RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 CRHP06850 196 aa-0.07□□□□□ -2.42
RBM39-228ENST00000471635 RAB5CP51148 216 aa-0.07□□□□□ -2.42
RBM39-228ENST00000471635 FXYD4P59646 89 aa-0.07□□□□□ -2.42
RBM39-228ENST00000471635 OR10X1Q8NGY0 326 aa-0.07□□□□□ -2.42
RBM39-228ENST00000471635 CHCHD1Q96BP2 118 aaKnown RBP-0.07□□□□□ -2.42
RBM39-228ENST00000471635 HYLS1Q96M11 299 aa-0.07□□□□□ -2.42
RBM39-228ENST00000471635 SPRR2GQ9BYE4 73 aa-0.07□□□□□ -2.42
RBM39-228ENST00000471635 ENY2Q9NPA8 101 aa-0.07□□□□□ -2.42
RBM39-228ENST00000471635 ARL5AQ9Y689 179 aa-0.07□□□□□ -2.42
RBM39-228ENST00000471635 ZFYVE26Q68DK2 2539 aa-0.07□□□□□ -2.42
RBM39-228ENST00000471635 PTPRZ1P23471 2315 aaPredicted RBP-0.08□□□□□ -2.42
RBM39-228ENST00000471635 SSPOA2VEC9 5147 aa-0.08□□□□□ -2.42
RBM39-228ENST00000471635 C9orf170A2RU37 121 aa-0.08□□□□□ -2.42
RBM39-228ENST00000471635 C1QBP02746 253 aa-0.08□□□□□ -2.42
RBM39-228ENST00000471635 CST2P09228 141 aa-0.08□□□□□ -2.42
RBM39-228ENST00000471635 CCL4P13236 92 aa-0.08□□□□□ -2.42
RBM39-228ENST00000471635 EIF3IQ13347 325 aaKnown RBP-0.08□□□□□ -2.42
RBM39-228ENST00000471635 TAF1AQ15573 450 aaPredicted RBP-0.08□□□□□ -2.42
RBM39-228ENST00000471635 PLAC4Q8WY50 150 aa-0.08□□□□□ -2.42
RBM39-228ENST00000471635 OPTCQ9UBM4 332 aa-0.08□□□□□ -2.42
RBM39-228ENST00000471635 HSPB8Q9UJY1 196 aa-0.08□□□□□ -2.42
RBM39-228ENST00000471635 MIA2Q96PC5 1412 aa-0.08□□□□□ -2.42
RBM39-228ENST00000471635 DMBT1Q9UGM3 2413 aaPredicted RBP-0.08□□□□□ -2.42
RBM39-228ENST00000471635 NFYBP25208 207 aa-0.09□□□□□ -2.42
RBM39-228ENST00000471635 INSL3P51460 131 aa-0.09□□□□□ -2.42
RBM39-228ENST00000471635 HSPE1P61604 102 aaKnown RBP-0.09□□□□□ -2.42
RBM39-228ENST00000471635 SPA17Q15506 151 aa-0.09□□□□□ -2.42
RBM39-228ENST00000471635 OCIAD2Q56VL3 154 aa-0.09□□□□□ -2.42
RBM39-228ENST00000471635 SPINK6Q6UWN8 80 aa-0.09□□□□□ -2.42
RBM39-228ENST00000471635 Q6ZQY7 126 aa-0.09□□□□□ -2.42
RBM39-228ENST00000471635 S100A7AQ86SG5 101 aa-0.09□□□□□ -2.42
RBM39-228ENST00000471635 Q86TA4 180 aa-0.09□□□□□ -2.42
RBM39-228ENST00000471635 OR4K15Q8NH41 348 aa-0.09□□□□□ -2.42
RBM39-228ENST00000471635 LIMD2Q9BT23 127 aa-0.09□□□□□ -2.42
RBM39-228ENST00000471635 C9orf16Q9BUW7 83 aa-0.09□□□□□ -2.42
RBM39-228ENST00000471635 POPDC3Q9HBV1 291 aa-0.09□□□□□ -2.42
RBM39-228ENST00000471635 ASB4Q9Y574 426 aa-0.09□□□□□ -2.42
RBM39-228ENST00000471635 PIEZO1Q92508 2521 aa-0.09□□□□□ -2.42
RBM39-228ENST00000471635 hDV103S1A0JD37 113 aa-0.1□□□□□ -2.43
RBM39-228ENST00000471635 K7ERJ3 54 aa-0.1□□□□□ -2.43
RBM39-228ENST00000471635 BANF1O75531 89 aa-0.1□□□□□ -2.43
RBM39-228ENST00000471635 CXCL1P09341 107 aa-0.1□□□□□ -2.43
RBM39-228ENST00000471635 CTXN2P0C2S0 81 aa-0.1□□□□□ -2.43
RBM39-228ENST00000471635 ARPP19P56211 112 aa-0.1□□□□□ -2.43
RBM39-228ENST00000471635 VBP1P61758 197 aa-0.1□□□□□ -2.43
RBM39-228ENST00000471635 KLRD1Q13241 179 aa-0.1□□□□□ -2.43
RBM39-228ENST00000471635 LRRC18Q8N456 261 aa-0.1□□□□□ -2.43
RBM39-228ENST00000471635 PPTC7Q8NI37 304 aa-0.1□□□□□ -2.43
RBM39-228ENST00000471635 ZHX1-C8orf76Q96EF9 292 aa-0.1□□□□□ -2.43
RBM39-228ENST00000471635 CCL19Q99731 98 aa-0.1□□□□□ -2.43
RBM39-228ENST00000471635 TCEAL2Q9H3H9 227 aaPredicted RBP-0.1□□□□□ -2.43
RBM39-228ENST00000471635 RNF11Q9Y3C5 154 aa-0.1□□□□□ -2.43
RBM39-228ENST00000471635 TRPM1Q7Z4N2 1603 aa-0.1□□□□□ -2.43
RBM39-228ENST00000471635 LRP1Q07954 4544 aaKnown RBP-0.1□□□□□ -2.43
RBM39-228ENST00000471635 FRMPD1Q5SYB0 1578 aa-0.11□□□□□ -2.43
RBM39-228ENST00000471635 LOC285556D6RIA3 1793 aa-0.11□□□□□ -2.43
RBM39-228ENST00000471635 SERPINA1P01009 418 aa-0.11□□□□□ -2.43
RBM39-228ENST00000471635 TMBIM6P55061 237 aa-0.11□□□□□ -2.43
RBM39-228ENST00000471635 FXYD6P3P58550 94 aa-0.11□□□□□ -2.43
RBM39-228ENST00000471635 NCALDP61601 193 aa-0.11□□□□□ -2.43
RBM39-228ENST00000471635 ZNF714Q96N38 554 aa-0.11□□□□□ -2.43
RBM39-228ENST00000471635 CACYBPQ9HB71 228 aaKnown RBP-0.11□□□□□ -2.43
RBM39-228ENST00000471635 IGSF10Q6WRI0 2623 aa-0.11□□□□□ -2.43
RBM39-228ENST00000471635 IGF2RP11717 2491 aa-0.11□□□□□ -2.43
RBM39-228ENST00000471635 NUP210LQ5VU65 1888 aa-0.12□□□□□ -2.43
RBM39-228ENST00000471635 NCOR2Q9Y618 2525 aa-0.12□□□□□ -2.43
RBM39-228ENST00000471635 PTPRDP23468 1912 aa-0.12□□□□□ -2.43
RBM39-228ENST00000471635 DUXBA0A1W2PPF3 345 aa-0.12□□□□□ -2.43
RBM39-228ENST00000471635 IGHV3-33P01772 117 aa-0.12□□□□□ -2.43
RBM39-228ENST00000471635 RPL37AP61513 92 aaKnown RBP-0.12□□□□□ -2.43
RBM39-228ENST00000471635 QRFPP83859 136 aa-0.12□□□□□ -2.43
RBM39-228ENST00000471635 MIR22HGQ0VDD5 57 aa-0.12□□□□□ -2.43
RBM39-228ENST00000471635 AKIRIN2Q53H80 203 aa-0.12□□□□□ -2.43
RBM39-228ENST00000471635 FOXI2Q6ZQN5 318 aa-0.12□□□□□ -2.43
RBM39-228ENST00000471635 PRR15Q8IV56 129 aa-0.12□□□□□ -2.43
RBM39-228ENST00000471635 RMND5BQ96G75 393 aaPredicted RBP-0.12□□□□□ -2.43
RBM39-228ENST00000471635 ARMC1Q9NVT9 282 aa-0.12□□□□□ -2.43
RBM39-228ENST00000471635 ARL2BPQ9Y2Y0 163 aa-0.12□□□□□ -2.43
RBM39-228ENST00000471635 UBR2Q8IWV8 1755 aa-0.12□□□□□ -2.43
RBM39-228ENST00000471635 ADGRL3Q9HAR2 1447 aa-0.13□□□□□ -2.43
RBM39-228ENST00000471635 NISCHQ9Y2I1 1504 aa-0.13□□□□□ -2.43
RBM39-228ENST00000471635 RER1O15258 196 aa-0.13□□□□□ -2.43
RBM39-228ENST00000471635 IDO1P14902 403 aa-0.13□□□□□ -2.43
RBM39-228ENST00000471635 LINC00299Q6ZSB3 139 aa-0.13□□□□□ -2.43
RBM39-228ENST00000471635 DGCR14Q96DF8 476 aaKnown RBP-0.13□□□□□ -2.43
RBM39-228ENST00000471635 GPX7Q96SL4 187 aaPredicted RBP-0.13□□□□□ -2.43
RBM39-228ENST00000471635 N4BP2Q86UW6 1770 aaPredicted RBP-0.14□□□□□ -2.43
RBM39-228ENST00000471635 HRNRQ86YZ3 2850 aaPredicted RBP-0.14□□□□□ -2.43
RBM39-228ENST00000471635 CACNA1HO95180 2353 aa-0.14□□□□□ -2.43
RBM39-228ENST00000471635 A0A096LPI6 279 aa-0.14□□□□□ -2.43
RBM39-228ENST00000471635 A0A0J9YY99 117 aa-0.14□□□□□ -2.43
RBM39-228ENST00000471635 ODAMA1E959 279 aa-0.14□□□□□ -2.43
RBM39-228ENST00000471635 LY6G6CO95867 125 aa-0.14□□□□□ -2.43
RBM39-228ENST00000471635 TRGC2P03986 189 aa-0.14□□□□□ -2.43
RBM39-228ENST00000471635 IFNA6P05013 189 aa-0.14□□□□□ -2.43
RBM39-228ENST00000471635 PDE6GP18545 87 aa-0.14□□□□□ -2.43
RBM39-228ENST00000471635 MSMO1Q15800 293 aa-0.14□□□□□ -2.43
RBM39-228ENST00000471635 ZCCHC23Q6ZST2 131 aa-0.14□□□□□ -2.43
RBM39-228ENST00000471635 OR2J1Q9GZK6 312 aa-0.14□□□□□ -2.43
RBM39-228ENST00000471635 MAP1LC3BQ9GZQ8 125 aa-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms