RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 TTC9CQ8N5M4 171 aa2.29□□□□□ -2.04
VPS50-209ENST00000467326 FAM216BQ8N7L0 139 aa2.29□□□□□ -2.04
VPS50-209ENST00000467326 PSMF1Q92530 271 aa2.29□□□□□ -2.04
VPS50-209ENST00000467326 FGF13Q92913 245 aa2.29□□□□□ -2.04
VPS50-209ENST00000467326 DIRC1Q969H9 104 aa2.29□□□□□ -2.04
VPS50-209ENST00000467326 IMMP2LQ96T52 175 aa2.29□□□□□ -2.04
VPS50-209ENST00000467326 NAA60Q9H7X0 242 aa2.29□□□□□ -2.04
VPS50-209ENST00000467326 RPRMQ9NS64 109 aa2.29□□□□□ -2.04
VPS50-209ENST00000467326 DLC1Q96QB1 1528 aa2.28□□□□□ -2.04
VPS50-209ENST00000467326 MYOM2P54296 1465 aa2.28□□□□□ -2.04
VPS50-209ENST00000467326 RIC1Q4ADV7 1423 aa2.28□□□□□ -2.04
VPS50-209ENST00000467326 IGLV4-69A0A075B6H9 119 aa2.28□□□□□ -2.04
VPS50-209ENST00000467326 IGKV1OR2-108A0A075B7D4 117 aa2.28□□□□□ -2.04
VPS50-209ENST00000467326 IGHV3-15A0A0B4J1V0 119 aa2.28□□□□□ -2.04
VPS50-209ENST00000467326 LOC100130705A0A1B0GUX0 176 aa2.28□□□□□ -2.04
VPS50-209ENST00000467326 TCRBV3S1A0A5B6 114 aa2.28□□□□□ -2.04
VPS50-209ENST00000467326 C19orf71A6NCJ1 209 aa2.28□□□□□ -2.04
VPS50-209ENST00000467326 OR51F1A6NGY5 319 aa2.28□□□□□ -2.04
VPS50-209ENST00000467326 TMEM262E9PQX1 116 aa2.28□□□□□ -2.04
VPS50-209ENST00000467326 H3BPC8 53 aa2.28□□□□□ -2.04
VPS50-209ENST00000467326 H3BT86 120 aa2.28□□□□□ -2.04
VPS50-209ENST00000467326 CD14P08571 375 aa2.28□□□□□ -2.04
VPS50-209ENST00000467326 CISD3P0C7P0 127 aa2.28□□□□□ -2.04
VPS50-209ENST00000467326 ZNF705BP0CI00 300 aaPredicted RBP2.28□□□□□ -2.04
VPS50-209ENST00000467326 GZMBP10144 247 aa2.28□□□□□ -2.04
VPS50-209ENST00000467326 COX6A1P12074 109 aa2.28□□□□□ -2.04
VPS50-209ENST00000467326 IFITM1P13164 125 aa2.28□□□□□ -2.04
VPS50-209ENST00000467326 CCL5P13501 91 aa2.28□□□□□ -2.04
VPS50-209ENST00000467326 SNRPD3P62318 126 aaKnown RBP2.28□□□□□ -2.04
VPS50-209ENST00000467326 GNGT1P63211 74 aa2.28□□□□□ -2.04
VPS50-209ENST00000467326 PYY3Q5JQD4 70 aa2.28□□□□□ -2.04
VPS50-209ENST00000467326 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.28□□□□□ -2.04
VPS50-209ENST00000467326 C2orf91Q6ZV80 131 aa2.28□□□□□ -2.04
VPS50-209ENST00000467326 C5orf17Q8NAS9 161 aa2.28□□□□□ -2.04
VPS50-209ENST00000467326 WFDC11Q8NEX6 87 aa2.28□□□□□ -2.04
VPS50-209ENST00000467326 MUC7Q8TAX7 377 aa2.28□□□□□ -2.04
VPS50-209ENST00000467326 NAA38Q9BRA0 125 aaKnown RBP2.28□□□□□ -2.04
VPS50-209ENST00000467326 SMCO4Q9NRQ5 59 aa2.28□□□□□ -2.04
VPS50-209ENST00000467326 ZNFX1Q9P2E3 1918 aaKnown RBP2.28□□□□□ -2.04
VPS50-209ENST00000467326 RALGAPA2Q2PPJ7 1873 aa2.28□□□□□ -2.04
VPS50-209ENST00000467326 SYNJ1O43426 1573 aa2.27□□□□□ -2.05
VPS50-209ENST00000467326 MAPKBP1O60336 1514 aa2.27□□□□□ -2.05
VPS50-209ENST00000467326 MAP3K1Q13233 1512 aa2.27□□□□□ -2.05
VPS50-209ENST00000467326 A2ML1A8K2U0 1454 aa2.27□□□□□ -2.05
VPS50-209ENST00000467326 TRIP11Q15643 1979 aa2.27□□□□□ -2.05
VPS50-209ENST00000467326 LOXHD1Q8IVV2 1947 aa2.27□□□□□ -2.05
VPS50-209ENST00000467326 PLXNB3Q9ULL4 1909 aa2.27□□□□□ -2.05
VPS50-209ENST00000467326 NUP210Q8TEM1 1887 aaPredicted RBP2.27□□□□□ -2.05
VPS50-209ENST00000467326 ZNF106Q9H2Y7 1883 aaKnown RBP2.27□□□□□ -2.05
VPS50-209ENST00000467326 TRBV20-1A0A075B6N2 111 aa2.27□□□□□ -2.05
VPS50-209ENST00000467326 TRAV12-2A0A075B6T6 113 aa2.27□□□□□ -2.05
VPS50-209ENST00000467326 LOC107986453A0A1B0GWG9 222 aa2.27□□□□□ -2.05
VPS50-209ENST00000467326 PDCD5O14737 125 aa2.27□□□□□ -2.05
VPS50-209ENST00000467326 SYNGR2O43760 224 aa2.27□□□□□ -2.05
VPS50-209ENST00000467326 TIMM17BO60830 172 aa2.27□□□□□ -2.05
VPS50-209ENST00000467326 SPINK8P0C7L1 97 aa2.27□□□□□ -2.05
VPS50-209ENST00000467326 SAA1P0DJI8 122 aaPredicted RBP2.27□□□□□ -2.05
VPS50-209ENST00000467326 FUSP35637 526 aaKnown RBP eCLIP2.27□□□□□ -2.05
VPS50-209ENST00000467326 RPL28P46779 137 aaKnown RBP2.27□□□□□ -2.05
VPS50-209ENST00000467326 FXYD2P54710 66 aa2.27□□□□□ -2.05
VPS50-209ENST00000467326 DYNLT1P63172 113 aa2.27□□□□□ -2.05
VPS50-209ENST00000467326 DCDP81605 110 aaKnown RBP2.27□□□□□ -2.05
VPS50-209ENST00000467326 CDK5R1Q15078 307 aa2.27□□□□□ -2.05
VPS50-209ENST00000467326 PEA15Q15121 130 aa2.27□□□□□ -2.05
VPS50-209ENST00000467326 KISS1Q15726 138 aa2.27□□□□□ -2.05
VPS50-209ENST00000467326 Q5W150 140 aa2.27□□□□□ -2.05
VPS50-209ENST00000467326 DYNAPQ8N1N2 210 aa2.27□□□□□ -2.05
VPS50-209ENST00000467326 PLPP5Q8NEB5 264 aa2.27□□□□□ -2.05
VPS50-209ENST00000467326 UBALD1Q8TB05 177 aa2.27□□□□□ -2.05
VPS50-209ENST00000467326 VAMP8Q9BV40 100 aa2.27□□□□□ -2.05
VPS50-209ENST00000467326 FKBP11Q9NYL4 201 aa2.27□□□□□ -2.05
VPS50-209ENST00000467326 UBR2Q8IWV8 1755 aa2.27□□□□□ -2.05
VPS50-209ENST00000467326 ARID1AO14497 2285 aa2.27□□□□□ -2.05
VPS50-209ENST00000467326 BAZ1AQ9NRL2 1556 aaPredicted RBP2.27□□□□□ -2.05
VPS50-209ENST00000467326 ADGRL2O95490 1459 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 PZPP20742 1482 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 RPRD2Q5VT52 1461 aaKnown RBP2.26□□□□□ -2.05
VPS50-209ENST00000467326 PHLPP1O60346 1717 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 NACAE9PAV3 2078 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 PIKFYVEQ9Y2I7 2098 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 SPAARA0A1B0GVQ0 90 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 A0A1W2PRS3 328 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 A8MUU9 505 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 MRPS14O60783 128 aaKnown RBP2.26□□□□□ -2.05
VPS50-209ENST00000467326 APOC3P02656 99 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 FABP4P15090 132 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 PCBD1P61457 104 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 SUPT4H1P63272 117 aaKnown RBP2.26□□□□□ -2.05
VPS50-209ENST00000467326 ZNF816Q0VGE8 651 aaPredicted RBP2.26□□□□□ -2.05
VPS50-209ENST00000467326 HMGN3Q15651 99 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 ZNF660Q6AZW8 331 aaPredicted RBP2.26□□□□□ -2.05
VPS50-209ENST00000467326 MRPL54Q6P161 138 aaKnown RBP2.26□□□□□ -2.05
VPS50-209ENST00000467326 LYZL1Q6UWQ5 148 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 PP632Q6XCG6 107 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 FOXI2Q6ZQN5 318 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 ZNF720Q7Z2F6 126 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 C10orf111Q8N326 155 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 LINC00311Q8N616 119 aa2.26□□□□□ -2.05
VPS50-209ENST00000467326 MRPS24Q96EL2 167 aaKnown RBP2.26□□□□□ -2.05
VPS50-209ENST00000467326 DPH3Q96FX2 82 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms