RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 SLC35B3Q9H1N7 401 aa2.82□□□□□ -1.96
VPS8-217ENST00000465213 ANAPC11Q9NYG5 84 aa2.82□□□□□ -1.96
VPS8-217ENST00000465213 NOP16Q9Y3C1 178 aaKnown RBP2.82□□□□□ -1.96
VPS8-217ENST00000465213 EP400Q96L91 3159 aa2.82□□□□□ -1.96
VPS8-217ENST00000465213 RRBP1Q9P2E9 1410 aaKnown RBP2.82□□□□□ -1.96
VPS8-217ENST00000465213 COL16A1Q07092 1604 aaPredicted RBP2.82□□□□□ -1.96
VPS8-217ENST00000465213 TRPM1Q7Z4N2 1603 aa2.82□□□□□ -1.96
VPS8-217ENST00000465213 BCORL1Q5H9F3 1711 aa2.82□□□□□ -1.96
VPS8-217ENST00000465213 SHANK3Q9BYB0 1731 aa2.82□□□□□ -1.96
VPS8-217ENST00000465213 CACNA1BQ00975 2339 aa2.81□□□□□ -1.96
VPS8-217ENST00000465213 A6NED7 52 aa2.81□□□□□ -1.96
VPS8-217ENST00000465213 RER1O15258 196 aa2.81□□□□□ -1.96
VPS8-217ENST00000465213 SYNGR2O43760 224 aa2.81□□□□□ -1.96
VPS8-217ENST00000465213 KLF7O75840 302 aaPredicted RBP2.81□□□□□ -1.96
VPS8-217ENST00000465213 IGKV1D-33P01593 117 aa2.81□□□□□ -1.96
VPS8-217ENST00000465213 IGKV1-33P01594 117 aa2.81□□□□□ -1.96
VPS8-217ENST00000465213 CD2P06729 351 aa2.81□□□□□ -1.96
VPS8-217ENST00000465213 MSMBP08118 114 aa2.81□□□□□ -1.96
VPS8-217ENST00000465213 CCL5P13501 91 aa2.81□□□□□ -1.96
VPS8-217ENST00000465213 NFYAP23511 347 aaPredicted RBP2.81□□□□□ -1.96
VPS8-217ENST00000465213 MPV17P39210 176 aa2.81□□□□□ -1.96
VPS8-217ENST00000465213 ZNF90Q03938 601 aa2.81□□□□□ -1.96
VPS8-217ENST00000465213 Q56UQ5 140 aa2.81□□□□□ -1.96
VPS8-217ENST00000465213 NOXRED1Q6NXP6 359 aa2.81□□□□□ -1.96
VPS8-217ENST00000465213 LYZL2Q7Z4W2 148 aa2.81□□□□□ -1.96
VPS8-217ENST00000465213 PFN4Q8NHR9 129 aa2.81□□□□□ -1.96
VPS8-217ENST00000465213 SMDT1Q9H4I9 107 aa2.81□□□□□ -1.96
VPS8-217ENST00000465213 ZNF355PQ9NSJ1 428 aa2.81□□□□□ -1.96
VPS8-217ENST00000465213 ZNF222Q9UK12 451 aa2.81□□□□□ -1.96
VPS8-217ENST00000465213 CHCHD2Q9Y6H1 151 aaPredicted RBP2.81□□□□□ -1.96
VPS8-217ENST00000465213 HSPE1-MOB4S4R3N1 261 aa2.81□□□□□ -1.96
VPS8-217ENST00000465213 URB2Q14146 1524 aaKnown RBP2.81□□□□□ -1.96
VPS8-217ENST00000465213 NRKQ7Z2Y5 1582 aa2.81□□□□□ -1.96
VPS8-217ENST00000465213 CUL7Q14999 1698 aa2.81□□□□□ -1.96
VPS8-217ENST00000465213 KIAA1551Q9HCM1 1747 aa2.81□□□□□ -1.96
VPS8-217ENST00000465213 PCM1Q15154 2024 aa2.81□□□□□ -1.96
VPS8-217ENST00000465213 ATG2BQ96BY7 2078 aa2.81□□□□□ -1.96
VPS8-217ENST00000465213 SVILO95425 2214 aa2.81□□□□□ -1.96
VPS8-217ENST00000465213 CHD6Q8TD26 2715 aa2.81□□□□□ -1.96
VPS8-217ENST00000465213 GPR179Q6PRD1 2367 aa2.8□□□□□ -1.96
VPS8-217ENST00000465213 NUP210LQ5VU65 1888 aa2.8□□□□□ -1.96
VPS8-217ENST00000465213 LRP6O75581 1613 aa2.8□□□□□ -1.96
VPS8-217ENST00000465213 NWD1Q149M9 1564 aa2.8□□□□□ -1.96
VPS8-217ENST00000465213 DLC1Q96QB1 1528 aa2.8□□□□□ -1.96
VPS8-217ENST00000465213 CFTRP13569 1480 aa2.8□□□□□ -1.96
VPS8-217ENST00000465213 A0A0J9YW62 118 aa2.8□□□□□ -1.96
VPS8-217ENST00000465213 TCRBV3S1A0A5B6 114 aa2.8□□□□□ -1.96
VPS8-217ENST00000465213 H3BMM0 161 aa2.8□□□□□ -1.96
VPS8-217ENST00000465213 K7ERJ3 54 aa2.8□□□□□ -1.96
VPS8-217ENST00000465213 GEMIN2O14893 280 aaKnown RBP2.8□□□□□ -1.96
VPS8-217ENST00000465213 LY6HO94772 140 aa2.8□□□□□ -1.96
VPS8-217ENST00000465213 LHBP01229 141 aa2.8□□□□□ -1.96
VPS8-217ENST00000465213 MT-ND6P03923 174 aa2.8□□□□□ -1.96
VPS8-217ENST00000465213 SPINK8P0C7L1 97 aa2.8□□□□□ -1.96
VPS8-217ENST00000465213 IFITM1P13164 125 aa2.8□□□□□ -1.96
VPS8-217ENST00000465213 TPT1P13693 172 aaKnown RBP2.8□□□□□ -1.96
VPS8-217ENST00000465213 CD24P25063 80 aa2.8□□□□□ -1.96
VPS8-217ENST00000465213 FUSP35637 526 aaKnown RBP eCLIP2.8□□□□□ -1.96
VPS8-217ENST00000465213 MRPS36P82909 103 aaKnown RBP2.8□□□□□ -1.96
VPS8-217ENST00000465213 ZNF79Q15937 498 aa2.8□□□□□ -1.96
VPS8-217ENST00000465213 MRPL54Q6P161 138 aaKnown RBP2.8□□□□□ -1.96
VPS8-217ENST00000465213 SDIM1Q6ZPB5 146 aa2.8□□□□□ -1.96
VPS8-217ENST00000465213 DYNAPQ8N1N2 210 aa2.8□□□□□ -1.96
VPS8-217ENST00000465213 SVBPQ8N300 66 aa2.8□□□□□ -1.96
VPS8-217ENST00000465213 SPANXA2-OT1Q8N9U9 137 aa2.8□□□□□ -1.96
VPS8-217ENST00000465213 WFDC11Q8NEX6 87 aa2.8□□□□□ -1.96
VPS8-217ENST00000465213 UBE2WQ96B02 151 aa2.8□□□□□ -1.96
VPS8-217ENST00000465213 SEC11CQ9BY50 192 aa2.8□□□□□ -1.96
VPS8-217ENST00000465213 TTTY13Q9BZ97 58 aa2.8□□□□□ -1.96
VPS8-217ENST00000465213 DNAJC15Q9Y5T4 150 aa2.8□□□□□ -1.96
VPS8-217ENST00000465213 GLI3P10071 1580 aa2.79□□□□□ -1.96
VPS8-217ENST00000465213 CPS1P31327 1500 aa2.79□□□□□ -1.96
VPS8-217ENST00000465213 CRB1P82279 1406 aa2.79□□□□□ -1.96
VPS8-217ENST00000465213 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.79□□□□□ -1.96
VPS8-217ENST00000465213 PINLYPA6NC86 204 aa2.79□□□□□ -1.96
VPS8-217ENST00000465213 APOC4-APOC2K7ER74 178 aa2.79□□□□□ -1.96
VPS8-217ENST00000465213 SDCBPO00560 298 aaPredicted RBP2.79□□□□□ -1.96
VPS8-217ENST00000465213 KRTAP5-8O75690 187 aa2.79□□□□□ -1.96
VPS8-217ENST00000465213 APOC2P02655 101 aa2.79□□□□□ -1.96
VPS8-217ENST00000465213 RBP4P02753 201 aa2.79□□□□□ -1.96
VPS8-217ENST00000465213 TRGV3P03979 118 aa2.79□□□□□ -1.96
VPS8-217ENST00000465213 FOXA1P55317 472 aa2.79□□□□□ -1.96
VPS8-217ENST00000465213 SNRPD3P62318 126 aaKnown RBP2.79□□□□□ -1.96
VPS8-217ENST00000465213 ASB16-AS1Q495Z4 193 aa2.79□□□□□ -1.96
VPS8-217ENST00000465213 C6orf52Q5T4I8 152 aa2.79□□□□□ -1.96
VPS8-217ENST00000465213 PATE2Q6UY27 113 aa2.79□□□□□ -1.96
VPS8-217ENST00000465213 Q6ZQT7 251 aa2.79□□□□□ -1.96
VPS8-217ENST00000465213 FAM216BQ8N7L0 139 aa2.79□□□□□ -1.96
VPS8-217ENST00000465213 FGF13Q92913 245 aa2.79□□□□□ -1.96
VPS8-217ENST00000465213 RAB37Q96AX2 223 aa2.79□□□□□ -1.96
VPS8-217ENST00000465213 LINC00526Q96FQ7 95 aa2.79□□□□□ -1.96
VPS8-217ENST00000465213 IMMP1LQ96LU5 166 aa2.79□□□□□ -1.96
VPS8-217ENST00000465213 PKMYT1Q99640 499 aa2.79□□□□□ -1.96
VPS8-217ENST00000465213 LINC00467Q9BRT7 94 aa2.79□□□□□ -1.96
VPS8-217ENST00000465213 AGPAT4-IT1Q9H0P7 198 aa2.79□□□□□ -1.96
VPS8-217ENST00000465213 NHP2Q9NX24 153 aaKnown RBP2.79□□□□□ -1.96
VPS8-217ENST00000465213 ECM29Q5VYK3 1845 aa2.78□□□□□ -1.96
VPS8-217ENST00000465213 IGHV3-73A0A0B4J1V6 119 aa2.78□□□□□ -1.96
VPS8-217ENST00000465213 C3orf85A0A1B0GTC6 90 aa2.78□□□□□ -1.96
VPS8-217ENST00000465213 TMEM262E9PQX1 116 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms