RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 TMEM182Q6ZP80 229 aaPredicted RBP12.92□□□□□ -0.34
NCKIPSD-209ENST00000470006 Q6ZTI0 123 aa12.92□□□□□ -0.34
NCKIPSD-209ENST00000470006 LYZL2Q7Z4W2 148 aa12.92□□□□□ -0.34
NCKIPSD-209ENST00000470006 CCDC190Q86UF4 302 aa12.92□□□□□ -0.34
NCKIPSD-209ENST00000470006 C20orf144Q9BQM9 153 aa12.92□□□□□ -0.34
NCKIPSD-209ENST00000470006 J3KRW8 73 aa12.91□□□□□ -0.34
NCKIPSD-209ENST00000470006 AKR1C1Q04828 323 aa12.91□□□□□ -0.34
NCKIPSD-209ENST00000470006 YIPF6Q96EC8 236 aa12.91□□□□□ -0.34
NCKIPSD-209ENST00000470006 PARD6GQ9BYG4 376 aaPredicted RBP12.91□□□□□ -0.34
NCKIPSD-209ENST00000470006 GPR132Q9UNW8 380 aa12.91□□□□□ -0.34
NCKIPSD-209ENST00000470006 HIGD1AQ9Y241 93 aa12.91□□□□□ -0.34
NCKIPSD-209ENST00000470006 A0A0B4J2A0 478 aa12.9□□□□□ -0.34
NCKIPSD-209ENST00000470006 H3BRN7 92 aa12.9□□□□□ -0.34
NCKIPSD-209ENST00000470006 SERTAD4-AS1Q5TG53 156 aa12.9□□□□□ -0.34
NCKIPSD-209ENST00000470006 SHPKQ9UHJ6 478 aa12.9□□□□□ -0.34
NCKIPSD-209ENST00000470006 ICOSQ9Y6W8 199 aa12.9□□□□□ -0.34
NCKIPSD-209ENST00000470006 IGLV5-52A0A0A0MRZ9 124 aa12.89□□□□□ -0.35
NCKIPSD-209ENST00000470006 OR5G3P0C626 314 aa12.89□□□□□ -0.35
NCKIPSD-209ENST00000470006 NCS1P62166 190 aa12.89□□□□□ -0.35
NCKIPSD-209ENST00000470006 RPP30P78346 268 aaKnown RBP12.89□□□□□ -0.35
NCKIPSD-209ENST00000470006 GFI1BQ5VTD9 330 aa12.89□□□□□ -0.35
NCKIPSD-209ENST00000470006 C15orf40Q8WUR7 153 aa12.89□□□□□ -0.35
NCKIPSD-209ENST00000470006 SHANK2-AS3Q9BTD1 123 aa12.89□□□□□ -0.35
NCKIPSD-209ENST00000470006 NPIPB6E9PJ23 425 aa12.88□□□□□ -0.35
NCKIPSD-209ENST00000470006 PAX4O43316 350 aa12.88□□□□□ -0.35
NCKIPSD-209ENST00000470006 HYPMO75409 117 aa12.88□□□□□ -0.35
NCKIPSD-209ENST00000470006 IL5P05113 134 aa12.88□□□□□ -0.35
NCKIPSD-209ENST00000470006 ANXA7P20073 488 aaKnown RBP12.88□□□□□ -0.35
NCKIPSD-209ENST00000470006 VBP1P61758 197 aa12.88□□□□□ -0.35
NCKIPSD-209ENST00000470006 TMEM70Q9BUB7 260 aa12.88□□□□□ -0.35
NCKIPSD-209ENST00000470006 VCX3AQ9NNX9 186 aa12.88□□□□□ -0.35
NCKIPSD-209ENST00000470006 MSRB1Q9NZV6 116 aa12.88□□□□□ -0.35
NCKIPSD-209ENST00000470006 LY96Q9Y6Y9 160 aa12.88□□□□□ -0.35
NCKIPSD-209ENST00000470006 TRAV12-3A0A0B4J271 114 aa12.87□□□□□ -0.35
NCKIPSD-209ENST00000470006 SMCO3A2RU48 225 aa12.87□□□□□ -0.35
NCKIPSD-209ENST00000470006 KRTAP29-1A8MX34 341 aaPredicted RBP12.87□□□□□ -0.35
NCKIPSD-209ENST00000470006 PLA2G1BP04054 148 aaKnown RBP12.87□□□□□ -0.35
NCKIPSD-209ENST00000470006 TRGV1A0A0A0MS02 117 aa12.86□□□□□ -0.35
NCKIPSD-209ENST00000470006 ANXA3P12429 323 aa12.86□□□□□ -0.35
NCKIPSD-209ENST00000470006 DAZ2Q13117 558 aaKnown RBP12.86□□□□□ -0.35
NCKIPSD-209ENST00000470006 PRRT1Q99946 306 aa12.86□□□□□ -0.35
NCKIPSD-209ENST00000470006 A0A087X0K7 114 aa12.85□□□□□ -0.35
NCKIPSD-209ENST00000470006 WRBO00258 174 aa12.85□□□□□ -0.35
NCKIPSD-209ENST00000470006 MED6O75586 246 aa12.85□□□□□ -0.35
NCKIPSD-209ENST00000470006 SNRPCP09234 159 aaKnown RBP12.85□□□□□ -0.35
NCKIPSD-209ENST00000470006 AKAIN1P0CW23 69 aa12.85□□□□□ -0.35
NCKIPSD-209ENST00000470006 SRPXP78539 464 aa12.85□□□□□ -0.35
NCKIPSD-209ENST00000470006 LYPD5Q6UWN5 251 aa12.85□□□□□ -0.35
NCKIPSD-209ENST00000470006 CYP2G1PQ6ZSU1 146 aa12.85□□□□□ -0.35
NCKIPSD-209ENST00000470006 S100A7AQ86SG5 101 aa12.85□□□□□ -0.35
NCKIPSD-209ENST00000470006 OR51S1Q8NGJ8 323 aa12.85□□□□□ -0.35
NCKIPSD-209ENST00000470006 AP3S1Q92572 193 aa12.85□□□□□ -0.35
NCKIPSD-209ENST00000470006 FUT9Q9Y231 359 aa12.85□□□□□ -0.35
NCKIPSD-209ENST00000470006 PSCAO43653 123 aa12.84□□□□□ -0.35
NCKIPSD-209ENST00000470006 IGHV3-53P01767 116 aa12.84□□□□□ -0.35
NCKIPSD-209ENST00000470006 EVI2AP22794 236 aa12.84□□□□□ -0.35
NCKIPSD-209ENST00000470006 SSBP1Q04837 148 aaKnown RBP12.84□□□□□ -0.35
NCKIPSD-209ENST00000470006 SPANXN5Q5MJ07 72 aa12.84□□□□□ -0.35
NCKIPSD-209ENST00000470006 CLVS1Q8IUQ0 354 aaPredicted RBP12.84□□□□□ -0.35
NCKIPSD-209ENST00000470006 SCGB3A2Q96PL1 93 aa12.84□□□□□ -0.35
NCKIPSD-209ENST00000470006 CIB3Q96Q77 187 aaPredicted RBP12.84□□□□□ -0.35
NCKIPSD-209ENST00000470006 PYGO2Q9BRQ0 406 aa12.84□□□□□ -0.35
NCKIPSD-209ENST00000470006 GSN-AS1Q9NRJ2 163 aa12.84□□□□□ -0.35
NCKIPSD-209ENST00000470006 PMS2P5A8MQ11 134 aa12.83□□□□□ -0.36
NCKIPSD-209ENST00000470006 ZNF324O75467 553 aaPredicted RBP12.83□□□□□ -0.36
NCKIPSD-209ENST00000470006 LINC00869P0C866 280 aa12.83□□□□□ -0.36
NCKIPSD-209ENST00000470006 ACOT7LQ6ZUV0 252 aa12.83□□□□□ -0.36
NCKIPSD-209ENST00000470006 LINC00467Q9BRT7 94 aa12.83□□□□□ -0.36
NCKIPSD-209ENST00000470006 LEPP41159 167 aa12.82□□□□□ -0.36
NCKIPSD-209ENST00000470006 LCN15Q6UWW0 184 aa12.82□□□□□ -0.36
NCKIPSD-209ENST00000470006 DEFB104AQ8WTQ1 72 aa12.82□□□□□ -0.36
NCKIPSD-209ENST00000470006 ARL6Q9H0F7 186 aa12.82□□□□□ -0.36
NCKIPSD-209ENST00000470006 PRAC2D3DTV9 90 aa12.81□□□□□ -0.36
NCKIPSD-209ENST00000470006 PRSS46E5RG02 174 aa12.81□□□□□ -0.36
NCKIPSD-209ENST00000470006 H3BP45 60 aa12.81□□□□□ -0.36
NCKIPSD-209ENST00000470006 PITX3O75364 302 aa12.81□□□□□ -0.36
NCKIPSD-209ENST00000470006 MRPL23Q16540 153 aaKnown RBP12.81□□□□□ -0.36
NCKIPSD-209ENST00000470006 ZNF680Q8NEM1 530 aa12.81□□□□□ -0.36
NCKIPSD-209ENST00000470006 SLC50A1Q9BRV3 221 aa12.81□□□□□ -0.36
NCKIPSD-209ENST00000470006 FUNDC2Q9BWH2 189 aa12.81□□□□□ -0.36
NCKIPSD-209ENST00000470006 ZNF331Q9NQX6 463 aaPredicted RBP12.81□□□□□ -0.36
NCKIPSD-209ENST00000470006 SCP2D1Q9UJQ7 156 aa12.81□□□□□ -0.36
NCKIPSD-209ENST00000470006 PLA2G2DQ9UNK4 145 aa12.81□□□□□ -0.36
NCKIPSD-209ENST00000470006 PIGBOS1A0A0B4J2F0 54 aa12.8□□□□□ -0.36
NCKIPSD-209ENST00000470006 SYNGR2O43760 224 aa12.8□□□□□ -0.36
NCKIPSD-209ENST00000470006 PRAF2O60831 178 aa12.8□□□□□ -0.36
NCKIPSD-209ENST00000470006 CXCL2P19875 107 aa12.8□□□□□ -0.36
NCKIPSD-209ENST00000470006 NEGR1Q7Z3B1 354 aa12.8□□□□□ -0.36
NCKIPSD-209ENST00000470006 ZBTB8BQ8NAP8 495 aaPredicted RBP12.8□□□□□ -0.36
NCKIPSD-209ENST00000470006 NTN5Q8WTR8 489 aaPredicted RBP12.8□□□□□ -0.36
NCKIPSD-209ENST00000470006 MCUBQ9NWR8 336 aa12.8□□□□□ -0.36
NCKIPSD-209ENST00000470006 FAM30AQ9NZY2 134 aa12.8□□□□□ -0.36
NCKIPSD-209ENST00000470006 PRO0255Q9UI72 69 aa12.8□□□□□ -0.36
NCKIPSD-209ENST00000470006 RNF24Q9Y225 148 aa12.8□□□□□ -0.36
NCKIPSD-209ENST00000470006 STRAPQ9Y3F4 350 aaKnown RBP12.8□□□□□ -0.36
NCKIPSD-209ENST00000470006 HMCN2Q8NDA2 5059 aa12.79□□□□□ -0.36
NCKIPSD-209ENST00000470006 H3BTX0 84 aa12.79□□□□□ -0.36
NCKIPSD-209ENST00000470006 K7EP13 123 aa12.79□□□□□ -0.36
NCKIPSD-209ENST00000470006 RGS5O15539 181 aa12.79□□□□□ -0.36
NCKIPSD-209ENST00000470006 CT45A10P0DMU9 189 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms