RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 AMN1Q8IY45 258 aa7.16□□□□□ -1.26
SMARCE1-207ENST00000469334 FOXC2Q99958 501 aa7.16□□□□□ -1.26
SMARCE1-207ENST00000469334 SPXQ9BT56 116 aa7.16□□□□□ -1.26
SMARCE1-207ENST00000469334 OBP2BQ9NPH6 170 aa7.16□□□□□ -1.26
SMARCE1-207ENST00000469334 CALYQ9NYX4 217 aa7.16□□□□□ -1.26
SMARCE1-207ENST00000469334 CCDC179H3BU77 68 aa7.16□□□□□ -1.26
SMARCE1-207ENST00000469334 PLAUP00749 431 aa7.16□□□□□ -1.26
SMARCE1-207ENST00000469334 PRDX2P32119 198 aa7.16□□□□□ -1.26
SMARCE1-207ENST00000469334 MZT1Q08AG7 82 aa7.16□□□□□ -1.26
SMARCE1-207ENST00000469334 ZNF826PQ6ZT77 177 aa7.16□□□□□ -1.26
SMARCE1-207ENST00000469334 GOLT1AQ6ZVE7 132 aa7.16□□□□□ -1.26
SMARCE1-207ENST00000469334 CD177Q8N6Q3 437 aa7.16□□□□□ -1.26
SMARCE1-207ENST00000469334 KNL1Q8NG31 2342 aa7.16□□□□□ -1.26
SMARCE1-207ENST00000469334 ASXL3Q9C0F0 2248 aa7.15□□□□□ -1.26
SMARCE1-207ENST00000469334 HEATR1Q9H583 2144 aaKnown RBP7.15□□□□□ -1.26
SMARCE1-207ENST00000469334 RFPL3SP0C7P2 107 aa7.15□□□□□ -1.26
SMARCE1-207ENST00000469334 SAA1P0DJI8 122 aaPredicted RBP7.15□□□□□ -1.26
SMARCE1-207ENST00000469334 LEPP41159 167 aa7.15□□□□□ -1.26
SMARCE1-207ENST00000469334 PSMB2P49721 201 aa7.15□□□□□ -1.26
SMARCE1-207ENST00000469334 C1orf229Q6ZS94 237 aaPredicted RBP7.15□□□□□ -1.26
SMARCE1-207ENST00000469334 MAPKAPK5-AS1Q8N8E1 139 aa7.15□□□□□ -1.26
SMARCE1-207ENST00000469334 FLYWCH2Q96CP2 140 aaKnown RBP7.15□□□□□ -1.26
SMARCE1-207ENST00000469334 CGB3P0DN86 165 aa7.15□□□□□ -1.27
SMARCE1-207ENST00000469334 CGB7P0DN87 165 aa7.15□□□□□ -1.27
SMARCE1-207ENST00000469334 CCL5P13501 91 aa7.15□□□□□ -1.27
SMARCE1-207ENST00000469334 TNFRSF1AP19438 455 aa7.15□□□□□ -1.27
SMARCE1-207ENST00000469334 ORM2P19652 201 aa7.15□□□□□ -1.27
SMARCE1-207ENST00000469334 UBE2D1P51668 147 aa7.15□□□□□ -1.27
SMARCE1-207ENST00000469334 FXYD7P58549 80 aa7.15□□□□□ -1.27
SMARCE1-207ENST00000469334 LYZL1Q6UWQ5 148 aa7.15□□□□□ -1.27
SMARCE1-207ENST00000469334 PPP1R27Q86WC6 154 aa7.15□□□□□ -1.27
SMARCE1-207ENST00000469334 LYPD1Q8N2G4 141 aa7.15□□□□□ -1.27
SMARCE1-207ENST00000469334 RAB1BQ9H0U4 201 aa7.15□□□□□ -1.27
SMARCE1-207ENST00000469334 ZNF71Q9NQZ8 489 aaPredicted RBP7.15□□□□□ -1.27
SMARCE1-207ENST00000469334 VPREB3Q9UKI3 123 aa7.15□□□□□ -1.27
SMARCE1-207ENST00000469334 RANBP2P49792 3224 aaKnown RBP7.14□□□□□ -1.27
SMARCE1-207ENST00000469334 DSCAML1Q8TD84 2053 aa7.14□□□□□ -1.27
SMARCE1-207ENST00000469334 TRAV8-1A0A0A6YYK1 113 aa7.14□□□□□ -1.27
SMARCE1-207ENST00000469334 IGHV1OR15-9A0A0B4J2B8 117 aa7.14□□□□□ -1.27
SMARCE1-207ENST00000469334 TMEM213A2RRL7 107 aa7.14□□□□□ -1.27
SMARCE1-207ENST00000469334 ALKBH6Q3KRA9 238 aa7.14□□□□□ -1.27
SMARCE1-207ENST00000469334 OR11H6Q8NGC7 330 aa7.14□□□□□ -1.27
SMARCE1-207ENST00000469334 RASL11BQ9BPW5 248 aa7.14□□□□□ -1.27
SMARCE1-207ENST00000469334 ASCC3Q8N3C0 2202 aaKnown RBP7.14□□□□□ -1.27
SMARCE1-207ENST00000469334 CNTRLQ7Z7A1 2325 aa7.14□□□□□ -1.27
SMARCE1-207ENST00000469334 IGHV3-64DA0A0J9YX35 117 aa7.13□□□□□ -1.27
SMARCE1-207ENST00000469334 K7EMI3 77 aa7.13□□□□□ -1.27
SMARCE1-207ENST00000469334 TFF1P04155 84 aa7.13□□□□□ -1.27
SMARCE1-207ENST00000469334 MRPL23Q16540 153 aaKnown RBP7.13□□□□□ -1.27
SMARCE1-207ENST00000469334 CXorf67Q86X51 503 aaPredicted RBP7.13□□□□□ -1.27
SMARCE1-207ENST00000469334 ANKRD29Q8N6D5 301 aa7.13□□□□□ -1.27
SMARCE1-207ENST00000469334 OR10J6PQ8NGY7 276 aa7.13□□□□□ -1.27
SMARCE1-207ENST00000469334 TPPP3Q9BW30 176 aa7.13□□□□□ -1.27
SMARCE1-207ENST00000469334 MDFICQ9P1T7 246 aa7.13□□□□□ -1.27
SMARCE1-207ENST00000469334 HIGD1AQ9Y241 93 aa7.13□□□□□ -1.27
SMARCE1-207ENST00000469334 WFDC3Q8IUB2 231 aa7.13□□□□□ -1.27
SMARCE1-207ENST00000469334 OR4C13Q8NGP0 309 aa7.13□□□□□ -1.27
SMARCE1-207ENST00000469334 TMEM167AQ8TBQ9 72 aa7.13□□□□□ -1.27
SMARCE1-207ENST00000469334 FAM173AQ9BQD7 235 aa7.13□□□□□ -1.27
SMARCE1-207ENST00000469334 CRISPLD2Q9H0B8 497 aa7.13□□□□□ -1.27
SMARCE1-207ENST00000469334 TMEM160Q9NX00 188 aa7.13□□□□□ -1.27
SMARCE1-207ENST00000469334 BRWD1Q9NSI6 2320 aa7.13□□□□□ -1.27
SMARCE1-207ENST00000469334 TRAV12-1A0A0B4J245 112 aa7.12□□□□□ -1.27
SMARCE1-207ENST00000469334 TRAV40A0A0B4J280 105 aa7.12□□□□□ -1.27
SMARCE1-207ENST00000469334 LOC107984156A0A0G2JMH3 177 aa7.12□□□□□ -1.27
SMARCE1-207ENST00000469334 LINC01549A6NIU2 74 aa7.12□□□□□ -1.27
SMARCE1-207ENST00000469334 SCGB1C2P0DMR2 95 aa7.12□□□□□ -1.27
SMARCE1-207ENST00000469334 C17orf58Q2M2W7 97 aa7.12□□□□□ -1.27
SMARCE1-207ENST00000469334 C5orf47Q569G3 176 aa7.12□□□□□ -1.27
SMARCE1-207ENST00000469334 PVRIGQ6DKI7 326 aa7.12□□□□□ -1.27
SMARCE1-207ENST00000469334 ARL17AQ8IVW1 177 aa7.12□□□□□ -1.27
SMARCE1-207ENST00000469334 Q8N8P6 123 aa7.12□□□□□ -1.27
SMARCE1-207ENST00000469334 KLF14Q8TD94 323 aaPredicted RBP7.12□□□□□ -1.27
SMARCE1-207ENST00000469334 AJUBAQ96IF1 538 aa7.12□□□□□ -1.27
SMARCE1-207ENST00000469334 MRPL35Q9NZE8 188 aaKnown RBP7.12□□□□□ -1.27
SMARCE1-207ENST00000469334 KNTC1P50748 2209 aa7.12□□□□□ -1.27
SMARCE1-207ENST00000469334 SRRM5B3KS81 715 aa7.12□□□□□ -1.27
SMARCE1-207ENST00000469334 PRTN3P24158 256 aa7.12□□□□□ -1.27
SMARCE1-207ENST00000469334 SRSF2Q01130 221 aaKnown RBP7.12□□□□□ -1.27
SMARCE1-207ENST00000469334 PLGLAQ15195 96 aa7.12□□□□□ -1.27
SMARCE1-207ENST00000469334 TMEM240Q5SV17 173 aa7.12□□□□□ -1.27
SMARCE1-207ENST00000469334 COX8CQ7Z4L0 72 aa7.12□□□□□ -1.27
SMARCE1-207ENST00000469334 MYOZ3Q8TDC0 251 aa7.12□□□□□ -1.27
SMARCE1-207ENST00000469334 PTH2Q96A98 100 aa7.12□□□□□ -1.27
SMARCE1-207ENST00000469334 KIR2DL4Q99706 377 aa7.12□□□□□ -1.27
SMARCE1-207ENST00000469334 TNCP24821 2201 aa7.11□□□□□ -1.27
SMARCE1-207ENST00000469334 IGKV1D-17A0A075B6S4 117 aa7.11□□□□□ -1.27
SMARCE1-207ENST00000469334 A0A1W2PPI3 338 aa7.11□□□□□ -1.27
SMARCE1-207ENST00000469334 IGHV3-13P01766 116 aa7.11□□□□□ -1.27
SMARCE1-207ENST00000469334 IGKV1-16P04430 117 aa7.11□□□□□ -1.27
SMARCE1-207ENST00000469334 CRIP1P50238 77 aa7.11□□□□□ -1.27
SMARCE1-207ENST00000469334 WT1-ASQ06250 92 aa7.11□□□□□ -1.27
SMARCE1-207ENST00000469334 LY6DQ14210 128 aa7.11□□□□□ -1.27
SMARCE1-207ENST00000469334 SPRNQ5BIV9 151 aa7.11□□□□□ -1.27
SMARCE1-207ENST00000469334 FAM159AQ6UWV7 190 aa7.11□□□□□ -1.27
SMARCE1-207ENST00000469334 LINC01600Q96MT4 127 aa7.11□□□□□ -1.27
SMARCE1-207ENST00000469334 K7EM74 188 aa7.1□□□□□ -1.27
SMARCE1-207ENST00000469334 TCL1BO95988 128 aa7.1□□□□□ -1.27
SMARCE1-207ENST00000469334 HES3Q5TGS1 186 aa7.1□□□□□ -1.27
SMARCE1-207ENST00000469334 NRGNQ92686 78 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms