RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 D6R8Y8 96 aa12.79□□□□□ -0.36
BRAT1-204ENST00000469750 EREGO14944 169 aa12.79□□□□□ -0.36
BRAT1-204ENST00000469750 LINC01559Q495D7 138 aa12.79□□□□□ -0.36
BRAT1-204ENST00000469750 USF3Q68DE3 2245 aa12.79□□□□□ -0.36
BRAT1-204ENST00000469750 LYL1P12980 280 aa12.78□□□□□ -0.36
BRAT1-204ENST00000469750 TMEM249Q2WGJ8 235 aa12.78□□□□□ -0.36
BRAT1-204ENST00000469750 IGKV1-6A0A0C4DH72 117 aa12.78□□□□□ -0.36
BRAT1-204ENST00000469750 ZNF562Q6V9R5 426 aa12.78□□□□□ -0.36
BRAT1-204ENST00000469750 ZNF664Q8N3J9 261 aa12.78□□□□□ -0.36
BRAT1-204ENST00000469750 A0A1W2PPI3 338 aa12.78□□□□□ -0.36
BRAT1-204ENST00000469750 PLNP26678 52 aa12.78□□□□□ -0.36
BRAT1-204ENST00000469750 DTX1Q86Y01 620 aa12.78□□□□□ -0.36
BRAT1-204ENST00000469750 TRGV1A0A0A0MS02 117 aa12.78□□□□□ -0.36
BRAT1-204ENST00000469750 RNF223E7ERA6 249 aa12.78□□□□□ -0.36
BRAT1-204ENST00000469750 GHRHP01286 108 aa12.78□□□□□ -0.36
BRAT1-204ENST00000469750 RPL36AP83881 106 aaKnown RBP12.78□□□□□ -0.36
BRAT1-204ENST00000469750 ZNF876PQ49A33 203 aa12.78□□□□□ -0.36
BRAT1-204ENST00000469750 RPL36ALQ969Q0 106 aaKnown RBP12.78□□□□□ -0.36
BRAT1-204ENST00000469750 DAZ1Q9NQZ3 744 aaKnown RBP12.78□□□□□ -0.36
BRAT1-204ENST00000469750 SMPXQ9UHP9 88 aa12.78□□□□□ -0.36
BRAT1-204ENST00000469750 ZNF815PA8K554 130 aa12.77□□□□□ -0.36
BRAT1-204ENST00000469750 MLANAQ16655 118 aa12.77□□□□□ -0.36
BRAT1-204ENST00000469750 A0A087WX48 190 aa12.77□□□□□ -0.36
BRAT1-204ENST00000469750 HOXA3O43365 443 aaPredicted RBP12.77□□□□□ -0.36
BRAT1-204ENST00000469750 OCIAD2Q56VL3 154 aa12.77□□□□□ -0.36
BRAT1-204ENST00000469750 MGAMO43451 1857 aa12.77□□□□□ -0.37
BRAT1-204ENST00000469750 GAGE12BA1L429 117 aa12.77□□□□□ -0.37
BRAT1-204ENST00000469750 RNF166Q96A37 237 aaPredicted RBP12.77□□□□□ -0.37
BRAT1-204ENST00000469750 DPH3P1Q9H4G8 78 aa12.77□□□□□ -0.37
BRAT1-204ENST00000469750 OVOL3O00110 214 aa12.77□□□□□ -0.37
BRAT1-204ENST00000469750 Q6ZR03 302 aa12.77□□□□□ -0.37
BRAT1-204ENST00000469750 VGLL1Q99990 258 aa12.77□□□□□ -0.37
BRAT1-204ENST00000469750 C1QTNF4Q9BXJ3 329 aa12.77□□□□□ -0.37
BRAT1-204ENST00000469750 CADP27708 2225 aa12.77□□□□□ -0.37
BRAT1-204ENST00000469750 SLC25A20O43772 301 aa12.76□□□□□ -0.37
BRAT1-204ENST00000469750 ZNF48Q96MX3 618 aaPredicted RBP12.76□□□□□ -0.37
BRAT1-204ENST00000469750 TRAV2A0A0B4J234 112 aa12.76□□□□□ -0.37
BRAT1-204ENST00000469750 A8MWP6 167 aa12.76□□□□□ -0.37
BRAT1-204ENST00000469750 RPL35AP18077 110 aaKnown RBP12.76□□□□□ -0.37
BRAT1-204ENST00000469750 RUSC1-AS1Q66K80 236 aa12.76□□□□□ -0.37
BRAT1-204ENST00000469750 IGFL4Q6B9Z1 124 aa12.76□□□□□ -0.37
BRAT1-204ENST00000469750 SLC25A2Q9BXI2 301 aa12.76□□□□□ -0.37
BRAT1-204ENST00000469750 ZNRD1Q9P1U0 126 aa12.76□□□□□ -0.37
BRAT1-204ENST00000469750 CD300EQ496F6 205 aaPredicted RBP12.76□□□□□ -0.37
BRAT1-204ENST00000469750 SHANK2-AS3Q9BTD1 123 aa12.76□□□□□ -0.37
BRAT1-204ENST00000469750 RSPO3Q9BXY4 272 aaPredicted RBP12.76□□□□□ -0.37
BRAT1-204ENST00000469750 RNF114Q9Y508 228 aa12.76□□□□□ -0.37
BRAT1-204ENST00000469750 TICRRQ7Z2Z1 1910 aa12.76□□□□□ -0.37
BRAT1-204ENST00000469750 TRAV8-1A0A0A6YYK1 113 aa12.76□□□□□ -0.37
BRAT1-204ENST00000469750 IGHV3-73A0A0B4J1V6 119 aa12.76□□□□□ -0.37
BRAT1-204ENST00000469750 SLX1AQ9BQ83 275 aa12.76□□□□□ -0.37
BRAT1-204ENST00000469750 INSP01308 110 aa12.75□□□□□ -0.37
BRAT1-204ENST00000469750 ZNF407Q9C0G0 2248 aa12.75□□□□□ -0.37
BRAT1-204ENST00000469750 IGHV2-70P01814 119 aa12.75□□□□□ -0.37
BRAT1-204ENST00000469750 FXYD7P58549 80 aa12.75□□□□□ -0.37
BRAT1-204ENST00000469750 SSBP2P81877 361 aaPredicted RBP12.75□□□□□ -0.37
BRAT1-204ENST00000469750 NUP35Q8NFH5 326 aa12.75□□□□□ -0.37
BRAT1-204ENST00000469750 FAM110DQ8TAY7 271 aaPredicted RBP12.75□□□□□ -0.37
BRAT1-204ENST00000469750 COX11Q9Y6N1 276 aa12.75□□□□□ -0.37
BRAT1-204ENST00000469750 WISP1O95388 367 aa12.75□□□□□ -0.37
BRAT1-204ENST00000469750 PDE6HQ13956 83 aa12.74□□□□□ -0.37
BRAT1-204ENST00000469750 SPINK8P0C7L1 97 aa12.74□□□□□ -0.37
BRAT1-204ENST00000469750 SYNJ2BPP57105 145 aa12.74□□□□□ -0.37
BRAT1-204ENST00000469750 TMEM86BQ8N661 226 aa12.74□□□□□ -0.37
BRAT1-204ENST00000469750 CST9LQ9H4G1 147 aa12.74□□□□□ -0.37
BRAT1-204ENST00000469750 IGHV1-69DA0A0B4J2H0 117 aa12.74□□□□□ -0.37
BRAT1-204ENST00000469750 ATP6V0E1O15342 81 aa12.74□□□□□ -0.37
BRAT1-204ENST00000469750 IGHV1-69P01742 117 aa12.74□□□□□ -0.37
BRAT1-204ENST00000469750 GAGE1Q13065 139 aa12.74□□□□□ -0.37
BRAT1-204ENST00000469750 MORN3Q6PF18 240 aaPredicted RBP12.74□□□□□ -0.37
BRAT1-204ENST00000469750 PGPEP1Q9NXJ5 209 aa12.74□□□□□ -0.37
BRAT1-204ENST00000469750 WNK2Q9Y3S1 2297 aa12.73□□□□□ -0.37
BRAT1-204ENST00000469750 VCYO14598 125 aa12.73□□□□□ -0.37
BRAT1-204ENST00000469750 IGHV3-64A0A075B6Q5 118 aa12.73□□□□□ -0.37
BRAT1-204ENST00000469750 TMEM14BQ9NUH8 114 aa12.73□□□□□ -0.37
BRAT1-204ENST00000469750 DOCK7Q96N67 2140 aa12.73□□□□□ -0.37
BRAT1-204ENST00000469750 Q86TA4 180 aa12.73□□□□□ -0.37
BRAT1-204ENST00000469750 UBE2E2Q96LR5 201 aa12.73□□□□□ -0.37
BRAT1-204ENST00000469750 C1orf147Q96MC9 270 aaPredicted RBP12.73□□□□□ -0.37
BRAT1-204ENST00000469750 A0A0U1RRA0 63 aa12.72□□□□□ -0.37
BRAT1-204ENST00000469750 SFTA2Q6UW10 78 aa12.72□□□□□ -0.37
BRAT1-204ENST00000469750 IGHV2-70DA0A0C4DH43 119 aa12.72□□□□□ -0.37
BRAT1-204ENST00000469750 IGHV3-53P01767 116 aa12.72□□□□□ -0.37
BRAT1-204ENST00000469750 PRR31Q5SQ13 230 aa12.72□□□□□ -0.37
BRAT1-204ENST00000469750 ZNF833PQ6ZTB9 187 aa12.72□□□□□ -0.37
BRAT1-204ENST00000469750 WDR86Q86TI4 376 aa12.72□□□□□ -0.37
BRAT1-204ENST00000469750 C14orf178Q8N769 122 aaPredicted RBP12.72□□□□□ -0.37
BRAT1-204ENST00000469750 IGLV1-44P01699 117 aa12.72□□□□□ -0.37
BRAT1-204ENST00000469750 LOXP28300 417 aaPredicted RBP12.72□□□□□ -0.37
BRAT1-204ENST00000469750 ZNF503-AS2A6NEH8 195 aa12.71□□□□□ -0.37
BRAT1-204ENST00000469750 NDUFA4L2Q9NRX3 87 aa12.71□□□□□ -0.37
BRAT1-204ENST00000469750 LINC00158P58513 81 aa12.71□□□□□ -0.37
BRAT1-204ENST00000469750 CD5LO43866 347 aa12.71□□□□□ -0.38
BRAT1-204ENST00000469750 NDUFB8O95169 186 aa12.71□□□□□ -0.38
BRAT1-204ENST00000469750 PIP4P1Q86T03 277 aa12.71□□□□□ -0.38
BRAT1-204ENST00000469750 ZNF524Q96C55 264 aa12.71□□□□□ -0.38
BRAT1-204ENST00000469750 ANAPC10Q9UM13 185 aa12.71□□□□□ -0.38
BRAT1-204ENST00000469750 IGHV4-39P01824 125 aa12.71□□□□□ -0.38
BRAT1-204ENST00000469750 NBL1P41271 181 aa12.71□□□□□ -0.38
BRAT1-204ENST00000469750 YPEL3P61236 119 aaPredicted RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 173.8 ms