000474048 SCO2A0A1W2PP80 73 aa7.79□□□□□ -1.16
PRPF38A-202ENST00000474048 ADARB2-AS1A8MUL3 147 aa7.79□□□□□ -1.16
PRPF38A-202ENST00000474048 ZNF727A8MUV8 499 aa7.79□□□□□ -1.16
PRPF38A-202ENST00000474048 GGTLC3B5MD39 225 aa7.79□□□□□ -1.16
PRPF38A-202ENST00000474048 SLC17A3O00476 420 aa7.79□□□□□ -1.16
PRPF38A-202ENST00000474048 PEX7O00628 323 aa7.79□□□□□ -1.16
PRPF38A-202ENST00000474048 ISLRO14498 428 aa7.79□□□□□ -1.16
PRPF38A-202ENST00000474048 MRPS12O15235 138 aaKnown RBP7.79□□□□□ -1.16
PRPF38A-202ENST00000474048 ATP6V1G1O75348 118 aa7.79□□□□□ -1.16
PRPF38A-202ENST00000474048 S100A9P06702 114 aaKnown RBP7.79□□□□□ -1.16
PRPF38A-202ENST00000474048 CSN3P07498 182 aa7.79□□□□□ -1.16
PRPF38A-202ENST00000474048 FAM74A3Q4VXF1 159 aa7.79□□□□□ -1.16
PRPF38A-202ENST00000474048 C9orf66Q5T8R8 295 aa7.79□□□□□ -1.16
PRPF38A-202ENST00000474048 EXOC3-AS1Q8N2X6 119 aa7.79□□□□□ -1.16
PRPF38A-202ENST00000474048 CYB561D1Q8N8Q1 229 aa7.79□□□□□ -1.16
PRPF38A-202ENST00000474048 OR2K2Q8NGT1 345 aa7.79□□□□□ -1.16
PRPF38A-202ENST00000474048 C17orf77Q96MU5 243 aa7.79□□□□□ -1.16
PRPF38A-202ENST00000474048 LINC00052Q96N35 136 aa7.79□□□□□ -1.16
PRPF38A-202ENST00000474048 NDFIP1Q9BT67 221 aa7.79□□□□□ -1.16
PRPF38A-202ENST00000474048 MS4A6AQ9H2W1 248 aa7.79□□□□□ -1.16
PRPF38A-202ENST00000474048 SIGLEC8Q9NYZ4 499 aa7.79□□□□□ -1.16
PRPF38A-202ENST00000474048 MLXQ9UH92 298 aa7.79□□□□□ -1.16
PRPF38A-202ENST00000474048 EPDR1Q9UM22 224 aa7.79□□□□□ -1.16
PRPF38A-202ENST00000474048 ANK3Q12955 4377 aaKnown RBP7.79□□□□□ -1.16
PRPF38A-202ENST00000474048 TMEM218A2RU14 115 aa7.78□□□□□ -1.16
PRPF38A-202ENST00000474048 FBLL1A6NHQ2 334 aaKnown RBP7.78□□□□□ -1.16
PRPF38A-202ENST00000474048 NDUFB4O95168 129 aa7.78□□□□□ -1.16
PRPF38A-202ENST00000474048 SRP19P09132 144 aaKnown RBP7.78□□□□□ -1.16
PRPF38A-202ENST00000474048 INSL3P51460 131 aa7.78□□□□□ -1.16
PRPF38A-202ENST00000474048 CD81P60033 236 aa7.78□□□□□ -1.16
PRPF38A-202ENST00000474048 SRSF3P84103 164 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms