RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 E7EUB6 86 aa4.87□□□□□ -1.63
HERC4-209ENST00000473533 H0Y8G0 127 aa4.87□□□□□ -1.63
HERC4-209ENST00000473533 K7EP34 96 aa4.87□□□□□ -1.63
HERC4-209ENST00000473533 CNIH1O95406 144 aa4.87□□□□□ -1.63
HERC4-209ENST00000473533 ARMS2P0C7Q2 107 aa4.87□□□□□ -1.63
HERC4-209ENST00000473533 HLA-DRB4P13762 266 aa4.87□□□□□ -1.63
HERC4-209ENST00000473533 LOXP28300 417 aaPredicted RBP4.87□□□□□ -1.63
HERC4-209ENST00000473533 APOBEC3AP31941 199 aaPredicted RBP4.87□□□□□ -1.63
HERC4-209ENST00000473533 ADIPOQQ15848 244 aa4.87□□□□□ -1.63
HERC4-209ENST00000473533 LINC00322Q6ZN03 302 aaPredicted RBP4.87□□□□□ -1.63
HERC4-209ENST00000473533 RNF125Q96EQ8 232 aa4.87□□□□□ -1.63
HERC4-209ENST00000473533 MAP1LC3AQ9H492 121 aa4.87□□□□□ -1.63
HERC4-209ENST00000473533 HIGD1BQ9P298 99 aa4.87□□□□□ -1.63
HERC4-209ENST00000473533 RALYQ9UKM9 306 aaKnown RBP4.87□□□□□ -1.63
HERC4-209ENST00000473533 FAM215AQ9Y5M1 114 aa4.87□□□□□ -1.63
HERC4-209ENST00000473533 HLA-DRB4X5D2U9 266 aa4.87□□□□□ -1.63
HERC4-209ENST00000473533 A0A087X0K7 114 aa4.86□□□□□ -1.63
HERC4-209ENST00000473533 IGHV1-3A0A0C4DH29 117 aa4.86□□□□□ -1.63
HERC4-209ENST00000473533 I3L2K1 104 aa4.86□□□□□ -1.63
HERC4-209ENST00000473533 TNFRSF13BO14836 293 aaPredicted RBP4.86□□□□□ -1.63
HERC4-209ENST00000473533 IGLV2-11P01706 119 aa4.86□□□□□ -1.63
HERC4-209ENST00000473533 FABP2P12104 132 aa4.86□□□□□ -1.63
HERC4-209ENST00000473533 Q6ZS92 163 aa4.86□□□□□ -1.63
HERC4-209ENST00000473533 OR8A1Q8NGG7 326 aa4.86□□□□□ -1.63
HERC4-209ENST00000473533 IGFBPL1Q8WX77 278 aa4.86□□□□□ -1.63
HERC4-209ENST00000473533 IFI27L1Q96BM0 104 aa4.86□□□□□ -1.63
HERC4-209ENST00000473533 ZC2HC1AQ96GY0 325 aa4.86□□□□□ -1.63
HERC4-209ENST00000473533 SGK494Q96LW2 274 aa4.86□□□□□ -1.63
HERC4-209ENST00000473533 JKAMPQ9P055 326 aa4.86□□□□□ -1.63
HERC4-209ENST00000473533 MRPL36Q9P0J6 103 aaKnown RBP4.86□□□□□ -1.63
HERC4-209ENST00000473533 ADGRG4Q8IZF6 3080 aa4.86□□□□□ -1.63
HERC4-209ENST00000473533 DSCAMO60469 2012 aa4.86□□□□□ -1.63
HERC4-209ENST00000473533 ZNF207O43670 478 aaKnown RBP4.86□□□□□ -1.63
HERC4-209ENST00000473533 ATP5LO75964 103 aa4.86□□□□□ -1.63
HERC4-209ENST00000473533 MFAP4P55083 255 aa4.86□□□□□ -1.63
HERC4-209ENST00000473533 SIGLEC15Q6ZMC9 328 aa4.86□□□□□ -1.63
HERC4-209ENST00000473533 WFDC8Q8IUA0 241 aa4.86□□□□□ -1.63
HERC4-209ENST00000473533 OR2K2Q8NGT1 345 aa4.86□□□□□ -1.63
HERC4-209ENST00000473533 CCL17Q92583 94 aa4.86□□□□□ -1.63
HERC4-209ENST00000473533 DYSFO75923 2080 aa4.86□□□□□ -1.63
HERC4-209ENST00000473533 TEX22C9J3V5 150 aa4.86□□□□□ -1.63
HERC4-209ENST00000473533 M0QZ24 198 aa4.86□□□□□ -1.63
HERC4-209ENST00000473533 SMIM13P0DJ93 91 aa4.86□□□□□ -1.63
HERC4-209ENST00000473533 CKS2P33552 79 aa4.86□□□□□ -1.63
HERC4-209ENST00000473533 LINC00173Q6ZV60 143 aa4.86□□□□□ -1.63
HERC4-209ENST00000473533 CSTL1Q9H114 145 aa4.86□□□□□ -1.63
HERC4-209ENST00000473533 TIMM8BQ9Y5J9 83 aaPredicted RBP4.86□□□□□ -1.63
HERC4-209ENST00000473533 A0A0G2JLM5 398 aa4.85□□□□□ -1.63
HERC4-209ENST00000473533 BUB1B-PAK6H3BSN5 160 aa4.85□□□□□ -1.63
HERC4-209ENST00000473533 GNG7O60262 68 aa4.85□□□□□ -1.63
HERC4-209ENST00000473533 IGHV3-48P01763 117 aa4.85□□□□□ -1.63
HERC4-209ENST00000473533 C2orf91Q6ZV80 131 aa4.85□□□□□ -1.63
HERC4-209ENST00000473533 ZNRD1Q9P1U0 126 aa4.85□□□□□ -1.63
HERC4-209ENST00000473533 TACC2O95359 2948 aa4.85□□□□□ -1.63
HERC4-209ENST00000473533 WI2-2373I1.2A0A1W2PRP0 233 aa4.85□□□□□ -1.63
HERC4-209ENST00000473533 B9A039 149 aa4.85□□□□□ -1.63
HERC4-209ENST00000473533 D6R8Y8 96 aa4.85□□□□□ -1.63
HERC4-209ENST00000473533 IGLV1-47P01700 117 aa4.85□□□□□ -1.63
HERC4-209ENST00000473533 PIP4P1Q86T03 277 aa4.85□□□□□ -1.63
HERC4-209ENST00000473533 EXOC3-AS1Q8N2X6 119 aa4.85□□□□□ -1.63
HERC4-209ENST00000473533 FER1L6-AS1Q8NA97 138 aa4.85□□□□□ -1.63
HERC4-209ENST00000473533 RNASE6Q93091 150 aaKnown RBP4.85□□□□□ -1.63
HERC4-209ENST00000473533 TPPP3Q9BW30 176 aa4.85□□□□□ -1.63
HERC4-209ENST00000473533 SIGLEC8Q9NYZ4 499 aa4.85□□□□□ -1.63
HERC4-209ENST00000473533 SRSF1Q07955 248 aaKnown RBP eCLIP4.85□□□□□ -1.635e-10■■■■□ 24.7
HERC4-209ENST00000473533 FAM27E3Q08E93 113 aa4.85□□□□□ -1.63
HERC4-209ENST00000473533 TAL2Q16559 108 aa4.85□□□□□ -1.63
HERC4-209ENST00000473533 Q6ZVH6 145 aa4.85□□□□□ -1.63
HERC4-209ENST00000473533 TPSG1Q9NRR2 321 aa4.85□□□□□ -1.63
HERC4-209ENST00000473533 SMG1Q96Q15 3661 aaKnown RBP4.85□□□□□ -1.63
HERC4-209ENST00000473533 TRAV8-1A0A0A6YYK1 113 aa4.84□□□□□ -1.63
HERC4-209ENST00000473533 NPIPB5A8MRT5 1133 aa4.84□□□□□ -1.63
HERC4-209ENST00000473533 IL4P05112 153 aa4.84□□□□□ -1.63
HERC4-209ENST00000473533 FTH1P19P0C7X4 201 aa4.84□□□□□ -1.63
HERC4-209ENST00000473533 SCGB1A1P11684 91 aa4.84□□□□□ -1.63
HERC4-209ENST00000473533 IFI27P40305 119 aaPredicted RBP4.84□□□□□ -1.63
HERC4-209ENST00000473533 KIR3DS1Q14943 382 aa4.84□□□□□ -1.63
HERC4-209ENST00000473533 TWIST1Q15672 202 aa4.84□□□□□ -1.63
HERC4-209ENST00000473533 MRGPRG-AS1Q2M3A8 158 aa4.84□□□□□ -1.63
HERC4-209ENST00000473533 CCDC144NLQ6NUI1 221 aa4.84□□□□□ -1.63
HERC4-209ENST00000473533 UFSP1Q6NVU6 142 aa4.84□□□□□ -1.63
HERC4-209ENST00000473533 LYZL1Q6UWQ5 148 aa4.84□□□□□ -1.63
HERC4-209ENST00000473533 ARFGEF3Q5TH69 2177 aa4.84□□□□□ -1.63
HERC4-209ENST00000473533 TRAV8-6A0A0B4J262 113 aa4.84□□□□□ -1.63
HERC4-209ENST00000473533 OOSP1A8MZH6 123 aa4.84□□□□□ -1.63
HERC4-209ENST00000473533 NBR2O15453 112 aa4.84□□□□□ -1.63
HERC4-209ENST00000473533 SH2D1AO60880 128 aa4.84□□□□□ -1.63
HERC4-209ENST00000473533 IGKV1-17P01599 117 aa4.84□□□□□ -1.63
HERC4-209ENST00000473533 FGF6P10767 208 aa4.84□□□□□ -1.63
HERC4-209ENST00000473533 WT1P19544 449 aaPredicted RBP4.84□□□□□ -1.63
HERC4-209ENST00000473533 CACNG7P62955 275 aa4.84□□□□□ -1.63
HERC4-209ENST00000473533 BSPH1Q075Z2 132 aa4.84□□□□□ -1.63
HERC4-209ENST00000473533 ZNF491Q8N8L2 437 aa4.84□□□□□ -1.63
HERC4-209ENST00000473533 WNK2Q9Y3S1 2297 aa4.84□□□□□ -1.63
HERC4-209ENST00000473533 LINC01546A6NGU7 62 aa4.84□□□□□ -1.64
HERC4-209ENST00000473533 FCER1GP30273 86 aa4.84□□□□□ -1.64
HERC4-209ENST00000473533 FCGR2BP31994 310 aaPredicted RBP4.84□□□□□ -1.64
HERC4-209ENST00000473533 ZNF138P52744 262 aa4.84□□□□□ -1.64
HERC4-209ENST00000473533 MEGF9Q9H1U4 602 aa4.84□□□□□ -1.64
HERC4-209ENST00000473533 FBXL15Q9H469 300 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms