RNA–Protein interactions for RNA: ENST00000469543.5

VIM-203, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 2,666 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-203ENST00000469543 DTX2Q86UW9 622 aa14.95□□□□□ -0.02
VIM-203ENST00000469543 C8orf49Q96NF6 230 aa14.95□□□□□ -0.02
VIM-203ENST00000469543 TPPP3Q9BW30 176 aa14.95□□□□□ -0.02
VIM-203ENST00000469543 BPESC1Q9GZL8 116 aa14.95□□□□□ -0.02
VIM-203ENST00000469543 A8MWL6 223 aa14.95□□□□□ -0.02
VIM-203ENST00000469543 COX19Q49B96 90 aa14.95□□□□□ -0.02
VIM-203ENST00000469543 OR4F17Q8NGA8 305 aa14.95□□□□□ -0.02
VIM-203ENST00000469543 VAMP8Q9BV40 100 aa14.95□□□□□ -0.02
VIM-203ENST00000469543 IGHV3OR16-10A0A075B7F0 116 aa14.94□□□□□ -0.02
VIM-203ENST00000469543 ZANQ9Y493 2812 aa14.94□□□□□ -0.02
VIM-203ENST00000469543 POLQO75417 2590 aa14.94□□□□□ -0.02
VIM-203ENST00000469543 IGHV7-81A0A0B4J1V7 117 aa14.94□□□□□ -0.02
VIM-203ENST00000469543 MUC21A0A0G2JKD1 596 aa14.94□□□□□ -0.02
VIM-203ENST00000469543 MUC21A0A140T8X8 626 aa14.94□□□□□ -0.02
VIM-203ENST00000469543 HBBP68871 147 aa14.94□□□□□ -0.02
VIM-203ENST00000469543 MUC21Q5SSG8 566 aa14.94□□□□□ -0.02
VIM-203ENST00000469543 C21orf62Q9NYP8 219 aa14.94□□□□□ -0.02
VIM-203ENST00000469543 WI2-2373I1.2A0A1W2PRP0 233 aa14.93□□□□□ -0.02
VIM-203ENST00000469543 HSBP1O75506 76 aa14.93□□□□□ -0.02
VIM-203ENST00000469543 TMUB1Q9BVT8 246 aa14.93□□□□□ -0.02
VIM-203ENST00000469543 ACACBO00763 2458 aa14.93□□□□□ -0.02
VIM-203ENST00000469543 HLA-DMBP28068 263 aa14.93□□□□□ -0.02
VIM-203ENST00000469543 AJUBAQ96IF1 538 aa14.93□□□□□ -0.02
VIM-203ENST00000469543 SIRPDQ9H106 197 aa14.93□□□□□ -0.02
VIM-203ENST00000469543 TMSB15BA0A087X1C1 80 aa14.92□□□□□ -0.02
VIM-203ENST00000469543 OVOL3O00110 214 aa14.92□□□□□ -0.02
VIM-203ENST00000469543 CTSGP08311 255 aa14.92□□□□□ -0.02
VIM-203ENST00000469543 MFAP4P55083 255 aa14.92□□□□□ -0.02
VIM-203ENST00000469543 EBLN2Q6P2I7 272 aa14.92□□□□□ -0.02
VIM-203ENST00000469543 Q8N6K4 173 aa14.92□□□□□ -0.02
VIM-203ENST00000469543 SRSF8Q9BRL6 282 aaKnown RBP14.92□□□□□ -0.02
VIM-203ENST00000469543 CSPG4Q6UVK1 2322 aa14.92□□□□□ -0.02
VIM-203ENST00000469543 IGHV3OR16-13A0A075B7E8 117 aa14.92□□□□□ -0.02
VIM-203ENST00000469543 IGHV3-74A0A0B4J1X5 117 aa14.92□□□□□ -0.02
VIM-203ENST00000469543 ECSCRQ19T08 205 aa14.92□□□□□ -0.02
VIM-203ENST00000469543 CLEC5AQ9NY25 188 aa14.92□□□□□ -0.02
VIM-203ENST00000469543 PSG8Q9UQ74 426 aa14.92□□□□□ -0.02
VIM-203ENST00000469543 USP9YO00507 2555 aaPredicted RBP14.92□□□□□ -0.02
VIM-203ENST00000469543 G3V318 75 aa14.91□□□□□ -0.02
VIM-203ENST00000469543 GNLYP22749 145 aa14.91□□□□□ -0.02
VIM-203ENST00000469543 RASL11AQ6T310 242 aa14.91□□□□□ -0.02
VIM-203ENST00000469543 Q8N9W7 124 aa14.91□□□□□ -0.02
VIM-203ENST00000469543 C2orf88Q9BSF0 95 aa14.91□□□□□ -0.02
VIM-203ENST00000469543 C1RLQ9NZP8 487 aa14.91□□□□□ -0.02
VIM-203ENST00000469543 IGHV3-66A0A0C4DH42 116 aa14.91□□□□□ -0.02
VIM-203ENST00000469543 SAA4P35542 130 aa14.91□□□□□ -0.02
VIM-203ENST00000469543 RBPMS2Q6ZRY4 209 aaKnown RBP14.91□□□□□ -0.02
VIM-203ENST00000469543 PIP4P2Q8N4L2 257 aa14.91□□□□□ -0.02
VIM-203ENST00000469543 TTC9CQ8N5M4 171 aa14.91□□□□□ -0.02
VIM-203ENST00000469543 IGKV2-40A0A087WW87 121 aaPredicted RBP14.9□□□□□ -0.02
VIM-203ENST00000469543 NPIPB5A8MRT5 1133 aa14.9□□□□□ -0.02
VIM-203ENST00000469543 M0R2Z0 102 aa14.9□□□□□ -0.02
VIM-203ENST00000469543 IGKV2D-40P01614 121 aaPredicted RBP14.9□□□□□ -0.02
VIM-203ENST00000469543 ARMS2P0C7Q2 107 aa14.9□□□□□ -0.02
VIM-203ENST00000469543 LINC00173Q6ZV60 143 aa14.9□□□□□ -0.02
VIM-203ENST00000469543 SPATA12Q7Z6I5 190 aa14.9□□□□□ -0.02
VIM-203ENST00000469543 SMIM12Q96EX1 92 aa14.9□□□□□ -0.02
VIM-203ENST00000469543 ZNF492Q9P255 531 aa14.9□□□□□ -0.02
VIM-203ENST00000469543 NPIPB6E9PJ23 425 aa14.89□□□□□ -0.03
VIM-203ENST00000469543 PSG3Q16557 428 aa14.89□□□□□ -0.03
VIM-203ENST00000469543 CCDC144NLQ6NUI1 221 aa14.89□□□□□ -0.03
VIM-203ENST00000469543 BORCS7Q96B45 105 aa14.89□□□□□ -0.03
VIM-203ENST00000469543 LINC00527Q9UJ94 153 aa14.89□□□□□ -0.03
VIM-203ENST00000469543 TIMM8BQ9Y5J9 83 aaPredicted RBP14.89□□□□□ -0.03
VIM-203ENST00000469543 Q8TAT8 98 aa14.89□□□□□ -0.03
VIM-203ENST00000469543 ITLN2Q8WWU7 325 aaPredicted RBP14.89□□□□□ -0.03
VIM-203ENST00000469543 MCRIP2Q9BUT9 160 aaKnown RBP14.89□□□□□ -0.03
VIM-203ENST00000469543 APOHP02749 345 aaPredicted RBP14.89□□□□□ -0.03
VIM-203ENST00000469543 CSN3P07498 182 aa14.89□□□□□ -0.03
VIM-203ENST00000469543 GPR183P32249 361 aa14.89□□□□□ -0.03
VIM-203ENST00000469543 BATFQ16520 125 aa14.89□□□□□ -0.03
VIM-203ENST00000469543 ATP5L2Q7Z4Y8 100 aa14.89□□□□□ -0.03
VIM-203ENST00000469543 FAM181BA6NEQ2 426 aa14.88□□□□□ -0.03
VIM-203ENST00000469543 LMO4P61968 165 aa14.88□□□□□ -0.03
VIM-203ENST00000469543 C15orf32Q32M92 178 aa14.88□□□□□ -0.03
VIM-203ENST00000469543 SPATA45Q537H7 98 aa14.88□□□□□ -0.03
VIM-203ENST00000469543 C1orf122Q6ZSJ8 110 aa14.88□□□□□ -0.03
VIM-203ENST00000469543 TMEM219Q86XT9 240 aa14.88□□□□□ -0.03
VIM-203ENST00000469543 MIEN1Q9BRT3 115 aa14.88□□□□□ -0.03
VIM-203ENST00000469543 SMAD5-AS1Q9Y6J3 95 aa14.88□□□□□ -0.03
VIM-203ENST00000469543 IGHV3-49A0A0A0MS15 119 aa14.88□□□□□ -0.03
VIM-203ENST00000469543 ATP6V0E1O15342 81 aa14.88□□□□□ -0.03
VIM-203ENST00000469543 C20orf144Q9BQM9 153 aa14.88□□□□□ -0.03
VIM-203ENST00000469543 CUBNO60494 3623 aa14.87□□□□□ -0.03
VIM-203ENST00000469543 CLEC3BP05452 202 aa14.87□□□□□ -0.03
VIM-203ENST00000469543 RAB4AP20338 218 aa14.87□□□□□ -0.03
VIM-203ENST00000469543 KLF5Q13887 457 aaPredicted RBP14.87□□□□□ -0.03
VIM-203ENST00000469543 TP73-AS1Q9UF72 201 aa14.87□□□□□ -0.03
VIM-203ENST00000469543 IGHV2-70DA0A0C4DH43 119 aa14.87□□□□□ -0.03
VIM-203ENST00000469543 CHEK1O14757 476 aa14.87□□□□□ -0.03
VIM-203ENST00000469543 UNQ5815/PRO19632Q6UWF5 114 aa14.87□□□□□ -0.03
VIM-203ENST00000469543 SOX21Q9Y651 276 aaPredicted RBP14.87□□□□□ -0.03
VIM-203ENST00000469543 M0R143 59 aa14.86□□□□□ -0.03
VIM-203ENST00000469543 EFNA4P52798 201 aa14.86□□□□□ -0.03
VIM-203ENST00000469543 EBI3Q14213 229 aa14.86□□□□□ -0.03
VIM-203ENST00000469543 CT83Q5H943 113 aa14.86□□□□□ -0.03
VIM-203ENST00000469543 FAM106CPP0CH98 169 aa14.86□□□□□ -0.03
VIM-203ENST00000469543 CTRLP40313 264 aa14.86□□□□□ -0.03
VIM-203ENST00000469543 TMEM75Q8N9X5 138 aa14.86□□□□□ -0.03
VIM-203ENST00000469543 VGLL1Q99990 258 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms