RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 CHD4Q14839 1912 aa5.61□□□□□ -1.51
BRCA1-210ENST00000471181 IGHV4OR15-8A0A075B7B6 117 aa5.61□□□□□ -1.51
BRCA1-210ENST00000471181 A0A087WW49 117 aa5.61□□□□□ -1.51
BRCA1-210ENST00000471181 IGHV1-18A0A0C4DH31 117 aa5.61□□□□□ -1.51
BRCA1-210ENST00000471181 B4DSR2 109 aa5.61□□□□□ -1.51
BRCA1-210ENST00000471181 B5MCH6 92 aa5.61□□□□□ -1.51
BRCA1-210ENST00000471181 H0Y9J4 135 aa5.61□□□□□ -1.51
BRCA1-210ENST00000471181 TMEM213A2RRL7 107 aa5.61□□□□□ -1.51
BRCA1-210ENST00000471181 ITGBL1O95965 494 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-210ENST00000471181 ZNF672Q499Z4 452 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-210ENST00000471181 USMG5Q96IX5 58 aa5.61□□□□□ -1.51
BRCA1-210ENST00000471181 UTRNP46939 3433 aa5.61□□□□□ -1.51
BRCA1-210ENST00000471181 IGKV3D-7A0A0C4DH55 119 aa5.61□□□□□ -1.51
BRCA1-210ENST00000471181 K7ERJ3 54 aa5.61□□□□□ -1.51
BRCA1-210ENST00000471181 BUB3O43684 328 aa5.61□□□□□ -1.51
BRCA1-210ENST00000471181 NDUFS6O75380 124 aaKnown RBP5.61□□□□□ -1.51
BRCA1-210ENST00000471181 IGHV1-46P01743 117 aa5.61□□□□□ -1.51
BRCA1-210ENST00000471181 C2orf66Q6UXQ4 117 aa5.61□□□□□ -1.51
BRCA1-210ENST00000471181 M0R1W7 72 aa5.6□□□□□ -1.51
BRCA1-210ENST00000471181 BAALC-AS2P0C853 105 aa5.6□□□□□ -1.51
BRCA1-210ENST00000471181 GNLYP22749 145 aa5.6□□□□□ -1.51
BRCA1-210ENST00000471181 EFNA4P52798 201 aa5.6□□□□□ -1.51
BRCA1-210ENST00000471181 RUSC1-AS1Q66K80 236 aa5.6□□□□□ -1.51
BRCA1-210ENST00000471181 C9orf118A6NHY6 69 aa5.6□□□□□ -1.51
BRCA1-210ENST00000471181 IGHV1-8P0DP01 117 aa5.6□□□□□ -1.51
BRCA1-210ENST00000471181 PSMB8P28062 276 aa5.6□□□□□ -1.51
BRCA1-210ENST00000471181 FOXE3Q13461 319 aa5.6□□□□□ -1.51
BRCA1-210ENST00000471181 ZNF837Q96EG3 531 aaPredicted RBP5.6□□□□□ -1.51
BRCA1-210ENST00000471181 VSIG2Q96IQ7 327 aa5.6□□□□□ -1.51
BRCA1-210ENST00000471181 TRGV9Q99603 122 aa5.6□□□□□ -1.51
BRCA1-210ENST00000471181 DAZ1Q9NQZ3 744 aaKnown RBP5.6□□□□□ -1.51
BRCA1-210ENST00000471181 GOLGB1Q14789 3259 aaKnown RBP5.6□□□□□ -1.51
BRCA1-210ENST00000471181 IGHV1OR15-1A0A075B7D0 117 aa5.6□□□□□ -1.51
BRCA1-210ENST00000471181 LINC01356Q8N9X3 169 aa5.6□□□□□ -1.51
BRCA1-210ENST00000471181 CHCHD2Q9Y6H1 151 aaPredicted RBP5.6□□□□□ -1.51
BRCA1-210ENST00000471181 C4orf51C9J302 202 aa5.6□□□□□ -1.51
BRCA1-210ENST00000471181 F8W1H4 67 aa5.6□□□□□ -1.51
BRCA1-210ENST00000471181 LINC01590Q5TEZ4 76 aa5.6□□□□□ -1.51
BRCA1-210ENST00000471181 COX7B2Q8TF08 81 aa5.6□□□□□ -1.51
BRCA1-210ENST00000471181 NUP205Q92621 2012 aa5.6□□□□□ -1.51
BRCA1-210ENST00000471181 TRAV3A0A0B4J244 114 aa5.59□□□□□ -1.51
BRCA1-210ENST00000471181 MRPL23Q16540 153 aaKnown RBP5.59□□□□□ -1.51
BRCA1-210ENST00000471181 ETDBQ3ZM63 59 aa5.59□□□□□ -1.51
BRCA1-210ENST00000471181 RNF126Q9BV68 326 aa5.59□□□□□ -1.51
BRCA1-210ENST00000471181 KIAA0100Q14667 2235 aaKnown RBP5.59□□□□□ -1.51
BRCA1-210ENST00000471181 Q86TA4 180 aa5.59□□□□□ -1.51
BRCA1-210ENST00000471181 NTN5Q8WTR8 489 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-210ENST00000471181 MAPK1IP1LQ8NDC0 245 aa5.59□□□□□ -1.51
BRCA1-210ENST00000471181 WIPF2Q8TF74 440 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-210ENST00000471181 U3KQE9 123 aa5.59□□□□□ -1.51
BRCA1-210ENST00000471181 SCN8AQ9UQD0 1980 aa5.59□□□□□ -1.51
BRCA1-210ENST00000471181 UBE2E1P51965 193 aa5.59□□□□□ -1.51
BRCA1-210ENST00000471181 HGFACQ04756 655 aa5.59□□□□□ -1.51
BRCA1-210ENST00000471181 NREPQ16612 68 aa5.59□□□□□ -1.51
BRCA1-210ENST00000471181 MST1LQ2TV78 715 aa5.59□□□□□ -1.51
BRCA1-210ENST00000471181 CD200R1LQ6Q8B3 271 aa5.59□□□□□ -1.51
BRCA1-210ENST00000471181 AGMATQ9BSE5 352 aa5.59□□□□□ -1.51
BRCA1-210ENST00000471181 FBLN5Q9UBX5 448 aa5.59□□□□□ -1.51
BRCA1-210ENST00000471181 PRO1854Q9UHT4 67 aa5.59□□□□□ -1.51
BRCA1-210ENST00000471181 WDR83OSQ9Y284 106 aa5.59□□□□□ -1.51
BRCA1-210ENST00000471181 K7EP34 96 aa5.59□□□□□ -1.52
BRCA1-210ENST00000471181 NCR3O14931 201 aa5.59□□□□□ -1.52
BRCA1-210ENST00000471181 EFNA2O43921 213 aa5.59□□□□□ -1.52
BRCA1-210ENST00000471181 LINC00271P0C7V0 271 aa5.59□□□□□ -1.52
BRCA1-210ENST00000471181 GLRX5Q86SX6 157 aa5.59□□□□□ -1.52
BRCA1-210ENST00000471181 CEND1Q8N111 149 aa5.59□□□□□ -1.52
BRCA1-210ENST00000471181 WDR90Q96KV7 1748 aa5.59□□□□□ -1.52
BRCA1-210ENST00000471181 RNF223E7ERA6 249 aa5.58□□□□□ -1.52
BRCA1-210ENST00000471181 MPZP25189 248 aa5.58□□□□□ -1.52
BRCA1-210ENST00000471181 MINOS1Q5TGZ0 78 aa5.58□□□□□ -1.52
BRCA1-210ENST00000471181 Q8N8P6 123 aa5.58□□□□□ -1.52
BRCA1-210ENST00000471181 MINOS1-NBL1R4GNA1 71 aa5.58□□□□□ -1.52
BRCA1-210ENST00000471181 IGHV1-24A0A0C4DH33 117 aa5.58□□□□□ -1.52
BRCA1-210ENST00000471181 HERVK_113P63121 156 aa5.58□□□□□ -1.52
BRCA1-210ENST00000471181 FAM181AQ8N9Y4 354 aa5.58□□□□□ -1.52
BRCA1-210ENST00000471181 KLHDC3Q9BQ90 382 aa5.58□□□□□ -1.52
BRCA1-210ENST00000471181 PKIGQ9Y2B9 76 aa5.58□□□□□ -1.52
BRCA1-210ENST00000471181 RFNGQ9Y644 331 aa5.58□□□□□ -1.52
BRCA1-210ENST00000471181 CSRP2Q16527 193 aa5.58□□□□□ -1.52
BRCA1-210ENST00000471181 C5orf64Q2M2E5 130 aa5.58□□□□□ -1.52
BRCA1-210ENST00000471181 MRPL14Q6P1L8 145 aaKnown RBP5.58□□□□□ -1.52
BRCA1-210ENST00000471181 LINC01551Q86U37 167 aa5.58□□□□□ -1.52
BRCA1-210ENST00000471181 IGHV3-30P01768 117 aa5.58□□□□□ -1.52
BRCA1-210ENST00000471181 IGHV3-33P01772 117 aa5.58□□□□□ -1.52
BRCA1-210ENST00000471181 IGHV3-30-3P0DP02 117 aa5.58□□□□□ -1.52
BRCA1-210ENST00000471181 IGHV3-30-5P0DP03 117 aa5.58□□□□□ -1.52
BRCA1-210ENST00000471181 SMIM20Q8N5G0 67 aa5.58□□□□□ -1.52
BRCA1-210ENST00000471181 WBP1Q96G27 269 aa5.58□□□□□ -1.52
BRCA1-210ENST00000471181 MRPL27Q9P0M9 148 aaKnown RBP5.58□□□□□ -1.52
BRCA1-210ENST00000471181 SCN3AQ9NY46 2000 aa5.58□□□□□ -1.52
BRCA1-210ENST00000471181 TRAV4A0A0B4J268 109 aa5.58□□□□□ -1.52
BRCA1-210ENST00000471181 MPLKIPQ8TAP9 179 aa5.58□□□□□ -1.52
BRCA1-210ENST00000471181 LYZL4Q96KX0 146 aa5.58□□□□□ -1.52
BRCA1-210ENST00000471181 SPANXCQ9NY87 97 aa5.58□□□□□ -1.52
BRCA1-210ENST00000471181 RP1L1Q8IWN7 2480 aaPredicted RBP5.57□□□□□ -1.52
BRCA1-210ENST00000471181 SCN9AQ15858 1988 aa5.57□□□□□ -1.52
BRCA1-210ENST00000471181 SDHAF1A6NFY7 115 aa5.57□□□□□ -1.52
BRCA1-210ENST00000471181 H3BMG7 143 aa5.57□□□□□ -1.52
BRCA1-210ENST00000471181 FANCD2OSQ96PS1 177 aa5.57□□□□□ -1.52
BRCA1-210ENST00000471181 HS3ST6Q96QI5 342 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms