RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 TCEAL4Q96EI5 215 aa2.07□□□□□ -2.08
LSM5-209ENST00000468872 BTF3L4Q96K17 158 aa2.07□□□□□ -2.08
LSM5-209ENST00000468872 DNAJC30Q96LL9 226 aa2.07□□□□□ -2.08
LSM5-209ENST00000468872 KIFC1Q9BW19 673 aa2.07□□□□□ -2.08
LSM5-209ENST00000468872 ZNF471Q9BX82 626 aaPredicted RBP2.07□□□□□ -2.08
LSM5-209ENST00000468872 ULBP3Q9BZM4 244 aa2.07□□□□□ -2.08
LSM5-209ENST00000468872 PCBD2Q9H0N5 130 aa2.07□□□□□ -2.08
LSM5-209ENST00000468872 UQCC1Q9NVA1 299 aa2.07□□□□□ -2.08
LSM5-209ENST00000468872 OPTCQ9UBM4 332 aa2.07□□□□□ -2.08
LSM5-209ENST00000468872 DNAH10Q8IVF4 4471 aa2.07□□□□□ -2.08
LSM5-209ENST00000468872 CACNA1CQ13936 2221 aa2.06□□□□□ -2.08
LSM5-209ENST00000468872 PDCD11Q14690 1871 aaKnown RBP2.06□□□□□ -2.08
LSM5-209ENST00000468872 C11orf86A6NJI1 115 aa2.06□□□□□ -2.08
LSM5-209ENST00000468872 FNDC10F2Z333 226 aa2.06□□□□□ -2.08
LSM5-209ENST00000468872 UBE2L6O14933 153 aa2.06□□□□□ -2.08
LSM5-209ENST00000468872 PLA2G10O15496 165 aa2.06□□□□□ -2.08
LSM5-209ENST00000468872 S1PR2O95136 353 aa2.06□□□□□ -2.08
LSM5-209ENST00000468872 TAS2R41P59536 307 aa2.06□□□□□ -2.08
LSM5-209ENST00000468872 HSPE1P61604 102 aaKnown RBP2.06□□□□□ -2.08
LSM5-209ENST00000468872 GNG3P63215 75 aa2.06□□□□□ -2.08
LSM5-209ENST00000468872 DEFB113Q30KQ7 82 aa2.06□□□□□ -2.08
LSM5-209ENST00000468872 C12orf74Q32Q52 190 aa2.06□□□□□ -2.08
LSM5-209ENST00000468872 SPATA12Q7Z6I5 190 aa2.06□□□□□ -2.08
LSM5-209ENST00000468872 OOSP2Q86WS3 158 aa2.06□□□□□ -2.08
LSM5-209ENST00000468872 TEX47Q8TBZ9 253 aa2.06□□□□□ -2.08
LSM5-209ENST00000468872 RPS4Y2Q8TD47 263 aa2.06□□□□□ -2.08
LSM5-209ENST00000468872 TMEM147Q9BVK8 224 aa2.06□□□□□ -2.08
LSM5-209ENST00000468872 TTTY12Q9BZ98 90 aa2.06□□□□□ -2.08
LSM5-209ENST00000468872 TMEM222Q9H0R3 208 aa2.06□□□□□ -2.08
LSM5-209ENST00000468872 CENPHQ9H3R5 247 aa2.06□□□□□ -2.08
LSM5-209ENST00000468872 GPR84Q9NQS5 396 aa2.06□□□□□ -2.08
LSM5-209ENST00000468872 CISHQ9NSE2 258 aa2.06□□□□□ -2.08
LSM5-209ENST00000468872 PTPRDP23468 1912 aa2.06□□□□□ -2.08
LSM5-209ENST00000468872 TRPM6Q9BX84 2022 aa2.06□□□□□ -2.08
LSM5-209ENST00000468872 FAT2Q9NYQ8 4349 aa2.06□□□□□ -2.08
LSM5-209ENST00000468872 SSPOA2VEC9 5147 aa2.05□□□□□ -2.08
LSM5-209ENST00000468872 DOCK5Q9H7D0 1870 aa2.05□□□□□ -2.08
LSM5-209ENST00000468872 DNAH7Q8WXX0 4024 aa2.05□□□□□ -2.08
LSM5-209ENST00000468872 DSCAMO60469 2012 aa2.05□□□□□ -2.08
LSM5-209ENST00000468872 IGKV1D-43A0A0B4J1Z2 117 aa2.05□□□□□ -2.08
LSM5-209ENST00000468872 A0A0J9YY10 115 aa2.05□□□□□ -2.08
LSM5-209ENST00000468872 A0A1B0GX78 115 aa2.05□□□□□ -2.08
LSM5-209ENST00000468872 LY6LH3BQJ8 138 aa2.05□□□□□ -2.08
LSM5-209ENST00000468872 GNRH2O43555 120 aa2.05□□□□□ -2.08
LSM5-209ENST00000468872 ZNF682O95780 498 aa2.05□□□□□ -2.08
LSM5-209ENST00000468872 IFNA1P01562 189 aa2.05□□□□□ -2.08
LSM5-209ENST00000468872 SMIM10L2AP0DMW4 78 aa2.05□□□□□ -2.08
LSM5-209ENST00000468872 SMIM10L2BP0DMW5 78 aa2.05□□□□□ -2.08
LSM5-209ENST00000468872 KRTAP12-1P59990 96 aa2.05□□□□□ -2.08
LSM5-209ENST00000468872 TRIQKQ629K1 86 aa2.05□□□□□ -2.08
LSM5-209ENST00000468872 ANKRD29Q8N6D5 301 aa2.05□□□□□ -2.08
LSM5-209ENST00000468872 OR11H6Q8NGC7 330 aa2.05□□□□□ -2.08
LSM5-209ENST00000468872 MCFD2Q8NI22 146 aa2.05□□□□□ -2.08
LSM5-209ENST00000468872 GINS3Q9BRX5 216 aa2.05□□□□□ -2.08
LSM5-209ENST00000468872 CXCL16Q9H2A7 254 aa2.05□□□□□ -2.08
LSM5-209ENST00000468872 TP73-AS1Q9UF72 201 aa2.05□□□□□ -2.08
LSM5-209ENST00000468872 RSL24D1Q9UHA3 163 aaKnown RBP2.05□□□□□ -2.08
LSM5-209ENST00000468872 UTP11Q9Y3A2 253 aaKnown RBP2.05□□□□□ -2.08
LSM5-209ENST00000468872 UFC1Q9Y3C8 167 aa2.05□□□□□ -2.08
LSM5-209ENST00000468872 A0A087WUU8 490 aa2.04□□□□□ -2.08
LSM5-209ENST00000468872 TMEM235A6NFC5 223 aa2.04□□□□□ -2.08
LSM5-209ENST00000468872 ATG12O94817 140 aa2.04□□□□□ -2.08
LSM5-209ENST00000468872 NDUFB2O95178 105 aa2.04□□□□□ -2.08
LSM5-209ENST00000468872 SERPINA7P05543 415 aa2.04□□□□□ -2.08
LSM5-209ENST00000468872 SULT1A3P0DMM9 295 aa2.04□□□□□ -2.08
LSM5-209ENST00000468872 SULT1A4P0DMN0 295 aa2.04□□□□□ -2.08
LSM5-209ENST00000468872 CCR2P41597 374 aa2.04□□□□□ -2.08
LSM5-209ENST00000468872 TBPL1P62380 186 aa2.04□□□□□ -2.08
LSM5-209ENST00000468872 ALX1Q15699 326 aa2.04□□□□□ -2.08
LSM5-209ENST00000468872 Q6ZS49 121 aa2.04□□□□□ -2.08
LSM5-209ENST00000468872 SMIM15Q7Z3B0 74 aa2.04□□□□□ -2.08
LSM5-209ENST00000468872 TBC1D19Q8N5T2 526 aa2.04□□□□□ -2.08
LSM5-209ENST00000468872 GDPD1Q8N9F7 314 aa2.04□□□□□ -2.08
LSM5-209ENST00000468872 OR13C8Q8NGS7 320 aa2.04□□□□□ -2.08
LSM5-209ENST00000468872 CT55Q8WUE5 264 aa2.04□□□□□ -2.08
LSM5-209ENST00000468872 TXNDC17Q9BRA2 123 aa2.04□□□□□ -2.08
LSM5-209ENST00000468872 DDA1Q9BW61 102 aa2.04□□□□□ -2.08
LSM5-209ENST00000468872 PRTFDC1Q9NRG1 225 aa2.04□□□□□ -2.08
LSM5-209ENST00000468872 TMEM106BQ9NUM4 274 aa2.04□□□□□ -2.08
LSM5-209ENST00000468872 SS18L2Q9UHA2 77 aa2.04□□□□□ -2.08
LSM5-209ENST00000468872 AK3Q9UIJ7 227 aa2.04□□□□□ -2.08
LSM5-209ENST00000468872 HUWE1Q7Z6Z7 4374 aaKnown RBP2.04□□□□□ -2.08
LSM5-209ENST00000468872 RP1P56715 2156 aa2.03□□□□□ -2.08
LSM5-209ENST00000468872 TNRC6AQ8NDV7 1962 aaKnown RBP2.03□□□□□ -2.08
LSM5-209ENST00000468872 DLG5Q8TDM6 1919 aa2.03□□□□□ -2.08
LSM5-209ENST00000468872 DYNC1H1Q14204 4646 aaKnown RBP2.03□□□□□ -2.08
LSM5-209ENST00000468872 GNG14A0A1W2PPG7 69 aa2.03□□□□□ -2.08
LSM5-209ENST00000468872 SIGLEC16A6NMB1 481 aa2.03□□□□□ -2.08
LSM5-209ENST00000468872 MFSD11O43934 449 aa2.03□□□□□ -2.08
LSM5-209ENST00000468872 SERPINE1P05121 402 aa2.03□□□□□ -2.08
LSM5-209ENST00000468872 ZNF728P0DKX0 622 aa2.03□□□□□ -2.08
LSM5-209ENST00000468872 XCL1P47992 114 aa2.03□□□□□ -2.08
LSM5-209ENST00000468872 RBM11P57052 281 aaKnown RBP2.03□□□□□ -2.08
LSM5-209ENST00000468872 TAS2R30P59541 319 aa2.03□□□□□ -2.08
LSM5-209ENST00000468872 CAV1Q03135 178 aa2.03□□□□□ -2.08
LSM5-209ENST00000468872 MOGQ16653 247 aa2.03□□□□□ -2.08
LSM5-209ENST00000468872 ARHGAP11BQ3KRB8 267 aa2.03□□□□□ -2.08
LSM5-209ENST00000468872 GOLT1AQ6ZVE7 132 aa2.03□□□□□ -2.08
LSM5-209ENST00000468872 CLDND2Q8NHS1 167 aa2.03□□□□□ -2.08
LSM5-209ENST00000468872 RASSF5Q8WWW0 418 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms