RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 ARL6Q9H0F7 186 aa8.53□□□□□ -1.04
HDAC3-204ENST00000469207 PPP1R14DQ9NXH3 145 aa8.53□□□□□ -1.04
HDAC3-204ENST00000469207 PSENENQ9NZ42 101 aa8.53□□□□□ -1.04
HDAC3-204ENST00000469207 PRAC2D3DTV9 90 aa8.52□□□□□ -1.05
HDAC3-204ENST00000469207 H3BMQ9 156 aa8.52□□□□□ -1.05
HDAC3-204ENST00000469207 MRPS12O15235 138 aaKnown RBP8.52□□□□□ -1.05
HDAC3-204ENST00000469207 RPL7P18124 248 aaKnown RBP8.52□□□□□ -1.05
HDAC3-204ENST00000469207 FAUP35544 74 aaKnown RBP8.52□□□□□ -1.05
HDAC3-204ENST00000469207 TAS2R60P59551 318 aa8.52□□□□□ -1.05
HDAC3-204ENST00000469207 KRTAP10-2P60368 255 aa8.52□□□□□ -1.05
HDAC3-204ENST00000469207 B2MP61769 119 aa8.52□□□□□ -1.05
HDAC3-204ENST00000469207 DLK1P80370 383 aa8.52□□□□□ -1.05
HDAC3-204ENST00000469207 CLINT1Q14677 625 aa8.52□□□□□ -1.05
HDAC3-204ENST00000469207 LRRC20Q8TCA0 184 aa8.52□□□□□ -1.05
HDAC3-204ENST00000469207 RPUSD4Q96CM3 377 aaKnown RBP8.52□□□□□ -1.05
HDAC3-204ENST00000469207 TIMM8BQ9Y5J9 83 aaPredicted RBP8.52□□□□□ -1.05
HDAC3-204ENST00000469207 V9GYH0 126 aa8.52□□□□□ -1.05
HDAC3-204ENST00000469207 TRAV26-1A0A087WT03 109 aa8.51□□□□□ -1.05
HDAC3-204ENST00000469207 J3KRW8 73 aa8.51□□□□□ -1.05
HDAC3-204ENST00000469207 SSSCA1O60232 199 aa8.51□□□□□ -1.05
HDAC3-204ENST00000469207 METTL15P1P0C7V9 234 aa8.51□□□□□ -1.05
HDAC3-204ENST00000469207 ANXA7P20073 488 aaKnown RBP8.51□□□□□ -1.05
HDAC3-204ENST00000469207 HOXA5P20719 270 aa8.51□□□□□ -1.05
HDAC3-204ENST00000469207 PLP1P60201 277 aa8.51□□□□□ -1.05
HDAC3-204ENST00000469207 SLC38A11Q08AI6 406 aa8.51□□□□□ -1.05
HDAC3-204ENST00000469207 ESRGQ1W209 222 aa8.51□□□□□ -1.05
HDAC3-204ENST00000469207 RNASE8Q8TDE3 154 aaKnown RBP8.51□□□□□ -1.05
HDAC3-204ENST00000469207 C16orf74Q96GX8 76 aa8.51□□□□□ -1.05
HDAC3-204ENST00000469207 FLVCR2Q9UPI3 526 aa8.51□□□□□ -1.05
HDAC3-204ENST00000469207 A0A087X0K7 114 aa8.5□□□□□ -1.05
HDAC3-204ENST00000469207 GAGE12BA1L429 117 aa8.5□□□□□ -1.05
HDAC3-204ENST00000469207 C9orf170A2RU37 121 aa8.5□□□□□ -1.05
HDAC3-204ENST00000469207 GAGE7O76087 117 aa8.5□□□□□ -1.05
HDAC3-204ENST00000469207 GAGE12FP0CL80 117 aa8.5□□□□□ -1.05
HDAC3-204ENST00000469207 GAGE12GP0CL81 117 aa8.5□□□□□ -1.05
HDAC3-204ENST00000469207 GAGE12IP0CL82 117 aa8.5□□□□□ -1.05
HDAC3-204ENST00000469207 FUSP35637 526 aaKnown RBP eCLIP8.5□□□□□ -1.05
HDAC3-204ENST00000469207 CDKN1BP46527 198 aa8.5□□□□□ -1.05
HDAC3-204ENST00000469207 ARL16Q0P5N6 197 aa8.5□□□□□ -1.05
HDAC3-204ENST00000469207 MORN5Q5VZ52 161 aa8.5□□□□□ -1.05
HDAC3-204ENST00000469207 Q8N1X5 172 aa8.5□□□□□ -1.05
HDAC3-204ENST00000469207 TMEM256Q8N2U0 113 aa8.5□□□□□ -1.05
HDAC3-204ENST00000469207 GNPNAT1Q96EK6 184 aaPredicted RBP8.5□□□□□ -1.05
HDAC3-204ENST00000469207 SLC25A21Q9BQT8 299 aaPredicted RBP8.5□□□□□ -1.05
HDAC3-204ENST00000469207 ARV1Q9H2C2 271 aa8.5□□□□□ -1.05
HDAC3-204ENST00000469207 SCRT2Q9NQ03 307 aa8.5□□□□□ -1.05
HDAC3-204ENST00000469207 PIGBOS1A0A0B4J2F0 54 aa8.49□□□□□ -1.05
HDAC3-204ENST00000469207 ZNF701M0R085 212 aaPredicted RBP8.49□□□□□ -1.05
HDAC3-204ENST00000469207 SLC17A3O00476 420 aa8.49□□□□□ -1.05
HDAC3-204ENST00000469207 AP3S2P59780 193 aa8.49□□□□□ -1.05
HDAC3-204ENST00000469207 ZBTB8BQ8NAP8 495 aaPredicted RBP8.49□□□□□ -1.05
HDAC3-204ENST00000469207 TMEM263Q8WUH6 116 aaKnown RBP8.49□□□□□ -1.05
HDAC3-204ENST00000469207 SMIM8Q96KF7 97 aa8.49□□□□□ -1.05
HDAC3-204ENST00000469207 NPVFQ9HCQ7 196 aa8.49□□□□□ -1.05
HDAC3-204ENST00000469207 ZNF331Q9NQX6 463 aaPredicted RBP8.49□□□□□ -1.05
HDAC3-204ENST00000469207 SCGB1D2O95969 90 aa8.48□□□□□ -1.05
HDAC3-204ENST00000469207 S100A7P31151 101 aa8.48□□□□□ -1.05
HDAC3-204ENST00000469207 GFI1BQ5VTD9 330 aa8.48□□□□□ -1.05
HDAC3-204ENST00000469207 TMEM14EPQ6UXP3 125 aa8.48□□□□□ -1.05
HDAC3-204ENST00000469207 ZNF493Q6ZR52 646 aa8.48□□□□□ -1.05
HDAC3-204ENST00000469207 LINC00305Q7Z4B0 112 aa8.48□□□□□ -1.05
HDAC3-204ENST00000469207 CCDC190Q86UF4 302 aa8.48□□□□□ -1.05
HDAC3-204ENST00000469207 LINC00612Q8N6U2 182 aa8.48□□□□□ -1.05
HDAC3-204ENST00000469207 RXFP4Q8TDU9 374 aa8.48□□□□□ -1.05
HDAC3-204ENST00000469207 TMEM37Q8WXS4 190 aa8.48□□□□□ -1.05
HDAC3-204ENST00000469207 BCL7BQ9BQE9 202 aa8.48□□□□□ -1.05
HDAC3-204ENST00000469207 HERC1Q15751 4861 aa8.48□□□□□ -1.05
HDAC3-204ENST00000469207 TRAV5A0A0B4J249 113 aa8.47□□□□□ -1.05
HDAC3-204ENST00000469207 LINC00854A0A1B0GVQ3 168 aa8.47□□□□□ -1.05
HDAC3-204ENST00000469207 H3BQ15 152 aa8.47□□□□□ -1.05
HDAC3-204ENST00000469207 H7BYZ3 331 aa8.47□□□□□ -1.05
HDAC3-204ENST00000469207 CT45A10P0DMU9 189 aa8.47□□□□□ -1.05
HDAC3-204ENST00000469207 M6PRP20645 277 aa8.47□□□□□ -1.05
HDAC3-204ENST00000469207 UBE2MP61081 183 aaKnown RBP8.47□□□□□ -1.05
HDAC3-204ENST00000469207 SELENOTP62341 195 aa8.47□□□□□ -1.05
HDAC3-204ENST00000469207 ZNF586Q9NXT0 402 aa8.47□□□□□ -1.05
HDAC3-204ENST00000469207 FAT1Q14517 4588 aa8.46□□□□□ -1.05
HDAC3-204ENST00000469207 TRAV12-3A0A0B4J271 114 aa8.46□□□□□ -1.06
HDAC3-204ENST00000469207 GOSR2O14653 212 aa8.46□□□□□ -1.06
HDAC3-204ENST00000469207 AGPAT2O15120 278 aa8.46□□□□□ -1.06
HDAC3-204ENST00000469207 BAK1Q16611 211 aa8.46□□□□□ -1.06
HDAC3-204ENST00000469207 TEPPQ6URK8 271 aa8.46□□□□□ -1.06
HDAC3-204ENST00000469207 Q6ZTI0 123 aa8.46□□□□□ -1.06
HDAC3-204ENST00000469207 OR10P1Q8NGE3 313 aa8.46□□□□□ -1.06
HDAC3-204ENST00000469207 ZNF431Q8TF32 576 aaPredicted RBP8.46□□□□□ -1.06
HDAC3-204ENST00000469207 Q9H3A6 140 aa8.46□□□□□ -1.06
HDAC3-204ENST00000469207 TMPRSS5Q9H3S3 457 aa8.46□□□□□ -1.06
HDAC3-204ENST00000469207 GSKIPQ9P0R6 139 aa8.46□□□□□ -1.06
HDAC3-204ENST00000469207 TNFRSF18Q9Y5U5 241 aa8.46□□□□□ -1.06
HDAC3-204ENST00000469207 NOL3O60936 208 aaKnown RBP8.45□□□□□ -1.06
HDAC3-204ENST00000469207 RLN2P04090 185 aa8.45□□□□□ -1.06
HDAC3-204ENST00000469207 OR4E1P0C645 316 aa8.45□□□□□ -1.06
HDAC3-204ENST00000469207 OPCMLQ14982 345 aa8.45□□□□□ -1.06
HDAC3-204ENST00000469207 LCN15Q6UWW0 184 aa8.45□□□□□ -1.06
HDAC3-204ENST00000469207 CCDC28AQ8IWP9 274 aa8.45□□□□□ -1.06
HDAC3-204ENST00000469207 OR10J6PQ8NGY7 276 aa8.45□□□□□ -1.06
HDAC3-204ENST00000469207 SAT2Q96F10 170 aaPredicted RBP8.45□□□□□ -1.06
HDAC3-204ENST00000469207 VSIG2Q96IQ7 327 aa8.45□□□□□ -1.06
HDAC3-204ENST00000469207 MGST2Q99735 147 aa8.45□□□□□ -1.06
HDAC3-204ENST00000469207 MGAT4CQ9UBM8 478 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms