RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 IGLC1P0CG04 106 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 RD3LP0DJH9 198 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 GATA2P23769 480 aaPredicted RBP4.9□□□□□ -1.63
HDAC1-205ENST00000472928 RPL29P47914 159 aaKnown RBP4.9□□□□□ -1.63
HDAC1-205ENST00000472928 CDC34P49427 236 aaPredicted RBP4.9□□□□□ -1.63
HDAC1-205ENST00000472928 MFAP4P55083 255 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 ZNF90Q03938 601 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 TIGITQ495A1 244 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 SSX7Q7RTT5 188 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 CENPVQ7Z7K6 275 aaPredicted RBP4.9□□□□□ -1.63
HDAC1-205ENST00000472928 FAM223AQ8IWN6 122 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 NECAP1Q8NC96 275 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 OR10G4Q8NGN3 311 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 OR10G9Q8NGN4 311 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 OR10G7Q8NGN6 311 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 OR10D4PQ8NGN7 298 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 LYPD6BQ8NI32 183 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 VN1R17PQ8TDU5 208 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 EEF1AKMT3Q96AZ1 226 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 TRGV9Q99603 122 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 ASCL2Q99929 193 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 MAP1LC3BQ9GZQ8 125 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 HRH4Q9H3N8 390 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 SMDT1Q9H4I9 107 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 RPRMQ9NS64 109 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 SLC39A9Q9NUM3 307 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 DOK5Q9P104 306 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 ZNF580Q9UK33 172 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 GOLT1BQ9Y3E0 138 aa4.9□□□□□ -1.63
HDAC1-205ENST00000472928 TRBV9A0A0B4J1U6 114 aa4.89□□□□□ -1.63
HDAC1-205ENST00000472928 PPP1R2P9O14990 202 aa4.89□□□□□ -1.63
HDAC1-205ENST00000472928 HMGB3O15347 200 aaKnown RBP4.89□□□□□ -1.63
HDAC1-205ENST00000472928 DLEU1O43261 78 aa4.89□□□□□ -1.63
HDAC1-205ENST00000472928 PAX4O43316 350 aa4.89□□□□□ -1.63
HDAC1-205ENST00000472928 COX7A2P2O60397 106 aa4.89□□□□□ -1.63
HDAC1-205ENST00000472928 IGKV1-17P01599 117 aa4.89□□□□□ -1.63
HDAC1-205ENST00000472928 HBE1P02100 147 aa4.89□□□□□ -1.63
HDAC1-205ENST00000472928 GCSHP23434 173 aa4.89□□□□□ -1.63
HDAC1-205ENST00000472928 GPR183P32249 361 aa4.89□□□□□ -1.63
HDAC1-205ENST00000472928 FGF8P55075 233 aaPredicted RBP4.89□□□□□ -1.63
HDAC1-205ENST00000472928 NDUFA6P56556 154 aa4.89□□□□□ -1.63
HDAC1-205ENST00000472928 LYZP61626 148 aa4.89□□□□□ -1.63
HDAC1-205ENST00000472928 SELENOTP62341 195 aa4.89□□□□□ -1.63
HDAC1-205ENST00000472928 CFHR3Q02985 330 aa4.89□□□□□ -1.63
HDAC1-205ENST00000472928 ATP5G2Q06055 141 aa4.89□□□□□ -1.63
HDAC1-205ENST00000472928 JOSD1Q15040 202 aaPredicted RBP4.89□□□□□ -1.63
HDAC1-205ENST00000472928 USF2Q15853 346 aaPredicted RBP4.89□□□□□ -1.63
HDAC1-205ENST00000472928 ZNF726P1Q15940 193 aa4.89□□□□□ -1.63
HDAC1-205ENST00000472928 KLK9Q2XQG4 91 aa4.89□□□□□ -1.63
HDAC1-205ENST00000472928 LCN15Q6UWW0 184 aa4.89□□□□□ -1.63
HDAC1-205ENST00000472928 LCNL1Q6ZST4 164 aa4.89□□□□□ -1.63
HDAC1-205ENST00000472928 HIST3H2BBQ8N257 126 aa4.89□□□□□ -1.63
HDAC1-205ENST00000472928 RPP25LQ8N5L8 163 aaKnown RBP4.89□□□□□ -1.63
HDAC1-205ENST00000472928 OR5AU1Q8NGC0 362 aa4.89□□□□□ -1.63
HDAC1-205ENST00000472928 ZNF502Q8TBZ5 544 aa4.89□□□□□ -1.63
HDAC1-205ENST00000472928 ACTR3CQ9C0K3 210 aaPredicted RBP4.89□□□□□ -1.63
HDAC1-205ENST00000472928 TMEM231Q9H6L2 316 aa4.89□□□□□ -1.63
HDAC1-205ENST00000472928 KLK9Q9UKQ9 250 aa4.89□□□□□ -1.63
HDAC1-205ENST00000472928 TSSC4Q9Y5U2 329 aaPredicted RBP4.89□□□□□ -1.63
HDAC1-205ENST00000472928 A0A087WWC5 75 aa4.88□□□□□ -1.63
HDAC1-205ENST00000472928 TRBV7-1A0A0A6YYK4 115 aa4.88□□□□□ -1.63
HDAC1-205ENST00000472928 A0A1W2PPV4 95 aa4.88□□□□□ -1.63
HDAC1-205ENST00000472928 PSMB11A5LHX3 300 aa4.88□□□□□ -1.63
HDAC1-205ENST00000472928 M0R143 59 aa4.88□□□□□ -1.63
HDAC1-205ENST00000472928 IGHG4P01861 327 aa4.88□□□□□ -1.63
HDAC1-205ENST00000472928 OR5G3P0C626 314 aa4.88□□□□□ -1.63
HDAC1-205ENST00000472928 PPIFP30405 207 aaKnown RBP4.88□□□□□ -1.63
HDAC1-205ENST00000472928 RHOBP62745 196 aa4.88□□□□□ -1.63
HDAC1-205ENST00000472928 SLC35B1P78383 322 aa4.88□□□□□ -1.63
HDAC1-205ENST00000472928 HAGHQ16775 308 aa4.88□□□□□ -1.63
HDAC1-205ENST00000472928 C10orf113Q5VZT2 155 aa4.88□□□□□ -1.63
HDAC1-205ENST00000472928 SPATA31B1PQ5VZV4 182 aa4.88□□□□□ -1.63
HDAC1-205ENST00000472928 C10orf99Q6UWK7 81 aa4.88□□□□□ -1.63
HDAC1-205ENST00000472928 ZNF329Q86UD4 541 aa4.88□□□□□ -1.63
HDAC1-205ENST00000472928 FAM24BQ8N5W8 94 aa4.88□□□□□ -1.63
HDAC1-205ENST00000472928 OR1L4Q8NGR5 311 aa4.88□□□□□ -1.63
HDAC1-205ENST00000472928 OR1B1Q8NGR6 318 aa4.88□□□□□ -1.63
HDAC1-205ENST00000472928 DPF1Q92782 380 aa4.88□□□□□ -1.63
HDAC1-205ENST00000472928 TXN2Q99757 166 aa4.88□□□□□ -1.63
HDAC1-205ENST00000472928 PBDC1Q9BVG4 233 aa4.88□□□□□ -1.63
HDAC1-205ENST00000472928 GNB4Q9HAV0 340 aa4.88□□□□□ -1.63
HDAC1-205ENST00000472928 DNAH10Q8IVF4 4471 aa4.88□□□□□ -1.63
HDAC1-205ENST00000472928 TRAV30A0A087WSZ9 112 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 C9JQL5 133 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 PPP5D1E7EU14 171 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 HYPMO75409 117 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 OR2C1O95371 312 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 TOMM40O96008 361 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 GCGP01275 180 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 IFNA1P01562 189 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 IGHV3-11P01762 117 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 IL4P05112 153 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 ARL14EPLP0DKL9 152 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 PSG1P11464 419 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 ZNF25P17030 456 aaPredicted RBP4.87□□□□□ -1.63
HDAC1-205ENST00000472928 ORM2P19652 201 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 PSMB8P28062 276 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 FCGR2BP31994 310 aaPredicted RBP4.87□□□□□ -1.63
HDAC1-205ENST00000472928 ARL3P36405 182 aa4.87□□□□□ -1.63
HDAC1-205ENST00000472928 RPS10P46783 165 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms