RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 TRDV1A0A1B0GX56 115 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 TLCD2A6NGC4 264 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 ARL5CA6NH57 179 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 GABARAPH6UMI1 98 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 J3KT08 172 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 K7ERJ3 54 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 M0QZK8 103 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 NDUFA2O43678 99 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 UBL3O95164 117 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 BAALC-AS2P0C853 105 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 BCL2P10415 239 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 SDC4P31431 198 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 ZNF93P35789 620 aaPredicted RBP1.05□□□□□ -2.24
VPS8-220ENST00000469713 TMBIM6P55061 237 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 ARPP19P56211 112 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 RPS28P62857 69 aaKnown RBP1.05□□□□□ -2.24
VPS8-220ENST00000469713 PDE6HQ13956 83 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 SMIM21Q3B7S5 101 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 CCDC58Q4VC31 144 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 C1orf140Q5VVS0 124 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 SOSTDC1Q6X4U4 206 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 PDZD9Q8IXQ8 264 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 LRRC18Q8N456 261 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 TMEM229BQ8NBD8 167 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 OR8J3Q8NGG0 315 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 OR2T10Q8NGZ9 312 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 PPTC7Q8NI37 304 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 NAT8BQ9UHF3 227 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 MED31Q9Y3C7 131 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 C22orf24Q9Y442 160 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 ARHGEF28Q8N1W1 1705 aaKnown RBP1.05□□□□□ -2.24
VPS8-220ENST00000469713 NUP98P52948 1817 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 FER1L6Q2WGJ9 1857 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 BCL9O00512 1426 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 CD109Q6YHK3 1445 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 NCOR1O75376 2440 aa1.05□□□□□ -2.24
VPS8-220ENST00000469713 PEG3Q9GZU2 1588 aa1.04□□□□□ -2.24
VPS8-220ENST00000469713 CACNA1BQ00975 2339 aa1.04□□□□□ -2.24
VPS8-220ENST00000469713 TAF1LQ8IZX4 1826 aa1.04□□□□□ -2.24
VPS8-220ENST00000469713 C7orf71A4D174 169 aa1.04□□□□□ -2.24
VPS8-220ENST00000469713 LYZL6O75951 148 aa1.04□□□□□ -2.24
VPS8-220ENST00000469713 DYNLT3P51808 116 aa1.04□□□□□ -2.24
VPS8-220ENST00000469713 UBE2BP63146 152 aa1.04□□□□□ -2.24
VPS8-220ENST00000469713 EIF3IQ13347 325 aaKnown RBP1.04□□□□□ -2.24
VPS8-220ENST00000469713 DEFB115Q30KQ5 88 aa1.04□□□□□ -2.24
VPS8-220ENST00000469713 BCL2L15Q5TBC7 163 aa1.04□□□□□ -2.24
VPS8-220ENST00000469713 C22orf39Q6P5X5 142 aa1.04□□□□□ -2.24
VPS8-220ENST00000469713 PRR15Q8IV56 129 aa1.04□□□□□ -2.24
VPS8-220ENST00000469713 TEX29Q8N6K0 151 aa1.04□□□□□ -2.24
VPS8-220ENST00000469713 CANT1Q8WVQ1 401 aa1.04□□□□□ -2.24
VPS8-220ENST00000469713 TCEAL4Q96EI5 215 aa1.04□□□□□ -2.24
VPS8-220ENST00000469713 PFDN5Q99471 154 aa1.04□□□□□ -2.24
VPS8-220ENST00000469713 SLC25A21Q9BQT8 299 aaPredicted RBP1.04□□□□□ -2.24
VPS8-220ENST00000469713 PRADC1Q9BSG0 188 aa1.04□□□□□ -2.24
VPS8-220ENST00000469713 OR2H1Q9GZK4 316 aa1.04□□□□□ -2.24
VPS8-220ENST00000469713 TAF9BQ9HBM6 251 aa1.04□□□□□ -2.24
VPS8-220ENST00000469713 POPDC3Q9HBV1 291 aa1.04□□□□□ -2.24
VPS8-220ENST00000469713 HSPB8Q9UJY1 196 aa1.04□□□□□ -2.24
VPS8-220ENST00000469713 LAMTOR2Q9Y2Q5 125 aa1.04□□□□□ -2.24
VPS8-220ENST00000469713 EPG5Q9HCE0 2579 aa1.04□□□□□ -2.24
VPS8-220ENST00000469713 ANKRD17O75179 2603 aaKnown RBP1.04□□□□□ -2.24
VPS8-220ENST00000469713 HECTD1Q9ULT8 2610 aa1.04□□□□□ -2.24
VPS8-220ENST00000469713 CEP164Q9UPV0 1460 aa1.04□□□□□ -2.24
VPS8-220ENST00000469713 BICRAQ9NZM4 1560 aa1.04□□□□□ -2.24
VPS8-220ENST00000469713 ANKHD1Q8IWZ3 2542 aaKnown RBP1.03□□□□□ -2.24
VPS8-220ENST00000469713 A0A1B0GX51 115 aa1.03□□□□□ -2.24
VPS8-220ENST00000469713 TMEM189A5PLL7 270 aa1.03□□□□□ -2.24
VPS8-220ENST00000469713 C9JAW5 83 aa1.03□□□□□ -2.24
VPS8-220ENST00000469713 NDUFB3O43676 98 aa1.03□□□□□ -2.24
VPS8-220ENST00000469713 TNFSF15O95150 251 aa1.03□□□□□ -2.24
VPS8-220ENST00000469713 GADD45GO95257 159 aa1.03□□□□□ -2.24
VPS8-220ENST00000469713 MT-ND4LP03901 98 aa1.03□□□□□ -2.24
VPS8-220ENST00000469713 FABP2P12104 132 aa1.03□□□□□ -2.24
VPS8-220ENST00000469713 CMPK1P30085 196 aa1.03□□□□□ -2.24
VPS8-220ENST00000469713 GTF2A1P52655 376 aaPredicted RBP1.03□□□□□ -2.24
VPS8-220ENST00000469713 DYNLT1P63172 113 aa1.03□□□□□ -2.24
VPS8-220ENST00000469713 BRMS1LQ5PSV4 323 aa1.03□□□□□ -2.24
VPS8-220ENST00000469713 Q5XG85 94 aa1.03□□□□□ -2.24
VPS8-220ENST00000469713 CROCCP2Q86T23 111 aa1.03□□□□□ -2.24
VPS8-220ENST00000469713 Q8IYB0 196 aa1.03□□□□□ -2.24
VPS8-220ENST00000469713 FAM19A2Q8N3H0 131 aa1.03□□□□□ -2.24
VPS8-220ENST00000469713 ISOC1Q96CN7 298 aa1.03□□□□□ -2.24
VPS8-220ENST00000469713 YPEL2Q96QA6 119 aa1.03□□□□□ -2.24
VPS8-220ENST00000469713 NPCDR1Q9BY65 106 aa1.03□□□□□ -2.24
VPS8-220ENST00000469713 NIT2Q9NQR4 276 aa1.03□□□□□ -2.24
VPS8-220ENST00000469713 SPANXA1Q9NS26 97 aa1.03□□□□□ -2.24
VPS8-220ENST00000469713 LAMTOR3Q9UHA4 124 aa1.03□□□□□ -2.24
VPS8-220ENST00000469713 HIGD1AQ9Y241 93 aa1.03□□□□□ -2.24
VPS8-220ENST00000469713 RFX7Q2KHR2 1363 aa1.03□□□□□ -2.24
VPS8-220ENST00000469713 SOGA1O94964 1423 aa1.03□□□□□ -2.24
VPS8-220ENST00000469713 TNRC6BQ9UPQ9 1833 aaKnown RBP1.03□□□□□ -2.25
VPS8-220ENST00000469713 NCOA6Q14686 2063 aaPredicted RBP1.03□□□□□ -2.25
VPS8-220ENST00000469713 JMJD1CQ15652 2540 aa1.03□□□□□ -2.25
VPS8-220ENST00000469713 MYO18BQ8IUG5 2567 aa1.02□□□□□ -2.25
VPS8-220ENST00000469713 ITPR3Q14573 2671 aa1.02□□□□□ -2.25
VPS8-220ENST00000469713 ANKRD11Q6UB99 2663 aaPredicted RBP1.02□□□□□ -2.25
VPS8-220ENST00000469713 TNRC18O15417 2968 aaPredicted RBP1.02□□□□□ -2.25
VPS8-220ENST00000469713 LOC107984640A0A0U1RRK4 108 aa1.02□□□□□ -2.25
VPS8-220ENST00000469713 B4DSR2 109 aa1.02□□□□□ -2.25
VPS8-220ENST00000469713 GGCTO75223 188 aaKnown RBP1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms