RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 OR2T8A6NH00 312 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 CRYM-AS1A6NIL9 109 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 CEBPZOSA8MTT3 80 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 SLC17A3O00476 420 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 PDE6DO43924 150 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 IFNA5P01569 189 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 HMGN2P05204 90 aaKnown RBP2.58□□□□□ -2
BRCA1-212ENST00000473961 DBIP07108 87 aaKnown RBP2.58□□□□□ -2
BRCA1-212ENST00000473961 HIST1H1CP16403 213 aaKnown RBP2.58□□□□□ -2
BRCA1-212ENST00000473961 REG1BP48304 166 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 RHOBP62745 196 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 SEC11AP67812 179 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 SERF2P84101 59 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 PSG9Q00887 426 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 RUNX1Q01196 453 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 FMODQ06828 376 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 PDGFRLQ15198 375 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 LTC4SQ16873 150 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 OR10J3Q5JRS4 329 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 SPIN3Q5JUX0 258 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 BVES-AS1Q5T3Y7 98 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 LINC01590Q5TEZ4 76 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 FA2HQ7L5A8 372 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 LRP11Q86VZ4 500 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 BAGE3Q86Y29 109 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 BAGE2Q86Y30 109 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 OR8I2Q8N0Y5 310 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 TMEM105Q8N8V8 129 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 OR2AE1Q8NHA4 323 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 PFN4Q8NHR9 129 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 FAM57AQ8TBR7 257 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 KLK6Q92876 244 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 BORCS7Q96B45 105 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 AP1S3Q96PC3 154 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 PMCHL2Q9BQD1 86 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 ANAPC13Q9BS18 74 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 TTTY10Q9BZA0 68 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 LINC00470Q9BZP3 86 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 ST20Q9HBF5 79 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 JPT1Q9UK76 154 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 ZNF443Q9Y2A4 671 aaPredicted RBP2.58□□□□□ -2
BRCA1-212ENST00000473961 IER3IP1Q9Y5U9 82 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 NUP210LQ5VU65 1888 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 PLXNB3Q9ULL4 1909 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 HEATR5AQ86XA9 2040 aa2.58□□□□□ -2
BRCA1-212ENST00000473961 PRRC2AP48634 2157 aaKnown RBP2.57□□□□□ -2
BRCA1-212ENST00000473961 TMEM131Q92545 1883 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 TRAV27A0A087WT01 109 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 TRAV8-2A0A0B4J237 113 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 PIGBOS1A0A0B4J2F0 54 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 A0A0D9SEW6 157 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 LOC102725191A0A1B0GVB3 256 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 ODAMA1E959 279 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 IGSF23A1L1A6 192 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 H3BRM9 83 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 K7EP34 96 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 ZNF737O75373 536 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 S1PR2O95136 353 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 GPR75O95800 540 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 CXorf1O96002 111 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 TNFP01375 233 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 IGLV3-27P01718 113 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 HLA-DRB1P01911 266 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 HBZP02008 142 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 GYPAP02724 150 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 MT-ND6P03923 174 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 ISG15P05161 165 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 ZNF32P17041 273 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 ALOX5APP20292 161 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 OPRM1P35372 400 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 ZNF93P35789 620 aaPredicted RBP2.57□□□□□ -2
BRCA1-212ENST00000473961 CCR2P41597 374 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 PSMB3P49720 205 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 GNG4P50150 75 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 QRFPP83859 136 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 MEF2BQ02080 365 aaPredicted RBP2.57□□□□□ -2
BRCA1-212ENST00000473961 MEF2CQ06413 473 aaPredicted RBP2.57□□□□□ -2
BRCA1-212ENST00000473961 SMAGPQ0VAQ4 97 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 HLA-DRB5Q30154 266 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 MRPL2Q5T653 305 aaKnown RBP2.57□□□□□ -2
BRCA1-212ENST00000473961 LCE1CQ5T751 118 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 LCE1BQ5T7P3 118 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 FAM78BQ5VT40 261 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 FAM104BQ5XKR9 115 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 LINC00596Q86U02 117 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 LYPD6Q86Y78 171 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 TMEM25Q86YD3 366 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 SLC22A24Q8N4F4 322 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 ST6GALNAC3Q8NDV1 305 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 OR51A4Q8NGJ6 313 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 OR10AC1Q8NH08 325 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 MRPL30Q8TCC3 161 aaKnown RBP2.57□□□□□ -2
BRCA1-212ENST00000473961 RNF133Q8WVZ7 376 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 SLC25A44Q96H78 314 aaPredicted RBP2.57□□□□□ -2
BRCA1-212ENST00000473961 GPX7Q96SL4 187 aaPredicted RBP2.57□□□□□ -2
BRCA1-212ENST00000473961 DERL1Q9BUN8 251 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 GNB1LQ9BYB4 327 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 GTSF1LQ9H1H1 148 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 C11orf1Q9H5F2 150 aa2.57□□□□□ -2
BRCA1-212ENST00000473961 MRPL16Q9NX20 251 aaKnown RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms