RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 HIST1H2BJP06899 126 aa0.91□□□□□ -2.26
PRPF40A-208ENST00000472760 GNG3P63215 75 aa0.91□□□□□ -2.26
PRPF40A-208ENST00000472760 MSMO1Q15800 293 aa0.91□□□□□ -2.26
PRPF40A-208ENST00000472760 KRTAP5-10Q6L8G5 202 aa0.91□□□□□ -2.26
PRPF40A-208ENST00000472760 TMEM14EPQ6UXP3 125 aa0.91□□□□□ -2.26
PRPF40A-208ENST00000472760 OR10AG1Q8NH19 301 aa0.91□□□□□ -2.26
PRPF40A-208ENST00000472760 ZC2HC1AQ96GY0 325 aa0.91□□□□□ -2.26
PRPF40A-208ENST00000472760 WFDC10AQ9H1F0 79 aa0.91□□□□□ -2.26
PRPF40A-208ENST00000472760 MYH10P35580 1976 aa0.9□□□□□ -2.26
PRPF40A-208ENST00000472760 MFSD11O43934 449 aa0.9□□□□□ -2.27
PRPF40A-208ENST00000472760 PPYP01298 95 aa0.9□□□□□ -2.27
PRPF40A-208ENST00000472760 IGLV3-1P01715 115 aa0.9□□□□□ -2.27
PRPF40A-208ENST00000472760 LINC00575Q6W349 94 aa0.9□□□□□ -2.27
PRPF40A-208ENST00000472760 CROCCP2Q86T23 111 aa0.9□□□□□ -2.27
PRPF40A-208ENST00000472760 SMIM20Q8N5G0 67 aa0.9□□□□□ -2.27
PRPF40A-208ENST00000472760 RFX7Q2KHR2 1363 aa0.9□□□□□ -2.27
PRPF40A-208ENST00000472760 CAMSAP2Q08AD1 1489 aa0.9□□□□□ -2.27
PRPF40A-208ENST00000472760 KIAA1549Q9HCM3 1950 aa0.89□□□□□ -2.27
PRPF40A-208ENST00000472760 JMJD7-PLA2G4BH0Y9G9 81 aa0.89□□□□□ -2.27
PRPF40A-208ENST00000472760 LYRM1O43325 122 aa0.89□□□□□ -2.27
PRPF40A-208ENST00000472760 TAS2R41P59536 307 aa0.89□□□□□ -2.27
PRPF40A-208ENST00000472760 EIF3IQ13347 325 aaKnown RBP0.89□□□□□ -2.27
PRPF40A-208ENST00000472760 C1orf140Q5VVS0 124 aa0.89□□□□□ -2.27
PRPF40A-208ENST00000472760 LYG2Q86SG7 212 aa0.89□□□□□ -2.27
PRPF40A-208ENST00000472760 NUP35Q8NFH5 326 aa0.89□□□□□ -2.27
PRPF40A-208ENST00000472760 NUP98P52948 1817 aa0.89□□□□□ -2.27
PRPF40A-208ENST00000472760 CD109Q6YHK3 1445 aa0.89□□□□□ -2.27
PRPF40A-208ENST00000472760 GPR31O00270 319 aa0.88□□□□□ -2.27
PRPF40A-208ENST00000472760 CSN2P05814 226 aa0.88□□□□□ -2.27
PRPF40A-208ENST00000472760 TCTAP57738 103 aa0.88□□□□□ -2.27
PRPF40A-208ENST00000472760 CIRBPQ14011 172 aaKnown RBP0.88□□□□□ -2.27
PRPF40A-208ENST00000472760 ASB4Q9Y574 426 aa0.88□□□□□ -2.27
PRPF40A-208ENST00000472760 FBN2P35556 2912 aa0.88□□□□□ -2.27
PRPF40A-208ENST00000472760 C9orf170A2RU37 121 aa0.87□□□□□ -2.27
PRPF40A-208ENST00000472760 C5orf67F2Z3F1 127 aa0.87□□□□□ -2.27
PRPF40A-208ENST00000472760 HBBP68871 147 aa0.87□□□□□ -2.27
PRPF40A-208ENST00000472760 SPATA45Q537H7 98 aa0.87□□□□□ -2.27
PRPF40A-208ENST00000472760 FKBP1CQ5VVH2 108 aa0.87□□□□□ -2.27
PRPF40A-208ENST00000472760 NEK7Q8TDX7 302 aa0.87□□□□□ -2.27
PRPF40A-208ENST00000472760 RTL8AQ9BWD3 113 aa0.87□□□□□ -2.27
PRPF40A-208ENST00000472760 TCEAL2Q9H3H9 227 aaPredicted RBP0.87□□□□□ -2.27
PRPF40A-208ENST00000472760 HSPB8Q9UJY1 196 aa0.87□□□□□ -2.27
PRPF40A-208ENST00000472760 UFC1Q9Y3C8 167 aa0.87□□□□□ -2.27
PRPF40A-208ENST00000472760 AHNAK2Q8IVF2 5795 aa0.87□□□□□ -2.27
PRPF40A-208ENST00000472760 ZNF469Q96JG9 3925 aaPredicted RBP0.86□□□□□ -2.27
PRPF40A-208ENST00000472760 TRAV23DV6A0A075B6W5 121 aa0.86□□□□□ -2.27
PRPF40A-208ENST00000472760 A0A096LPI6 279 aa0.86□□□□□ -2.27
PRPF40A-208ENST00000472760 CST7O76096 145 aa0.86□□□□□ -2.27
PRPF40A-208ENST00000472760 IDO1P14902 403 aa0.86□□□□□ -2.27
PRPF40A-208ENST00000472760 RTL8BQ17RB0 113 aa0.86□□□□□ -2.27
PRPF40A-208ENST00000472760 STX19Q8N4C7 294 aa0.86□□□□□ -2.27
PRPF40A-208ENST00000472760 PLEKHB2Q96CS7 222 aa0.86□□□□□ -2.27
PRPF40A-208ENST00000472760 OR2H1Q9GZK4 316 aa0.86□□□□□ -2.27
PRPF40A-208ENST00000472760 MGAMO43451 1857 aa0.86□□□□□ -2.27
PRPF40A-208ENST00000472760 TRPM1Q7Z4N2 1603 aa0.86□□□□□ -2.27
PRPF40A-208ENST00000472760 EML5Q05BV3 1969 aa0.85□□□□□ -2.27
PRPF40A-208ENST00000472760 GLRXP35754 106 aa0.85□□□□□ -2.27
PRPF40A-208ENST00000472760 RPL35P42766 123 aaKnown RBP0.85□□□□□ -2.27
PRPF40A-208ENST00000472760 LTC4SQ16873 150 aa0.85□□□□□ -2.27
PRPF40A-208ENST00000472760 CNTRLQ7Z7A1 2325 aa0.85□□□□□ -2.27
PRPF40A-208ENST00000472760 FAM216BQ8N7L0 139 aa0.85□□□□□ -2.27
PRPF40A-208ENST00000472760 OR10AC1Q8NH08 325 aa0.85□□□□□ -2.27
PRPF40A-208ENST00000472760 HOPXQ9BPY8 73 aaPredicted RBP0.85□□□□□ -2.27
PRPF40A-208ENST00000472760 BIN3Q9NQY0 253 aa0.85□□□□□ -2.27
PRPF40A-208ENST00000472760 GID8Q9NWU2 228 aa0.85□□□□□ -2.27
PRPF40A-208ENST00000472760 RNF11Q9Y3C5 154 aa0.85□□□□□ -2.27
PRPF40A-208ENST00000472760 ALPK3Q96L96 1907 aa0.85□□□□□ -2.27
PRPF40A-208ENST00000472760 NISCHQ9Y2I1 1504 aa0.84□□□□□ -2.27
PRPF40A-208ENST00000472760 TMEM238C9JI98 176 aa0.84□□□□□ -2.27
PRPF40A-208ENST00000472760 PIAS1O75925 651 aa0.84□□□□□ -2.27
PRPF40A-208ENST00000472760 PHF5AQ7RTV0 110 aaKnown RBP0.84□□□□□ -2.27
PRPF40A-208ENST00000472760 FAM24BQ8N5W8 94 aa0.84□□□□□ -2.27
PRPF40A-208ENST00000472760 MED11Q9P086 117 aa0.84□□□□□ -2.27
PRPF40A-208ENST00000472760 LAMTOR3Q9UHA4 124 aa0.84□□□□□ -2.27
PRPF40A-208ENST00000472760 PHRF1Q9P1Y6 1649 aaKnown RBP0.84□□□□□ -2.28
PRPF40A-208ENST00000472760 DOCK4Q8N1I0 1966 aa0.84□□□□□ -2.28
PRPF40A-208ENST00000472760 MYO5AQ9Y4I1 1855 aaKnown RBP0.84□□□□□ -2.28
PRPF40A-208ENST00000472760 UBR2Q8IWV8 1755 aa0.83□□□□□ -2.28
PRPF40A-208ENST00000472760 H3BQV1 296 aa0.83□□□□□ -2.28
PRPF40A-208ENST00000472760 MT-ND6P03923 174 aa0.83□□□□□ -2.28
PRPF40A-208ENST00000472760 SERPINB1P30740 379 aa0.83□□□□□ -2.28
PRPF40A-208ENST00000472760 C3orf33Q6P1S2 294 aa0.83□□□□□ -2.28
PRPF40A-208ENST00000472760 DYDC1Q8WWB3 177 aa0.83□□□□□ -2.28
PRPF40A-208ENST00000472760 PRRT1Q99946 306 aa0.83□□□□□ -2.28
PRPF40A-208ENST00000472760 PLXNA4Q9HCM2 1894 aa0.82□□□□□ -2.28
PRPF40A-208ENST00000472760 E5RI56 91 aa0.82□□□□□ -2.28
PRPF40A-208ENST00000472760 VMA21Q3ZAQ7 101 aa0.82□□□□□ -2.28
PRPF40A-208ENST00000472760 KRTAP19-3Q7Z4W3 81 aa0.82□□□□□ -2.28
PRPF40A-208ENST00000472760 BORCS8Q96FH0 119 aa0.82□□□□□ -2.28
PRPF40A-208ENST00000472760 CASP8AP2Q9UKL3 1982 aa0.82□□□□□ -2.28
PRPF40A-208ENST00000472760 FRMPD1Q5SYB0 1578 aa0.82□□□□□ -2.28
PRPF40A-208ENST00000472760 ERBINQ96RT1 1412 aa0.81□□□□□ -2.28
PRPF40A-208ENST00000472760 COL24A1Q17RW2 1714 aa0.81□□□□□ -2.28
PRPF40A-208ENST00000472760 SIP14410 1827 aa0.81□□□□□ -2.28
PRPF40A-208ENST00000472760 G0S2P27469 103 aa0.81□□□□□ -2.28
PRPF40A-208ENST00000472760 TRIQKQ629K1 86 aa0.81□□□□□ -2.28
PRPF40A-208ENST00000472760 GLIPR1L1Q6UWM5 242 aa0.81□□□□□ -2.28
PRPF40A-208ENST00000472760 CST11Q9H112 138 aa0.81□□□□□ -2.28
PRPF40A-208ENST00000472760 BOLA2Q9H3K6 86 aa0.81□□□□□ -2.28
PRPF40A-208ENST00000472760 TPRKBQ9Y3C4 175 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms