RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 RPP25LQ8N5L8 163 aaKnown RBP10.47□□□□□ -0.73
SSR4-207ENST00000471724 PAXXQ9BUH6 204 aa10.47□□□□□ -0.73
SSR4-207ENST00000471724 OR51M1Q9H341 326 aa10.47□□□□□ -0.73
SSR4-207ENST00000471724 RPRMQ9NS64 109 aa10.47□□□□□ -0.73
SSR4-207ENST00000471724 UBQLN2Q9UHD9 624 aa10.47□□□□□ -0.73
SSR4-207ENST00000471724 CTXND1A0A1B0GTU2 59 aa10.46□□□□□ -0.73
SSR4-207ENST00000471724 ZNF253O75346 499 aa10.46□□□□□ -0.73
SSR4-207ENST00000471724 DEFB131AP59861 70 aa10.46□□□□□ -0.73
SSR4-207ENST00000471724 PSMG4Q5JS54 123 aa10.46□□□□□ -0.73
SSR4-207ENST00000471724 DPPA3Q6W0C5 159 aa10.46□□□□□ -0.73
SSR4-207ENST00000471724 TMED6Q8WW62 240 aa10.46□□□□□ -0.73
SSR4-207ENST00000471724 RAB24Q969Q5 203 aa10.46□□□□□ -0.73
SSR4-207ENST00000471724 C19orf73Q9NVV2 129 aa10.46□□□□□ -0.73
SSR4-207ENST00000471724 CLEC5AQ9NY25 188 aa10.46□□□□□ -0.73
SSR4-207ENST00000471724 A8MZ25 164 aa10.45□□□□□ -0.74
SSR4-207ENST00000471724 STAG3L2P0CL84 134 aa10.45□□□□□ -0.74
SSR4-207ENST00000471724 STAG3L3P0CL85 134 aa10.45□□□□□ -0.74
SSR4-207ENST00000471724 PYYP10082 97 aa10.45□□□□□ -0.74
SSR4-207ENST00000471724 FAM24BQ8N5W8 94 aa10.45□□□□□ -0.74
SSR4-207ENST00000471724 PHYHIPLQ96FC7 376 aa10.45□□□□□ -0.74
SSR4-207ENST00000471724 WFDC10AQ9H1F0 79 aa10.45□□□□□ -0.74
SSR4-207ENST00000471724 TUBA4BQ9H853 241 aa10.45□□□□□ -0.74
SSR4-207ENST00000471724 SRD5A3Q9H8P0 318 aa10.45□□□□□ -0.74
SSR4-207ENST00000471724 ZNF331Q9NQX6 463 aaPredicted RBP10.45□□□□□ -0.74
SSR4-207ENST00000471724 TRBV19A0A075B6N1 114 aa10.44□□□□□ -0.74
SSR4-207ENST00000471724 H3BQ15 152 aa10.44□□□□□ -0.74
SSR4-207ENST00000471724 CXorf1O96002 111 aa10.44□□□□□ -0.74
SSR4-207ENST00000471724 OR10J4P0C629 311 aa10.44□□□□□ -0.74
SSR4-207ENST00000471724 ARL14EPLP0DKL9 152 aa10.44□□□□□ -0.74
SSR4-207ENST00000471724 IGHV4-30-4P0DP06 118 aa10.44□□□□□ -0.74
SSR4-207ENST00000471724 RAB5CP51148 216 aa10.44□□□□□ -0.74
SSR4-207ENST00000471724 PSG9Q00887 426 aa10.44□□□□□ -0.74
SSR4-207ENST00000471724 RNF141Q8WVD5 230 aa10.44□□□□□ -0.74
SSR4-207ENST00000471724 FXYD5Q96DB9 178 aa10.44□□□□□ -0.74
SSR4-207ENST00000471724 C17orf77Q96MU5 243 aa10.44□□□□□ -0.74
SSR4-207ENST00000471724 ZNF586Q9NXT0 402 aa10.44□□□□□ -0.74
SSR4-207ENST00000471724 BOLA2-SMG1P6H3BVE0 249 aa10.43□□□□□ -0.74
SSR4-207ENST00000471724 SLC17A3O00476 420 aa10.43□□□□□ -0.74
SSR4-207ENST00000471724 NBEAP1P0C6P0 100 aa10.43□□□□□ -0.74
SSR4-207ENST00000471724 DEFB125Q8N687 156 aa10.43□□□□□ -0.74
SSR4-207ENST00000471724 FAM213BQ8TBF2 198 aa10.43□□□□□ -0.74
SSR4-207ENST00000471724 LINC00052Q96N35 136 aa10.43□□□□□ -0.74
SSR4-207ENST00000471724 AAMDCQ9H7C9 122 aa10.43□□□□□ -0.74
SSR4-207ENST00000471724 TMEM167BQ9NRX6 74 aa10.43□□□□□ -0.74
SSR4-207ENST00000471724 MAP1LC3B2A6NCE7 125 aa10.42□□□□□ -0.74
SSR4-207ENST00000471724 HMGB3O15347 200 aaKnown RBP10.42□□□□□ -0.74
SSR4-207ENST00000471724 DEFB121Q5J5C9 76 aa10.42□□□□□ -0.74
SSR4-207ENST00000471724 FOXI2Q6ZQN5 318 aa10.42□□□□□ -0.74
SSR4-207ENST00000471724 APRG1Q8IVJ8 170 aa10.42□□□□□ -0.74
SSR4-207ENST00000471724 ZNF738Q8NE65 137 aa10.42□□□□□ -0.74
SSR4-207ENST00000471724 BLNKQ8WV28 456 aa10.42□□□□□ -0.74
SSR4-207ENST00000471724 SAT2Q96F10 170 aaPredicted RBP10.42□□□□□ -0.74
SSR4-207ENST00000471724 ZNF503Q96F45 646 aa10.42□□□□□ -0.74
SSR4-207ENST00000471724 MAP1LC3BQ9GZQ8 125 aa10.42□□□□□ -0.74
SSR4-207ENST00000471724 PRELID1Q9Y255 219 aa10.42□□□□□ -0.74
SSR4-207ENST00000471724 PRKDCP78527 4128 aaKnown RBP10.42□□□□□ -0.74
SSR4-207ENST00000471724 TRAV8-2A0A0B4J237 113 aa10.41□□□□□ -0.74
SSR4-207ENST00000471724 H3BTX0 84 aa10.41□□□□□ -0.74
SSR4-207ENST00000471724 SNRPCP09234 159 aaKnown RBP10.41□□□□□ -0.74
SSR4-207ENST00000471724 GCHFRP30047 84 aa10.41□□□□□ -0.74
SSR4-207ENST00000471724 SULT1A2P50226 295 aa10.41□□□□□ -0.74
SSR4-207ENST00000471724 ZNF726P1Q15940 193 aa10.41□□□□□ -0.74
SSR4-207ENST00000471724 PSG3Q16557 428 aa10.41□□□□□ -0.74
SSR4-207ENST00000471724 EBLN2Q6P2I7 272 aa10.41□□□□□ -0.74
SSR4-207ENST00000471724 STHQ8IWL8 128 aa10.41□□□□□ -0.74
SSR4-207ENST00000471724 LYPD1Q8N2G4 141 aa10.41□□□□□ -0.74
SSR4-207ENST00000471724 RNF182Q8N6D2 247 aa10.41□□□□□ -0.74
SSR4-207ENST00000471724 MRPL53Q96EL3 112 aaKnown RBP10.41□□□□□ -0.74
SSR4-207ENST00000471724 DNAH3Q8TD57 4116 aa10.41□□□□□ -0.74
SSR4-207ENST00000471724 LOC102724200A0A096LPH7 203 aaPredicted RBP10.4□□□□□ -0.74
SSR4-207ENST00000471724 TEX46H3BTG2 121 aa10.4□□□□□ -0.74
SSR4-207ENST00000471724 EIF3GO75821 320 aaKnown RBP eCLIP10.4□□□□□ -0.74
SSR4-207ENST00000471724 NDUFB4O95168 129 aa10.4□□□□□ -0.74
SSR4-207ENST00000471724 FRMD6-AS1P0C7T7 363 aa10.4□□□□□ -0.74
SSR4-207ENST00000471724 HLA-DRB4P13762 266 aa10.4□□□□□ -0.74
SSR4-207ENST00000471724 FAM74A1Q5RGS3 127 aa10.4□□□□□ -0.74
SSR4-207ENST00000471724 SSX7Q7RTT5 188 aa10.4□□□□□ -0.74
SSR4-207ENST00000471724 IQCF2Q8IXL9 164 aa10.4□□□□□ -0.74
SSR4-207ENST00000471724 SAV1Q9H4B6 383 aaPredicted RBP10.4□□□□□ -0.74
SSR4-207ENST00000471724 HLA-DRB4X5D2U9 266 aa10.4□□□□□ -0.74
SSR4-207ENST00000471724 AGRNO00468 2067 aa10.39□□□□□ -0.75
SSR4-207ENST00000471724 H2AFB1P0C5Y9 115 aa10.39□□□□□ -0.75
SSR4-207ENST00000471724 FHITP49789 147 aa10.39□□□□□ -0.75
SSR4-207ENST00000471724 APOC4P55056 127 aa10.39□□□□□ -0.75
SSR4-207ENST00000471724 ZNF124Q15973 351 aa10.39□□□□□ -0.75
SSR4-207ENST00000471724 ACTL10Q5JWF8 245 aa10.39□□□□□ -0.75
SSR4-207ENST00000471724 RPUSD4Q96CM3 377 aaKnown RBP10.39□□□□□ -0.75
SSR4-207ENST00000471724 C20orf173Q96LM9 149 aa10.39□□□□□ -0.75
SSR4-207ENST00000471724 CITED4Q96RK1 184 aa10.39□□□□□ -0.75
SSR4-207ENST00000471724 BOLA1Q9Y3E2 137 aa10.39□□□□□ -0.75
SSR4-207ENST00000471724 KIR2DL5BA0A0G2JN68 375 aa10.38□□□□□ -0.75
SSR4-207ENST00000471724 KIR2DL5BA0A0G2JPC4 375 aa10.38□□□□□ -0.75
SSR4-207ENST00000471724 A0A0J9YX75 114 aa10.38□□□□□ -0.75
SSR4-207ENST00000471724 ICAM4Q14773 271 aa10.38□□□□□ -0.75
SSR4-207ENST00000471724 IGFL4Q6B9Z1 124 aa10.38□□□□□ -0.75
SSR4-207ENST00000471724 ALKAL2Q6UX46 152 aa10.38□□□□□ -0.75
SSR4-207ENST00000471724 TRPT1Q86TN4 253 aaKnown RBP10.38□□□□□ -0.75
SSR4-207ENST00000471724 KIR2DL5AQ8N109 375 aa10.38□□□□□ -0.75
SSR4-207ENST00000471724 KIR2DL5BQ8NHK3 375 aa10.38□□□□□ -0.75
SSR4-207ENST00000471724 SUN5Q8TC36 379 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms