RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 CASP8AP2Q9UKL3 1982 aa3.97□□□□□ -1.77
COL3A1-205ENST00000470167 WI2-2373I1.2A0A1W2PRP0 233 aa3.97□□□□□ -1.77
COL3A1-205ENST00000470167 LINC01553A4QN01 128 aa3.97□□□□□ -1.77
COL3A1-205ENST00000470167 PGPA6NDG6 321 aa3.97□□□□□ -1.77
COL3A1-205ENST00000470167 CEBPZOSA8MTT3 80 aa3.97□□□□□ -1.77
COL3A1-205ENST00000470167 PRRG2O14669 202 aa3.97□□□□□ -1.77
COL3A1-205ENST00000470167 HOXB7P09629 217 aa3.97□□□□□ -1.77
COL3A1-205ENST00000470167 ERVK-16P61578 105 aa3.97□□□□□ -1.77
COL3A1-205ENST00000470167 MLF2Q15773 248 aaPredicted RBP3.97□□□□□ -1.77
COL3A1-205ENST00000470167 ECSCRQ19T08 205 aa3.97□□□□□ -1.77
COL3A1-205ENST00000470167 TMEM170BQ5T4T1 132 aa3.97□□□□□ -1.77
COL3A1-205ENST00000470167 WDR86Q86TI4 376 aa3.97□□□□□ -1.77
COL3A1-205ENST00000470167 RPP25LQ8N5L8 163 aaKnown RBP3.97□□□□□ -1.77
COL3A1-205ENST00000470167 TMEM230Q96A57 120 aa3.97□□□□□ -1.77
COL3A1-205ENST00000470167 FRG2BQ96QU4 278 aa3.97□□□□□ -1.77
COL3A1-205ENST00000470167 TXNDC17Q9BRA2 123 aa3.97□□□□□ -1.77
COL3A1-205ENST00000470167 LINC00527Q9UJ94 153 aa3.97□□□□□ -1.77
COL3A1-205ENST00000470167 ANAPC10Q9UM13 185 aa3.97□□□□□ -1.77
COL3A1-205ENST00000470167 MUC6Q6W4X9 2439 aa3.97□□□□□ -1.77
COL3A1-205ENST00000470167 ITGB4P16144 1822 aa3.97□□□□□ -1.77
COL3A1-205ENST00000470167 C15orf62A8K5M9 175 aa3.96□□□□□ -1.78
COL3A1-205ENST00000470167 INS-IGF2F8WCM5 200 aa3.96□□□□□ -1.78
COL3A1-205ENST00000470167 J3QT63 122 aa3.96□□□□□ -1.78
COL3A1-205ENST00000470167 NDUFS5O43920 106 aa3.96□□□□□ -1.78
COL3A1-205ENST00000470167 GCHFRP30047 84 aa3.96□□□□□ -1.78
COL3A1-205ENST00000470167 SUPT4H1P63272 117 aaKnown RBP3.96□□□□□ -1.78
COL3A1-205ENST00000470167 UBE2L3P68036 154 aaKnown RBP3.96□□□□□ -1.78
COL3A1-205ENST00000470167 PAX8Q06710 450 aa3.96□□□□□ -1.78
COL3A1-205ENST00000470167 TMEM30BQ3MIR4 351 aa3.96□□□□□ -1.78
COL3A1-205ENST00000470167 SPANXN4Q5MJ08 99 aa3.96□□□□□ -1.78
COL3A1-205ENST00000470167 SDIM1Q6ZPB5 146 aa3.96□□□□□ -1.78
COL3A1-205ENST00000470167 C6orf201Q7Z4U5 140 aa3.96□□□□□ -1.78
COL3A1-205ENST00000470167 SFTPA2Q8IWL1 248 aa3.96□□□□□ -1.78
COL3A1-205ENST00000470167 TMEM252Q8N6L7 170 aa3.96□□□□□ -1.78
COL3A1-205ENST00000470167 ATXN7L3BQ96GX2 97 aa3.96□□□□□ -1.78
COL3A1-205ENST00000470167 C17orf77Q96MU5 243 aa3.96□□□□□ -1.78
COL3A1-205ENST00000470167 TRGV9Q99603 122 aa3.96□□□□□ -1.78
COL3A1-205ENST00000470167 CXCL16Q9H2A7 254 aa3.96□□□□□ -1.78
COL3A1-205ENST00000470167 PLEKHA3Q9HB20 300 aa3.96□□□□□ -1.78
COL3A1-205ENST00000470167 RNF186Q9NXI6 227 aa3.96□□□□□ -1.78
COL3A1-205ENST00000470167 SLC25A15Q9Y619 301 aa3.96□□□□□ -1.78
COL3A1-205ENST00000470167 PLXNA1Q9UIW2 1896 aa3.96□□□□□ -1.78
COL3A1-205ENST00000470167 SIP14410 1827 aa3.95□□□□□ -1.78
COL3A1-205ENST00000470167 PIKFYVEQ9Y2I7 2098 aa3.95□□□□□ -1.78
COL3A1-205ENST00000470167 NLRC5Q86WI3 1866 aa3.95□□□□□ -1.78
COL3A1-205ENST00000470167 IGHV3OR15-7A0A075B7D8 119 aa3.95□□□□□ -1.78
COL3A1-205ENST00000470167 UBE2L5PA0A1B0GUS4 154 aa3.95□□□□□ -1.78
COL3A1-205ENST00000470167 C16orf97H3BN30 126 aa3.95□□□□□ -1.78
COL3A1-205ENST00000470167 PIN1P1O15428 100 aa3.95□□□□□ -1.78
COL3A1-205ENST00000470167 CCL16O15467 120 aa3.95□□□□□ -1.78
COL3A1-205ENST00000470167 SRSF10O75494 262 aaKnown RBP3.95□□□□□ -1.78
COL3A1-205ENST00000470167 LEPROTL1O95214 131 aa3.95□□□□□ -1.78
COL3A1-205ENST00000470167 PPYP01298 95 aa3.95□□□□□ -1.78
COL3A1-205ENST00000470167 AQP1P29972 269 aa3.95□□□□□ -1.78
COL3A1-205ENST00000470167 S100A3P33764 101 aa3.95□□□□□ -1.78
COL3A1-205ENST00000470167 MYCNOSP40205 109 aa3.95□□□□□ -1.78
COL3A1-205ENST00000470167 ATP5EP56381 51 aaPredicted RBP3.95□□□□□ -1.78
COL3A1-205ENST00000470167 SERF2P84101 59 aa3.95□□□□□ -1.78
COL3A1-205ENST00000470167 KRTAP19-4Q3LI73 84 aa3.95□□□□□ -1.78
COL3A1-205ENST00000470167 PCSK4Q6UW60 755 aa3.95□□□□□ -1.78
COL3A1-205ENST00000470167 LINC00643Q86TS7 51 aa3.95□□□□□ -1.78
COL3A1-205ENST00000470167 MARCH3Q86UD3 253 aa3.95□□□□□ -1.78
COL3A1-205ENST00000470167 Q8N2B8 174 aa3.95□□□□□ -1.78
COL3A1-205ENST00000470167 DCANP1Q8TF63 244 aa3.95□□□□□ -1.78
COL3A1-205ENST00000470167 C8orf49Q96NF6 230 aa3.95□□□□□ -1.78
COL3A1-205ENST00000470167 PAXXQ9BUH6 204 aa3.95□□□□□ -1.78
COL3A1-205ENST00000470167 KRTAP4-2Q9BYR5 136 aa3.95□□□□□ -1.78
COL3A1-205ENST00000470167 CYSTM1Q9H1C7 97 aa3.95□□□□□ -1.78
COL3A1-205ENST00000470167 NXT2Q9NPJ8 142 aaKnown RBP3.95□□□□□ -1.78
COL3A1-205ENST00000470167 NHP2Q9NX24 153 aaKnown RBP3.95□□□□□ -1.78
COL3A1-205ENST00000470167 TRBV27A0A0K0K1C4 114 aa3.94□□□□□ -1.78
COL3A1-205ENST00000470167 C19orf71A6NCJ1 209 aa3.94□□□□□ -1.78
COL3A1-205ENST00000470167 K7ERJ3 54 aa3.94□□□□□ -1.78
COL3A1-205ENST00000470167 NDUFB3O43676 98 aa3.94□□□□□ -1.78
COL3A1-205ENST00000470167 NPYP01303 97 aa3.94□□□□□ -1.78
COL3A1-205ENST00000470167 ZNF823P16415 610 aa3.94□□□□□ -1.78
COL3A1-205ENST00000470167 LMO2P25791 158 aa3.94□□□□□ -1.78
COL3A1-205ENST00000470167 LIM2P55344 173 aa3.94□□□□□ -1.78
COL3A1-205ENST00000470167 SNRPD3P62318 126 aaKnown RBP3.94□□□□□ -1.78
COL3A1-205ENST00000470167 ORMDL2Q53FV1 153 aa3.94□□□□□ -1.78
COL3A1-205ENST00000470167 CENPWQ5EE01 88 aa3.94□□□□□ -1.78
COL3A1-205ENST00000470167 LCE1DQ5T752 114 aa3.94□□□□□ -1.78
COL3A1-205ENST00000470167 CEMP1Q6PRD7 247 aaPredicted RBP3.94□□□□□ -1.78
COL3A1-205ENST00000470167 RPS27LQ71UM5 84 aaKnown RBP3.94□□□□□ -1.78
COL3A1-205ENST00000470167 VN1R4Q7Z5H5 301 aa3.94□□□□□ -1.78
COL3A1-205ENST00000470167 OR5C1Q8NGR4 320 aa3.94□□□□□ -1.78
COL3A1-205ENST00000470167 FGFBP3Q8TAT2 258 aa3.94□□□□□ -1.78
COL3A1-205ENST00000470167 C11orf68Q9H3H3 251 aaKnown RBP3.94□□□□□ -1.78
COL3A1-205ENST00000470167 ZNF286AQ9HBT8 521 aa3.94□□□□□ -1.78
COL3A1-205ENST00000470167 CALYQ9NYX4 217 aa3.94□□□□□ -1.78
COL3A1-205ENST00000470167 IL36RNQ9UBH0 155 aa3.94□□□□□ -1.78
COL3A1-205ENST00000470167 DKK2Q9UBU2 259 aa3.94□□□□□ -1.78
COL3A1-205ENST00000470167 EPDR1Q9UM22 224 aa3.94□□□□□ -1.78
COL3A1-205ENST00000470167 ZNF292O60281 2723 aa3.94□□□□□ -1.78
COL3A1-205ENST00000470167 ZNF318Q5VUA4 2279 aa3.93□□□□□ -1.78
COL3A1-205ENST00000470167 TEP1Q99973 2627 aaKnown RBP3.93□□□□□ -1.78
COL3A1-205ENST00000470167 KMT2EQ8IZD2 1858 aa3.93□□□□□ -1.78
COL3A1-205ENST00000470167 MYMXA0A1B0GTQ4 84 aa3.93□□□□□ -1.78
COL3A1-205ENST00000470167 MED19A0JLT2 244 aaPredicted RBP3.93□□□□□ -1.78
COL3A1-205ENST00000470167 DDTLA6NHG4 134 aaPredicted RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms