RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 FAM223BA6NKX1 122 aa4.79□□□□□ -1.64
CLK1-210ENST00000473565 ZNF705FA8MVS1 300 aaPredicted RBP4.79□□□□□ -1.64
CLK1-210ENST00000473565 IGLV1-40P01703 118 aa4.79□□□□□ -1.64
CLK1-210ENST00000473565 S100PP25815 95 aa4.79□□□□□ -1.64
CLK1-210ENST00000473565 RAB9AP51151 201 aa4.79□□□□□ -1.64
CLK1-210ENST00000473565 FLI1Q01543 452 aaPredicted RBP4.79□□□□□ -1.64
CLK1-210ENST00000473565 CFHR3Q02985 330 aa4.79□□□□□ -1.64
CLK1-210ENST00000473565 KRTAP1-1Q07627 177 aa4.79□□□□□ -1.64
CLK1-210ENST00000473565 PRNTQ86SH4 94 aa4.79□□□□□ -1.64
CLK1-210ENST00000473565 FAM223AQ8IWN6 122 aa4.79□□□□□ -1.64
CLK1-210ENST00000473565 RNF182Q8N6D2 247 aa4.79□□□□□ -1.64
CLK1-210ENST00000473565 OR4X2Q8NGF9 303 aa4.79□□□□□ -1.64
CLK1-210ENST00000473565 CMTM2Q8TAZ6 248 aa4.79□□□□□ -1.64
CLK1-210ENST00000473565 V9GYV3 84 aa4.79□□□□□ -1.64
CLK1-210ENST00000473565 TRBV24-1A0A075B6N3 115 aa4.79□□□□□ -1.64
CLK1-210ENST00000473565 ZNF320A2RRD8 509 aa4.79□□□□□ -1.64
CLK1-210ENST00000473565 BUB3O43684 328 aa4.79□□□□□ -1.64
CLK1-210ENST00000473565 SCGB2A1O75556 95 aa4.79□□□□□ -1.64
CLK1-210ENST00000473565 GCGP01275 180 aa4.79□□□□□ -1.64
CLK1-210ENST00000473565 TMEM183BQ1AE95 376 aa4.79□□□□□ -1.64
CLK1-210ENST00000473565 FRZBQ92765 325 aa4.79□□□□□ -1.64
CLK1-210ENST00000473565 HIVEP2P31629 2446 aa4.79□□□□□ -1.64
CLK1-210ENST00000473565 HIVEP1P15822 2718 aa4.79□□□□□ -1.64
CLK1-210ENST00000473565 IGKV3-7A0A075B6H7 116 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 IGKV2-40A0A087WW87 121 aaPredicted RBP4.78□□□□□ -1.64
CLK1-210ENST00000473565 IGKV2D-40P01614 121 aaPredicted RBP4.78□□□□□ -1.64
CLK1-210ENST00000473565 IGLV2-11P01706 119 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 RPLP1P05386 114 aaKnown RBP4.78□□□□□ -1.64
CLK1-210ENST00000473565 TAS2R60P59551 318 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 IBA57Q5T440 356 aaKnown RBP4.78□□□□□ -1.64
CLK1-210ENST00000473565 OR5R1Q8NH85 324 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 ZNF702PQ9H963 129 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 PRELID1Q9Y255 219 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 SORL1Q92673 2214 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 ZNF785A8K8V0 405 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 GGCTO75223 188 aaKnown RBP4.78□□□□□ -1.64
CLK1-210ENST00000473565 CD99P14209 185 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 RPL7P18124 248 aaKnown RBP4.78□□□□□ -1.64
CLK1-210ENST00000473565 SRP14P37108 136 aaKnown RBP4.78□□□□□ -1.64
CLK1-210ENST00000473565 C9orf139Q6ZV77 190 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 Q86TA4 180 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 Q8TAT8 98 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 PYGO2Q9BRQ0 406 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 YAE1D1Q9NRH1 226 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 LY96Q9Y6Y9 160 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 ZNF705GA8MUZ8 300 aaPredicted RBP4.78□□□□□ -1.64
CLK1-210ENST00000473565 PRAC2D3DTV9 90 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 HIST1H2BKO60814 126 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 IGHG4P01861 327 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 HIST1H2BJP06899 126 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 HIST1H2BOP23527 126 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 HIST1H2BBP33778 126 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 HIST1H2BDP58876 126 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 HIST1H2BCP62807 126 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 RELQ04864 619 aaPredicted RBP4.78□□□□□ -1.64
CLK1-210ENST00000473565 HIST2H2BEQ16778 126 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 TM4SF20Q53R12 229 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.78□□□□□ -1.64
CLK1-210ENST00000473565 KCNIP4Q6PIL6 250 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 NUDT10Q8NFP7 164 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 HIST1H2BHQ93079 126 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 NUDT11Q96G61 164 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 METTL26Q96S19 204 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 HIST1H2BNQ99877 126 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 HIST1H2BMQ99879 126 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 IL36BQ9NZH7 164 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 KLF12Q9Y4X4 402 aa4.78□□□□□ -1.64
CLK1-210ENST00000473565 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.77□□□□□ -1.65
CLK1-210ENST00000473565 DIRC3C9JPN6 131 aa4.77□□□□□ -1.65
CLK1-210ENST00000473565 PPP1R2P9O14990 202 aa4.77□□□□□ -1.65
CLK1-210ENST00000473565 S100A6P06703 90 aa4.77□□□□□ -1.65
CLK1-210ENST00000473565 TRGC1P0CF51 173 aa4.77□□□□□ -1.65
CLK1-210ENST00000473565 CBLN1P23435 193 aa4.77□□□□□ -1.65
CLK1-210ENST00000473565 PSMB8P28062 276 aa4.77□□□□□ -1.65
CLK1-210ENST00000473565 AKR1D1P51857 326 aa4.77□□□□□ -1.65
CLK1-210ENST00000473565 NDUFA6P56556 154 aa4.77□□□□□ -1.65
CLK1-210ENST00000473565 DEFB1P60022 68 aa4.77□□□□□ -1.65
CLK1-210ENST00000473565 C18orf65Q6ZTR6 163 aa4.77□□□□□ -1.65
CLK1-210ENST00000473565 C8orf49Q96NF6 230 aa4.77□□□□□ -1.65
CLK1-210ENST00000473565 GPR82Q96P67 336 aa4.77□□□□□ -1.65
CLK1-210ENST00000473565 IMMP2LQ96T52 175 aa4.77□□□□□ -1.65
CLK1-210ENST00000473565 GAR1Q9NY12 217 aaKnown RBP4.77□□□□□ -1.65
CLK1-210ENST00000473565 NSD1Q96L73 2696 aaPredicted RBP4.77□□□□□ -1.65
CLK1-210ENST00000473565 PHOX2AO14813 284 aa4.77□□□□□ -1.65
CLK1-210ENST00000473565 LTAP01374 205 aa4.77□□□□□ -1.65
CLK1-210ENST00000473565 GZMBP10144 247 aa4.77□□□□□ -1.65
CLK1-210ENST00000473565 SRD5A1P18405 259 aa4.77□□□□□ -1.65
CLK1-210ENST00000473565 FABP9Q0Z7S8 132 aa4.77□□□□□ -1.65
CLK1-210ENST00000473565 SMUG1Q53HV7 270 aa4.77□□□□□ -1.65
CLK1-210ENST00000473565 PDZD11Q5EBL8 140 aa4.77□□□□□ -1.65
CLK1-210ENST00000473565 GFI1BQ5VTD9 330 aa4.77□□□□□ -1.65
CLK1-210ENST00000473565 MRPL54Q6P161 138 aaKnown RBP4.77□□□□□ -1.65
CLK1-210ENST00000473565 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.77□□□□□ -1.65
CLK1-210ENST00000473565 USMG5Q96IX5 58 aa4.77□□□□□ -1.65
CLK1-210ENST00000473565 VGLL1Q99990 258 aa4.77□□□□□ -1.65
CLK1-210ENST00000473565 MLST8Q9BVC4 326 aa4.77□□□□□ -1.65
CLK1-210ENST00000473565 PRSS22Q9GZN4 317 aa4.77□□□□□ -1.65
CLK1-210ENST00000473565 AAMDCQ9H7C9 122 aa4.77□□□□□ -1.65
CLK1-210ENST00000473565 FAM181BA6NEQ2 426 aa4.76□□□□□ -1.65
CLK1-210ENST00000473565 CHEK1O14757 476 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms