RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 Q6ZS92 163 aa11.26□□□□□ -0.61
NHLRC3-204ENST00000473371 FAM57AQ8TBR7 257 aa11.26□□□□□ -0.61
NHLRC3-204ENST00000473371 MAP1BP46821 2468 aaKnown RBP11.25□□□□□ -0.61
NHLRC3-204ENST00000473371 GAGE10A6NGK3 116 aa11.25□□□□□ -0.61
NHLRC3-204ENST00000473371 VSTM5A8MXK1 200 aa11.25□□□□□ -0.61
NHLRC3-204ENST00000473371 H3BRN7 92 aa11.25□□□□□ -0.61
NHLRC3-204ENST00000473371 M0R3E3 92 aa11.25□□□□□ -0.61
NHLRC3-204ENST00000473371 TCTAP57738 103 aa11.25□□□□□ -0.61
NHLRC3-204ENST00000473371 TNFRSF14Q92956 283 aa11.25□□□□□ -0.61
NHLRC3-204ENST00000473371 C8orf49Q96NF6 230 aa11.25□□□□□ -0.61
NHLRC3-204ENST00000473371 SIGLEC8Q9NYZ4 499 aa11.25□□□□□ -0.61
NHLRC3-204ENST00000473371 KAAG1Q9UBP8 84 aa11.25□□□□□ -0.61
NHLRC3-204ENST00000473371 K7ERU9 68 aa11.25□□□□□ -0.61
NHLRC3-204ENST00000473371 CNIH1O95406 144 aa11.25□□□□□ -0.61
NHLRC3-204ENST00000473371 IGFL3Q6UXB1 125 aa11.25□□□□□ -0.61
NHLRC3-204ENST00000473371 RNASE6Q93091 150 aaKnown RBP11.25□□□□□ -0.61
NHLRC3-204ENST00000473371 PRELID3AQ96N28 172 aa11.25□□□□□ -0.61
NHLRC3-204ENST00000473371 A0A096LNJ9 63 aa11.24□□□□□ -0.61
NHLRC3-204ENST00000473371 COX7A1P24310 79 aa11.24□□□□□ -0.61
NHLRC3-204ENST00000473371 LYZL1Q6UWQ5 148 aa11.24□□□□□ -0.61
NHLRC3-204ENST00000473371 PIP4P1Q86T03 277 aa11.24□□□□□ -0.61
NHLRC3-204ENST00000473371 LYPD1Q8N2G4 141 aa11.24□□□□□ -0.61
NHLRC3-204ENST00000473371 TMEM213A2RRL7 107 aa11.24□□□□□ -0.61
NHLRC3-204ENST00000473371 BUB1B-PAK6H3BSN5 160 aa11.24□□□□□ -0.61
NHLRC3-204ENST00000473371 IGLV1-47P01700 117 aa11.24□□□□□ -0.61
NHLRC3-204ENST00000473371 FCGR2BP31994 310 aaPredicted RBP11.24□□□□□ -0.61
NHLRC3-204ENST00000473371 RABAC1Q9UI14 185 aa11.24□□□□□ -0.61
NHLRC3-204ENST00000473371 TMEM189A5PLL7 270 aa11.24□□□□□ -0.61
NHLRC3-204ENST00000473371 IL4P05112 153 aa11.24□□□□□ -0.61
NHLRC3-204ENST00000473371 THBDP07204 575 aa11.24□□□□□ -0.61
NHLRC3-204ENST00000473371 FGF6P10767 208 aa11.24□□□□□ -0.61
NHLRC3-204ENST00000473371 FXYD7P58549 80 aa11.24□□□□□ -0.61
NHLRC3-204ENST00000473371 CACNG7P62955 275 aa11.24□□□□□ -0.61
NHLRC3-204ENST00000473371 ZNF493Q6ZR52 646 aa11.24□□□□□ -0.61
NHLRC3-204ENST00000473371 AMN1Q8IY45 258 aa11.24□□□□□ -0.61
NHLRC3-204ENST00000473371 TMEM190Q8WZ59 177 aa11.24□□□□□ -0.61
NHLRC3-204ENST00000473371 DPF1Q92782 380 aa11.24□□□□□ -0.61
NHLRC3-204ENST00000473371 RPEQ96AT9 228 aa11.24□□□□□ -0.61
NHLRC3-204ENST00000473371 A0A0G2JNJ9 132 aa11.23□□□□□ -0.61
NHLRC3-204ENST00000473371 RNF125Q96EQ8 232 aa11.23□□□□□ -0.61
NHLRC3-204ENST00000473371 ZNF414Q96IQ9 312 aa11.23□□□□□ -0.61
NHLRC3-204ENST00000473371 Q9UFV3 132 aa11.23□□□□□ -0.61
NHLRC3-204ENST00000473371 BOD1L1Q8NFC6 3051 aa11.23□□□□□ -0.61
NHLRC3-204ENST00000473371 A6NDN8 102 aa11.23□□□□□ -0.61
NHLRC3-204ENST00000473371 APOBEC3AP31941 199 aaPredicted RBP11.23□□□□□ -0.61
NHLRC3-204ENST00000473371 LGALS9BQ3B8N2 356 aa11.23□□□□□ -0.61
NHLRC3-204ENST00000473371 LGALS9CQ6DKI2 356 aa11.23□□□□□ -0.61
NHLRC3-204ENST00000473371 ORMDL3Q8N138 153 aa11.23□□□□□ -0.61
NHLRC3-204ENST00000473371 OR1N2Q8NGR9 330 aa11.23□□□□□ -0.61
NHLRC3-204ENST00000473371 K7EIM0 57 aa11.22□□□□□ -0.61
NHLRC3-204ENST00000473371 K7EM74 188 aa11.22□□□□□ -0.61
NHLRC3-204ENST00000473371 FAM104BQ5XKR9 115 aa11.22□□□□□ -0.61
NHLRC3-204ENST00000473371 PIP4P2Q8N4L2 257 aa11.22□□□□□ -0.61
NHLRC3-204ENST00000473371 ZNF491Q8N8L2 437 aa11.22□□□□□ -0.61
NHLRC3-204ENST00000473371 GTF2H5Q6ZYL4 71 aa11.22□□□□□ -0.61
NHLRC3-204ENST00000473371 AAMDCQ9H7C9 122 aa11.22□□□□□ -0.61
NHLRC3-204ENST00000473371 THYN1Q9P016 225 aa11.22□□□□□ -0.61
NHLRC3-204ENST00000473371 SH3BGRL2Q9UJC5 107 aa11.22□□□□□ -0.61
NHLRC3-204ENST00000473371 RALYQ9UKM9 306 aaKnown RBP11.22□□□□□ -0.61
NHLRC3-204ENST00000473371 HILPDAQ9Y5L2 63 aa11.22□□□□□ -0.61
NHLRC3-204ENST00000473371 S4R3C0 116 aa11.22□□□□□ -0.61
NHLRC3-204ENST00000473371 SMG1Q96Q15 3661 aaKnown RBP11.21□□□□□ -0.61
NHLRC3-204ENST00000473371 A1L4Q6 167 aa11.21□□□□□ -0.61
NHLRC3-204ENST00000473371 C9orf118A6NHY6 69 aa11.21□□□□□ -0.61
NHLRC3-204ENST00000473371 H3BRM9 83 aa11.21□□□□□ -0.61
NHLRC3-204ENST00000473371 HBDP02042 147 aa11.21□□□□□ -0.61
NHLRC3-204ENST00000473371 BOD1L2Q8IYS8 172 aa11.21□□□□□ -0.61
NHLRC3-204ENST00000473371 U3KQK5 164 aa11.21□□□□□ -0.61
NHLRC3-204ENST00000473371 CNOT1A5YKK6 2376 aaKnown RBP11.21□□□□□ -0.62
NHLRC3-204ENST00000473371 SMAD7O15105 426 aaKnown RBP11.21□□□□□ -0.62
NHLRC3-204ENST00000473371 SH2D1AO60880 128 aa11.21□□□□□ -0.62
NHLRC3-204ENST00000473371 PCNX1Q96RV3 2341 aa11.21□□□□□ -0.62
NHLRC3-204ENST00000473371 CFAP47Q6ZTR5 3102 aa11.21□□□□□ -0.62
NHLRC3-204ENST00000473371 H3BUT2 72 aa11.2□□□□□ -0.62
NHLRC3-204ENST00000473371 MRPS12O15235 138 aaKnown RBP11.2□□□□□ -0.62
NHLRC3-204ENST00000473371 MRPL51Q4U2R6 128 aaKnown RBP11.2□□□□□ -0.62
NHLRC3-204ENST00000473371 NAA38Q9BRA0 125 aaKnown RBP11.2□□□□□ -0.62
NHLRC3-204ENST00000473371 CUL9Q8IWT3 2517 aa11.2□□□□□ -0.62
NHLRC3-204ENST00000473371 ZGRF1Q86YA3 2104 aa11.2□□□□□ -0.62
NHLRC3-204ENST00000473371 A0A1W2PRD5 423 aa11.2□□□□□ -0.62
NHLRC3-204ENST00000473371 A0A1W2PRF3 423 aa11.2□□□□□ -0.62
NHLRC3-204ENST00000473371 A0A1W2PRM7 423 aa11.2□□□□□ -0.62
NHLRC3-204ENST00000473371 MEGF9Q9H1U4 602 aa11.2□□□□□ -0.62
NHLRC3-204ENST00000473371 SELENOKQ9Y6D0 94 aa11.2□□□□□ -0.62
NHLRC3-204ENST00000473371 BDP1A6H8Y1 2624 aa11.2□□□□□ -0.62
NHLRC3-204ENST00000473371 HSD52Q0P140 79 aa11.2□□□□□ -0.62
NHLRC3-204ENST00000473371 KIR3DS1Q14943 382 aa11.2□□□□□ -0.62
NHLRC3-204ENST00000473371 SMKR1H3BMG3 65 aa11.19□□□□□ -0.62
NHLRC3-204ENST00000473371 PRRG2O14669 202 aa11.19□□□□□ -0.62
NHLRC3-204ENST00000473371 CKS2P33552 79 aa11.19□□□□□ -0.62
NHLRC3-204ENST00000473371 OR9G4Q8NGQ1 327 aa11.19□□□□□ -0.62
NHLRC3-204ENST00000473371 IFI27L1Q96BM0 104 aa11.19□□□□□ -0.62
NHLRC3-204ENST00000473371 JMJD8Q96S16 334 aa11.19□□□□□ -0.62
NHLRC3-204ENST00000473371 EP300Q09472 2414 aaPredicted RBP11.19□□□□□ -0.62
NHLRC3-204ENST00000473371 GNG7O60262 68 aa11.19□□□□□ -0.62
NHLRC3-204ENST00000473371 SAP30O75446 220 aa11.19□□□□□ -0.62
NHLRC3-204ENST00000473371 NMUP48645 174 aa11.19□□□□□ -0.62
NHLRC3-204ENST00000473371 KLF17Q5JT82 389 aaPredicted RBP11.19□□□□□ -0.62
NHLRC3-204ENST00000473371 BCL6BQ8N143 479 aaPredicted RBP11.19□□□□□ -0.62
NHLRC3-204ENST00000473371 SRSF8Q9BRL6 282 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms