RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 SCGB2A2Q13296 93 aa13.92□□□□□ -0.18
SMC4-211ENST00000469858 TMEM183BQ1AE95 376 aa13.92□□□□□ -0.18
SMC4-211ENST00000469858 NHLRC2Q8NBF2 726 aa13.92□□□□□ -0.18
SMC4-211ENST00000469858 AAMDCQ9H7C9 122 aa13.92□□□□□ -0.18
SMC4-211ENST00000469858 ZNF320A2RRD8 509 aa13.91□□□□□ -0.18
SMC4-211ENST00000469858 LY6G6DO95868 133 aa13.91□□□□□ -0.18
SMC4-211ENST00000469858 OR5I1Q13606 314 aa13.91□□□□□ -0.18
SMC4-211ENST00000469858 C1orf194Q5T5A4 169 aa13.91□□□□□ -0.18
SMC4-211ENST00000469858 TMEM160Q9NX00 188 aa13.91□□□□□ -0.18
SMC4-211ENST00000469858 U3KQE9 123 aa13.91□□□□□ -0.18
SMC4-211ENST00000469858 ZNF785A8K8V0 405 aa13.91□□□□□ -0.18
SMC4-211ENST00000469858 IGLV2-8P01709 118 aa13.91□□□□□ -0.18
SMC4-211ENST00000469858 PRB4P10163 310 aaPredicted RBP13.91□□□□□ -0.18
SMC4-211ENST00000469858 MGST1P10620 155 aaKnown RBP13.91□□□□□ -0.18
SMC4-211ENST00000469858 CD99P14209 185 aa13.91□□□□□ -0.18
SMC4-211ENST00000469858 SRD5A1P18405 259 aa13.91□□□□□ -0.18
SMC4-211ENST00000469858 GALR1P47211 349 aa13.91□□□□□ -0.18
SMC4-211ENST00000469858 GOLT1AQ6ZVE7 132 aa13.91□□□□□ -0.18
SMC4-211ENST00000469858 TMEM190Q8WZ59 177 aa13.91□□□□□ -0.18
SMC4-211ENST00000469858 GPR82Q96P67 336 aa13.91□□□□□ -0.18
SMC4-211ENST00000469858 ANK3Q12955 4377 aaKnown RBP13.91□□□□□ -0.18
SMC4-211ENST00000469858 M0R3E3 92 aa13.9□□□□□ -0.18
SMC4-211ENST00000469858 PSG9Q00887 426 aa13.9□□□□□ -0.18
SMC4-211ENST00000469858 Q6ZSV7 163 aa13.9□□□□□ -0.18
SMC4-211ENST00000469858 BAGE2Q86Y30 109 aa13.9□□□□□ -0.18
SMC4-211ENST00000469858 TGIF2-C20orf24A0A0A6YYL0 155 aa13.89□□□□□ -0.19
SMC4-211ENST00000469858 KLHDC1Q8N7A1 406 aa13.89□□□□□ -0.19
SMC4-211ENST00000469858 MYOZ3Q8TDC0 251 aa13.89□□□□□ -0.19
SMC4-211ENST00000469858 FMC1Q96HJ9 113 aa13.89□□□□□ -0.19
SMC4-211ENST00000469858 KLF12Q9Y4X4 402 aa13.89□□□□□ -0.19
SMC4-211ENST00000469858 PPP1R2P9O14990 202 aa13.89□□□□□ -0.19
SMC4-211ENST00000469858 CXCL1P09341 107 aa13.89□□□□□ -0.19
SMC4-211ENST00000469858 OR10G8Q8NGN5 311 aa13.89□□□□□ -0.19
SMC4-211ENST00000469858 A0A087X0K7 114 aa13.88□□□□□ -0.19
SMC4-211ENST00000469858 TRAV8-1A0A0A6YYK1 113 aa13.88□□□□□ -0.19
SMC4-211ENST00000469858 CRYBA1P05813 215 aa13.88□□□□□ -0.19
SMC4-211ENST00000469858 LGALS1P09382 135 aaKnown RBP13.88□□□□□ -0.19
SMC4-211ENST00000469858 RAB5AP20339 215 aa13.88□□□□□ -0.19
SMC4-211ENST00000469858 ERVFC1-1P60608 527 aa13.88□□□□□ -0.19
SMC4-211ENST00000469858 RNF152Q8N8N0 203 aa13.88□□□□□ -0.19
SMC4-211ENST00000469858 CUBNO60494 3623 aa13.87□□□□□ -0.19
SMC4-211ENST00000469858 GCGP01275 180 aa13.87□□□□□ -0.19
SMC4-211ENST00000469858 S100A9P06702 114 aaKnown RBP13.87□□□□□ -0.19
SMC4-211ENST00000469858 IGFL4Q6B9Z1 124 aa13.87□□□□□ -0.19
SMC4-211ENST00000469858 UBE2E2Q96LR5 201 aa13.87□□□□□ -0.19
SMC4-211ENST00000469858 OTOGQ6ZRI0 2925 aa13.87□□□□□ -0.19
SMC4-211ENST00000469858 ZNF253O75346 499 aa13.87□□□□□ -0.19
SMC4-211ENST00000469858 S100PP25815 95 aa13.87□□□□□ -0.19
SMC4-211ENST00000469858 RPEL1Q2QD12 228 aa13.87□□□□□ -0.19
SMC4-211ENST00000469858 FAM106AQ4KMX7 169 aa13.87□□□□□ -0.19
SMC4-211ENST00000469858 C16orf54Q6UWD8 224 aa13.87□□□□□ -0.19
SMC4-211ENST00000469858 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.87□□□□□ -0.19
SMC4-211ENST00000469858 RNASE7Q9H1E1 156 aaKnown RBP13.87□□□□□ -0.19
SMC4-211ENST00000469858 ZNF331Q9NQX6 463 aaPredicted RBP13.87□□□□□ -0.19
SMC4-211ENST00000469858 HIVEP2P31629 2446 aa13.86□□□□□ -0.19
SMC4-211ENST00000469858 DIRC3C9JPN6 131 aa13.86□□□□□ -0.19
SMC4-211ENST00000469858 PFN1P07737 140 aaKnown RBP13.86□□□□□ -0.19
SMC4-211ENST00000469858 TM4SF20Q53R12 229 aa13.86□□□□□ -0.19
SMC4-211ENST00000469858 Q71RC1 249 aaPredicted RBP13.86□□□□□ -0.19
SMC4-211ENST00000469858 ZNF418Q8TF45 676 aaPredicted RBP13.86□□□□□ -0.19
SMC4-211ENST00000469858 GLMPQ8WWB7 406 aa13.86□□□□□ -0.19
SMC4-211ENST00000469858 DAZ1Q9NQZ3 744 aaKnown RBP13.86□□□□□ -0.19
SMC4-211ENST00000469858 MTORP42345 2549 aa13.86□□□□□ -0.19
SMC4-211ENST00000469858 K7EQM0 130 aa13.85□□□□□ -0.19
SMC4-211ENST00000469858 HLA-DMBP28068 263 aa13.85□□□□□ -0.19
SMC4-211ENST00000469858 CSN1S1P47710 185 aa13.85□□□□□ -0.19
SMC4-211ENST00000469858 Q86TA4 180 aa13.85□□□□□ -0.19
SMC4-211ENST00000469858 LTAP01374 205 aa13.85□□□□□ -0.19
SMC4-211ENST00000469858 IGLV2-11P01706 119 aa13.85□□□□□ -0.19
SMC4-211ENST00000469858 RNASE1P07998 156 aaKnown RBP13.85□□□□□ -0.19
SMC4-211ENST00000469858 PRR27Q6MZM9 219 aa13.85□□□□□ -0.19
SMC4-211ENST00000469858 PRNTQ86SH4 94 aa13.85□□□□□ -0.19
SMC4-211ENST00000469858 GPHB5Q86YW7 130 aa13.85□□□□□ -0.19
SMC4-211ENST00000469858 GRAMD2BQ96HH9 432 aa13.85□□□□□ -0.19
SMC4-211ENST00000469858 A0A1W2PS18 150 aa13.84□□□□□ -0.19
SMC4-211ENST00000469858 IBA57Q5T440 356 aaKnown RBP13.84□□□□□ -0.19
SMC4-211ENST00000469858 TMEM75Q8N9X5 138 aa13.84□□□□□ -0.19
SMC4-211ENST00000469858 SLC50A1Q9BRV3 221 aa13.84□□□□□ -0.19
SMC4-211ENST00000469858 IGHV4OR15-8A0A075B7B6 117 aa13.83□□□□□ -0.19
SMC4-211ENST00000469858 A0A087WW49 117 aa13.83□□□□□ -0.19
SMC4-211ENST00000469858 IGHV7-4-1A0A0J9YVY3 117 aa13.83□□□□□ -0.19
SMC4-211ENST00000469858 A0A1W2PPQ1 181 aa13.83□□□□□ -0.19
SMC4-211ENST00000469858 FOLR2P14207 255 aa13.83□□□□□ -0.19
SMC4-211ENST00000469858 RPS10P46783 165 aaKnown RBP13.83□□□□□ -0.19
SMC4-211ENST00000469858 KHDC1LQ5JSQ8 128 aa13.83□□□□□ -0.19
SMC4-211ENST00000469858 KCNIP4Q6PIL6 250 aa13.83□□□□□ -0.19
SMC4-211ENST00000469858 FAM210BQ96KR6 192 aa13.83□□□□□ -0.19
SMC4-211ENST00000469858 OSTCQ9NRP0 149 aa13.83□□□□□ -0.19
SMC4-211ENST00000469858 MLXQ9UH92 298 aa13.83□□□□□ -0.19
SMC4-211ENST00000469858 TRBV24-1A0A075B6N3 115 aa13.83□□□□□ -0.2
SMC4-211ENST00000469858 EDN2P20800 178 aa13.83□□□□□ -0.2
SMC4-211ENST00000469858 FAM3BP58499 235 aaPredicted RBP13.83□□□□□ -0.2
SMC4-211ENST00000469858 HILS1P60008 231 aa13.83□□□□□ -0.2
SMC4-211ENST00000469858 FLI1Q01543 452 aaPredicted RBP13.83□□□□□ -0.2
SMC4-211ENST00000469858 PSG3Q16557 428 aa13.83□□□□□ -0.2
SMC4-211ENST00000469858 C18orf65Q6ZTR6 163 aa13.83□□□□□ -0.2
SMC4-211ENST00000469858 C8orf86Q6ZUL3 223 aa13.83□□□□□ -0.2
SMC4-211ENST00000469858 RNF182Q8N6D2 247 aa13.83□□□□□ -0.2
SMC4-211ENST00000469858 SMIM12Q96EX1 92 aa13.83□□□□□ -0.2
SMC4-211ENST00000469858 MLST8Q9BVC4 326 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 2398.3 ms