RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 SMCO3A2RU48 225 aa6.79□□□□□ -1.32
USP39-212ENST00000465514 H3BRN7 92 aa6.79□□□□□ -1.32
USP39-212ENST00000465514 NUDT3O95989 172 aa6.79□□□□□ -1.32
USP39-212ENST00000465514 IL5P05113 134 aa6.79□□□□□ -1.32
USP39-212ENST00000465514 TSPOP30536 169 aa6.79□□□□□ -1.32
USP39-212ENST00000465514 AP3S2P59780 193 aa6.79□□□□□ -1.32
USP39-212ENST00000465514 Q6ZSN1 163 aa6.79□□□□□ -1.32
USP39-212ENST00000465514 CYP2G1PQ6ZSU1 146 aa6.79□□□□□ -1.32
USP39-212ENST00000465514 ACOT7LQ6ZUV0 252 aa6.79□□□□□ -1.32
USP39-212ENST00000465514 TMEM144Q7Z5S9 345 aa6.79□□□□□ -1.32
USP39-212ENST00000465514 LINC01587Q99440 93 aa6.79□□□□□ -1.32
USP39-212ENST00000465514 SLC25A21Q9BQT8 299 aaPredicted RBP6.79□□□□□ -1.32
USP39-212ENST00000465514 SHANK2-AS3Q9BTD1 123 aa6.79□□□□□ -1.32
USP39-212ENST00000465514 PLA2G2DQ9UNK4 145 aa6.79□□□□□ -1.32
USP39-212ENST00000465514 HIGD1AQ9Y241 93 aa6.79□□□□□ -1.32
USP39-212ENST00000465514 CBY3A6NI87 242 aa6.78□□□□□ -1.32
USP39-212ENST00000465514 H3BMQ9 156 aa6.78□□□□□ -1.32
USP39-212ENST00000465514 BOLA2-SMG1P6H3BVE0 249 aa6.78□□□□□ -1.32
USP39-212ENST00000465514 NOL3O60936 208 aaKnown RBP6.78□□□□□ -1.32
USP39-212ENST00000465514 HYPMO75409 117 aa6.78□□□□□ -1.32
USP39-212ENST00000465514 ATP5G1P05496 136 aa6.78□□□□□ -1.32
USP39-212ENST00000465514 PRB4P10163 310 aaPredicted RBP6.78□□□□□ -1.32
USP39-212ENST00000465514 RPL7P18124 248 aaKnown RBP6.78□□□□□ -1.32
USP39-212ENST00000465514 FUSP35637 526 aaKnown RBP eCLIP6.78□□□□□ -1.32
USP39-212ENST00000465514 ATP5G3P48201 142 aa6.78□□□□□ -1.32
USP39-212ENST00000465514 RAP2BP61225 183 aa6.78□□□□□ -1.32
USP39-212ENST00000465514 RHOBP62745 196 aa6.78□□□□□ -1.32
USP39-212ENST00000465514 ID3Q02535 119 aa6.78□□□□□ -1.32
USP39-212ENST00000465514 HIST1H1AQ02539 215 aaPredicted RBP6.78□□□□□ -1.32
USP39-212ENST00000465514 OR8A1Q8NGG7 326 aa6.78□□□□□ -1.32
USP39-212ENST00000465514 PPP1R14DQ9NXH3 145 aa6.78□□□□□ -1.32
USP39-212ENST00000465514 ADAP1O75689 374 aa6.77□□□□□ -1.33
USP39-212ENST00000465514 OR5G3P0C626 314 aa6.77□□□□□ -1.33
USP39-212ENST00000465514 LINC00869P0C866 280 aa6.77□□□□□ -1.33
USP39-212ENST00000465514 HTN1P15515 57 aa6.77□□□□□ -1.33
USP39-212ENST00000465514 CXCL3P19876 107 aa6.77□□□□□ -1.33
USP39-212ENST00000465514 TAS2R60P59551 318 aa6.77□□□□□ -1.33
USP39-212ENST00000465514 POLR2GP62487 172 aaKnown RBP eCLIP6.77□□□□□ -1.33
USP39-212ENST00000465514 PSG3Q16557 428 aa6.77□□□□□ -1.33
USP39-212ENST00000465514 TMEM256Q8N2U0 113 aa6.77□□□□□ -1.33
USP39-212ENST00000465514 LRRC20Q8TCA0 184 aa6.77□□□□□ -1.33
USP39-212ENST00000465514 UHRF2Q96PU4 802 aa6.77□□□□□ -1.33
USP39-212ENST00000465514 PSENENQ9NZ42 101 aa6.77□□□□□ -1.33
USP39-212ENST00000465514 LINC00588Q9Y4M8 146 aa6.77□□□□□ -1.33
USP39-212ENST00000465514 V9GYH0 126 aa6.77□□□□□ -1.33
USP39-212ENST00000465514 A0A087X0K7 114 aa6.76□□□□□ -1.33
USP39-212ENST00000465514 PMS2P5A8MQ11 134 aa6.76□□□□□ -1.33
USP39-212ENST00000465514 KRTAP29-1A8MX34 341 aaPredicted RBP6.76□□□□□ -1.33
USP39-212ENST00000465514 FAM229AH3BQW9 127 aa6.76□□□□□ -1.33
USP39-212ENST00000465514 SSSCA1O60232 199 aa6.76□□□□□ -1.33
USP39-212ENST00000465514 CCNKO75909 580 aa6.76□□□□□ -1.33
USP39-212ENST00000465514 BTF3P20290 206 aaKnown RBP6.76□□□□□ -1.33
USP39-212ENST00000465514 CCL18P55774 89 aa6.76□□□□□ -1.33
USP39-212ENST00000465514 PLP1P60201 277 aa6.76□□□□□ -1.33
USP39-212ENST00000465514 RRAS2P62070 204 aaPredicted RBP6.76□□□□□ -1.33
USP39-212ENST00000465514 SELENOTP62341 195 aa6.76□□□□□ -1.33
USP39-212ENST00000465514 XP32Q5T750 250 aa6.76□□□□□ -1.33
USP39-212ENST00000465514 PATE2Q6UY27 113 aa6.76□□□□□ -1.33
USP39-212ENST00000465514 RNF141Q8WVD5 230 aa6.76□□□□□ -1.33
USP39-212ENST00000465514 RPUSD4Q96CM3 377 aaKnown RBP6.76□□□□□ -1.33
USP39-212ENST00000465514 C16orf74Q96GX8 76 aa6.76□□□□□ -1.33
USP39-212ENST00000465514 KRTAP1-5Q9BYS1 174 aa6.76□□□□□ -1.33
USP39-212ENST00000465514 ARL6Q9H0F7 186 aa6.76□□□□□ -1.33
USP39-212ENST00000465514 NOP10Q9NPE3 64 aaKnown RBP6.76□□□□□ -1.33
USP39-212ENST00000465514 PTTG2Q9NZH5 202 aa6.76□□□□□ -1.33
USP39-212ENST00000465514 TIMM8BQ9Y5J9 83 aaPredicted RBP6.76□□□□□ -1.33
USP39-212ENST00000465514 C9orf170A2RU37 121 aa6.75□□□□□ -1.33
USP39-212ENST00000465514 ANXA7P20073 488 aaKnown RBP6.75□□□□□ -1.33
USP39-212ENST00000465514 UBE2MP61081 183 aaKnown RBP6.75□□□□□ -1.33
USP39-212ENST00000465514 DLK1P80370 383 aa6.75□□□□□ -1.33
USP39-212ENST00000465514 CLINT1Q14677 625 aa6.75□□□□□ -1.33
USP39-212ENST00000465514 SSX7Q7RTT5 188 aa6.75□□□□□ -1.33
USP39-212ENST00000465514 S100A7AQ86SG5 101 aa6.75□□□□□ -1.33
USP39-212ENST00000465514 DEDD2Q8WXF8 326 aa6.75□□□□□ -1.33
USP39-212ENST00000465514 SMIM8Q96KF7 97 aa6.75□□□□□ -1.33
USP39-212ENST00000465514 NPVFQ9HCQ7 196 aa6.75□□□□□ -1.33
USP39-212ENST00000465514 A6NJY4 79 aa6.74□□□□□ -1.33
USP39-212ENST00000465514 MRPS12O15235 138 aaKnown RBP6.74□□□□□ -1.33
USP39-212ENST00000465514 SNRPCP09234 159 aaKnown RBP6.74□□□□□ -1.33
USP39-212ENST00000465514 METTL15P1P0C7V9 234 aa6.74□□□□□ -1.33
USP39-212ENST00000465514 S100A5P33763 92 aa6.74□□□□□ -1.33
USP39-212ENST00000465514 CDKN1BP46527 198 aa6.74□□□□□ -1.33
USP39-212ENST00000465514 HAMPP81172 84 aa6.74□□□□□ -1.33
USP39-212ENST00000465514 OR5I1Q13606 314 aa6.74□□□□□ -1.33
USP39-212ENST00000465514 KIR3DS1Q14943 382 aa6.74□□□□□ -1.33
USP39-212ENST00000465514 TMEM14EPQ6UXP3 125 aa6.74□□□□□ -1.33
USP39-212ENST00000465514 ZNF493Q6ZR52 646 aa6.74□□□□□ -1.33
USP39-212ENST00000465514 RNASE8Q8TDE3 154 aaKnown RBP6.74□□□□□ -1.33
USP39-212ENST00000465514 ARV1Q9H2C2 271 aa6.74□□□□□ -1.33
USP39-212ENST00000465514 FNDC10F2Z333 226 aa6.73□□□□□ -1.33
USP39-212ENST00000465514 H7BYZ3 331 aa6.73□□□□□ -1.33
USP39-212ENST00000465514 K7EPK0 472 aa6.73□□□□□ -1.33
USP39-212ENST00000465514 GOSR2O14653 212 aa6.73□□□□□ -1.33
USP39-212ENST00000465514 SLC38A11Q08AI6 406 aa6.73□□□□□ -1.33
USP39-212ENST00000465514 ICAM4Q14773 271 aa6.73□□□□□ -1.33
USP39-212ENST00000465514 PXDC1Q5TGL8 231 aa6.73□□□□□ -1.33
USP39-212ENST00000465514 TEPPQ6URK8 271 aa6.73□□□□□ -1.33
USP39-212ENST00000465514 LCN15Q6UWW0 184 aa6.73□□□□□ -1.33
USP39-212ENST00000465514 LINC00305Q7Z4B0 112 aa6.73□□□□□ -1.33
USP39-212ENST00000465514 CCDC190Q86UF4 302 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms