RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 U3KQE9 123 aa11.23□□□□□ -0.61
HIF3A-206ENST00000472815 A0A087X0K7 114 aa11.23□□□□□ -0.61
HIF3A-206ENST00000472815 CXorf65A6NEN9 183 aa11.23□□□□□ -0.61
HIF3A-206ENST00000472815 ZNF785A8K8V0 405 aa11.23□□□□□ -0.61
HIF3A-206ENST00000472815 INAFM1C9JVW0 142 aa11.23□□□□□ -0.61
HIF3A-206ENST00000472815 K7EMT4 169 aa11.23□□□□□ -0.61
HIF3A-206ENST00000472815 CSN1S1P47710 185 aa11.23□□□□□ -0.61
HIF3A-206ENST00000472815 ARL6IP6Q8N6S5 226 aa11.23□□□□□ -0.61
HIF3A-206ENST00000472815 WFDC12Q8WWY7 111 aa11.23□□□□□ -0.61
HIF3A-206ENST00000472815 OR5B12Q96R08 314 aa11.23□□□□□ -0.61
HIF3A-206ENST00000472815 C16orf95Q9H693 158 aa11.23□□□□□ -0.61
HIF3A-206ENST00000472815 TUBA4BQ9H853 241 aa11.23□□□□□ -0.61
HIF3A-206ENST00000472815 SERTM2A0A1B0GWG4 89 aa11.22□□□□□ -0.61
HIF3A-206ENST00000472815 H3BTX0 84 aa11.22□□□□□ -0.61
HIF3A-206ENST00000472815 DNASE2O00115 360 aaPredicted RBP11.22□□□□□ -0.61
HIF3A-206ENST00000472815 CDX1P47902 265 aaPredicted RBP11.22□□□□□ -0.61
HIF3A-206ENST00000472815 TMEM88Q6PEY1 159 aa11.22□□□□□ -0.61
HIF3A-206ENST00000472815 SIGLEC15Q6ZMC9 328 aa11.22□□□□□ -0.61
HIF3A-206ENST00000472815 LINC01551Q86U37 167 aa11.22□□□□□ -0.61
HIF3A-206ENST00000472815 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.22□□□□□ -0.61
HIF3A-206ENST00000472815 ANAPC16Q96DE5 110 aa11.22□□□□□ -0.61
HIF3A-206ENST00000472815 FMC1Q96HJ9 113 aa11.22□□□□□ -0.61
HIF3A-206ENST00000472815 SLC50A1Q9BRV3 221 aa11.22□□□□□ -0.61
HIF3A-206ENST00000472815 TEP1Q99973 2627 aaKnown RBP11.22□□□□□ -0.61
HIF3A-206ENST00000472815 TSPAN4O14817 238 aa11.21□□□□□ -0.61
HIF3A-206ENST00000472815 PPP1R2P9O14990 202 aa11.21□□□□□ -0.61
HIF3A-206ENST00000472815 ZNF207O43670 478 aaKnown RBP11.21□□□□□ -0.61
HIF3A-206ENST00000472815 TCRAP04437 139 aa11.21□□□□□ -0.61
HIF3A-206ENST00000472815 CENPWQ5EE01 88 aa11.21□□□□□ -0.61
HIF3A-206ENST00000472815 CBLN2Q8IUK8 224 aa11.21□□□□□ -0.61
HIF3A-206ENST00000472815 SMIM12Q96EX1 92 aa11.21□□□□□ -0.61
HIF3A-206ENST00000472815 CLEC5AQ9NY25 188 aa11.21□□□□□ -0.61
HIF3A-206ENST00000472815 FN1P02751 2386 aaKnown RBP11.21□□□□□ -0.62
HIF3A-206ENST00000472815 TMEM183BQ1AE95 376 aa11.21□□□□□ -0.62
HIF3A-206ENST00000472815 C16orf54Q6UWD8 224 aa11.21□□□□□ -0.62
HIF3A-206ENST00000472815 UNQ9165/PRO28630Q6UXU0 137 aa11.21□□□□□ -0.62
HIF3A-206ENST00000472815 C4orf3Q8WVX3 66 aa11.21□□□□□ -0.62
HIF3A-206ENST00000472815 RPH3ALQ9UNE2 315 aa11.21□□□□□ -0.62
HIF3A-206ENST00000472815 IGHV7-4-1A0A0J9YVY3 117 aa11.2□□□□□ -0.62
HIF3A-206ENST00000472815 TCF21O43680 179 aa11.2□□□□□ -0.62
HIF3A-206ENST00000472815 CRLF1O75462 422 aa11.2□□□□□ -0.62
HIF3A-206ENST00000472815 RNF212Q495C1 297 aa11.2□□□□□ -0.62
HIF3A-206ENST00000472815 KHDC1LQ5JSQ8 128 aa11.2□□□□□ -0.62
HIF3A-206ENST00000472815 EXOC3-AS1Q8N2X6 119 aa11.2□□□□□ -0.62
HIF3A-206ENST00000472815 C15orf54Q8N8G6 183 aa11.2□□□□□ -0.62
HIF3A-206ENST00000472815 KLF12Q9Y4X4 402 aa11.2□□□□□ -0.62
HIF3A-206ENST00000472815 TRBV20OR9-2A0A075B6H5 130 aa11.19□□□□□ -0.62
HIF3A-206ENST00000472815 FBLL1A6NHQ2 334 aaKnown RBP11.19□□□□□ -0.62
HIF3A-206ENST00000472815 LGALS9O00182 355 aa11.19□□□□□ -0.62
HIF3A-206ENST00000472815 NDUFA7O95182 113 aa11.19□□□□□ -0.62
HIF3A-206ENST00000472815 GNG5P63218 68 aa11.19□□□□□ -0.62
HIF3A-206ENST00000472815 REC114Q7Z4M0 266 aa11.19□□□□□ -0.62
HIF3A-206ENST00000472815 ISOC2Q96AB3 205 aa11.19□□□□□ -0.62
HIF3A-206ENST00000472815 C17orf77Q96MU5 243 aa11.19□□□□□ -0.62
HIF3A-206ENST00000472815 BIN3Q9NQY0 253 aa11.19□□□□□ -0.62
HIF3A-206ENST00000472815 IGHV3-66A0A0C4DH42 116 aa11.18□□□□□ -0.62
HIF3A-206ENST00000472815 H7BYZ3 331 aa11.18□□□□□ -0.62
HIF3A-206ENST00000472815 SLC17A3O00476 420 aa11.18□□□□□ -0.62
HIF3A-206ENST00000472815 SAMD13Q5VXD3 122 aa11.18□□□□□ -0.62
HIF3A-206ENST00000472815 BAGE2Q86Y30 109 aa11.18□□□□□ -0.62
HIF3A-206ENST00000472815 OCC1Q8TAD7 63 aa11.18□□□□□ -0.62
HIF3A-206ENST00000472815 GLMPQ8WWB7 406 aa11.18□□□□□ -0.62
HIF3A-206ENST00000472815 DPF1Q92782 380 aa11.18□□□□□ -0.62
HIF3A-206ENST00000472815 SFRP2Q96HF1 295 aa11.18□□□□□ -0.62
HIF3A-206ENST00000472815 SMAD5-AS1Q9Y6J3 95 aa11.18□□□□□ -0.62
HIF3A-206ENST00000472815 IGHV3OR16-13A0A075B7E8 117 aa11.18□□□□□ -0.62
HIF3A-206ENST00000472815 IGHV3-49A0A0A0MS15 119 aa11.18□□□□□ -0.62
HIF3A-206ENST00000472815 IGHV3-74A0A0B4J1X5 117 aa11.18□□□□□ -0.62
HIF3A-206ENST00000472815 APOHP02749 345 aaPredicted RBP11.18□□□□□ -0.62
HIF3A-206ENST00000472815 S100PP25815 95 aa11.18□□□□□ -0.62
HIF3A-206ENST00000472815 C1QL4Q86Z23 238 aa11.18□□□□□ -0.62
HIF3A-206ENST00000472815 TMEM75Q8N9X5 138 aa11.18□□□□□ -0.62
HIF3A-206ENST00000472815 IGF2BP2-AS1Q96M15 143 aa11.18□□□□□ -0.62
HIF3A-206ENST00000472815 ZNF331Q9NQX6 463 aaPredicted RBP11.18□□□□□ -0.62
HIF3A-206ENST00000472815 NIPBLQ6KC79 2804 aaeCLIP11.18□□□□□ -0.62
HIF3A-206ENST00000472815 A8MWP6 167 aa11.17□□□□□ -0.62
HIF3A-206ENST00000472815 LINC01619G3V211 115 aa11.17□□□□□ -0.62
HIF3A-206ENST00000472815 ISLRO14498 428 aa11.17□□□□□ -0.62
HIF3A-206ENST00000472815 HOXD3P31249 432 aaPredicted RBP11.17□□□□□ -0.62
HIF3A-206ENST00000472815 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.17□□□□□ -0.62
HIF3A-206ENST00000472815 GOLT1AQ6ZVE7 132 aa11.17□□□□□ -0.62
HIF3A-206ENST00000472815 LINC01006Q8NI28 216 aa11.17□□□□□ -0.62
HIF3A-206ENST00000472815 RHPN1-AS1Q9BWJ2 59 aa11.17□□□□□ -0.62
HIF3A-206ENST00000472815 SMPXQ9UHP9 88 aa11.17□□□□□ -0.62
HIF3A-206ENST00000472815 IGHV4OR15-8A0A075B7B6 117 aa11.16□□□□□ -0.62
HIF3A-206ENST00000472815 A0A087WW49 117 aa11.16□□□□□ -0.62
HIF3A-206ENST00000472815 TRBV6-1A0A0K0K1D8 114 aa11.16□□□□□ -0.62
HIF3A-206ENST00000472815 PGPEP1LA6NFU8 196 aa11.16□□□□□ -0.62
HIF3A-206ENST00000472815 DIRC3C9JPN6 131 aa11.16□□□□□ -0.62
HIF3A-206ENST00000472815 M0QZ24 198 aa11.16□□□□□ -0.62
HIF3A-206ENST00000472815 MGST1P10620 155 aaKnown RBP11.16□□□□□ -0.62
HIF3A-206ENST00000472815 TM4SF20Q53R12 229 aa11.16□□□□□ -0.62
HIF3A-206ENST00000472815 KLHL30-AS1Q8NEE0 82 aa11.16□□□□□ -0.62
HIF3A-206ENST00000472815 MRPL53Q96EL3 112 aaKnown RBP11.16□□□□□ -0.62
HIF3A-206ENST00000472815 TRAV34A0A0B4J273 112 aa11.15□□□□□ -0.62
HIF3A-206ENST00000472815 CHEK1O14757 476 aa11.15□□□□□ -0.62
HIF3A-206ENST00000472815 ERVFC1-1P60608 527 aa11.15□□□□□ -0.62
HIF3A-206ENST00000472815 KCNIP4Q6PIL6 250 aa11.15□□□□□ -0.62
HIF3A-206ENST00000472815 OR10G8Q8NGN5 311 aa11.15□□□□□ -0.62
HIF3A-206ENST00000472815 LINC00479Q96M42 142 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms