RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 NBDYA0A0U1RRE5 68 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 DUXBA0A1W2PPF3 345 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 FAM25AB3EWG3 89 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 FAM25CB3EWG5 89 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 FAM25GB3EWG6 89 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 K7EP13 123 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 MED6O75586 246 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 IGKV1-39P01597 117 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 IGKV1D-39P04432 117 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 P0C879 139 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 HTN3P15516 51 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 FAUP35544 74 aaKnown RBP2.47□□□□□ -2.01
XRN1-209ENST00000472625 CCR6P51684 374 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 USF2Q15853 346 aaPredicted RBP2.47□□□□□ -2.01
XRN1-209ENST00000472625 ZNF79Q15937 498 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 SCGB2B2Q4G0G5 96 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 SPINK9Q5DT21 86 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 NMSQ5H8A3 153 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 STEAP1BQ6NZ63 245 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 ZNF493Q6ZR52 646 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 LHFPL1Q86WI0 220 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 SNX29P2Q8IUI4 249 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 LGI3Q8N145 548 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 ZNF709Q8N972 641 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 BPIFCQ8NFQ6 507 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 OR4B1Q8NGF8 309 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 OR4D5Q8NGN0 318 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 OR1B1Q8NGR6 318 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 DTD1Q8TEA8 209 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 IGF2BP2-AS1Q96M15 143 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 LINC00052Q96N35 136 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 TP53RKQ96S44 253 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 C20orf144Q9BQM9 153 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 TMEM147Q9BVK8 224 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 FNDC4Q9H6D8 234 aaPredicted RBP2.47□□□□□ -2.01
XRN1-209ENST00000472625 NAA60Q9H7X0 242 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 PPP1R14DQ9NXH3 145 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 COMMD3Q9UBI1 195 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 MTFP1Q9UDX5 166 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 CACNG5Q9UF02 275 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 SHPKQ9UHJ6 478 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 SCP2D1Q9UJQ7 156 aa2.47□□□□□ -2.01
XRN1-209ENST00000472625 YTHDF2Q9Y5A9 579 aaKnown RBP2.47□□□□□ -2.01
XRN1-209ENST00000472625 IGLV5-37A0A075B6J1 123 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 A0A0J9YX75 114 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 CRYM-AS1A6NIL9 109 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 H3BNG1 76 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 BOLA2-SMG1P6H3BVE0 249 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 H7BYZ3 331 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 RAB3DO95716 219 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 CD3DP04234 171 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 PRSS2P07478 247 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 OR5AC1P0C628 307 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 RPL7P18124 248 aaKnown RBP2.46□□□□□ -2.02
XRN1-209ENST00000472625 CXCL2P19875 107 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 TAS2R60P59551 318 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 AP3S2P59780 193 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 LYZP61626 148 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 SELENOTP62341 195 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 GAMTQ14353 236 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 SMCO1Q147U7 214 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 FAM78BQ5VT40 261 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 ZNF767PQ75MW2 155 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 NFE4Q86UQ8 179 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 TMEM229BQ8NBD8 167 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 OR13C8Q8NGS7 320 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 OR1S1Q8NH92 325 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 TMEM263Q8WUH6 116 aaKnown RBP2.46□□□□□ -2.02
XRN1-209ENST00000472625 DEDD2Q8WXF8 326 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 GPR146Q96CH1 333 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 TRGV9Q99603 122 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 UPK3BQ9BT76 320 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 Q9H3A6 140 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 TIMM8BQ9Y5J9 83 aaPredicted RBP2.46□□□□□ -2.02
XRN1-209ENST00000472625 TMEM56-RWDD3S4R434 201 aa2.46□□□□□ -2.02
XRN1-209ENST00000472625 A8MTW9 85 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 SNURFLB1AK76 121 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 F5H768 121 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 SOCS3O14543 225 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 ATP6V1G2O95670 118 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 RLN2P04090 185 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 AKAIN1P0CW23 69 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 DEFB130BP0DP73 79 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 DEFB130AP0DP74 79 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 SLC25A6P12236 298 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 ELK1P19419 428 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 M6PRP20645 277 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 CDKN1BP46527 198 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 CNN1P51911 297 aaKnown RBP2.45□□□□□ -2.02
XRN1-209ENST00000472625 AKR1C1Q04828 323 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 SP6Q3SY56 376 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 SERTAD4-AS1Q5TG53 156 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 LCN15Q6UWW0 184 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 TMEM144Q7Z5S9 345 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 CCDC190Q86UF4 302 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 ZNF738Q8NE65 137 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 ZNF680Q8NEM1 530 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 OR51S1Q8NGJ8 323 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 ZNRF2Q8NHG8 242 aa2.45□□□□□ -2.02
XRN1-209ENST00000472625 LRRC20Q8TCA0 184 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms