RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 IGKV1D-39P04432 117 aa6.15□□□□□ -1.42
APP-213ENST00000464867 RFX2P48378 723 aa6.15□□□□□ -1.42
APP-213ENST00000464867 CRYBA4P53673 196 aa6.15□□□□□ -1.42
APP-213ENST00000464867 C2orf83Q53S99 150 aa6.15□□□□□ -1.42
APP-213ENST00000464867 STEAP1BQ6NZ63 245 aa6.15□□□□□ -1.42
APP-213ENST00000464867 C10orf67Q8IYJ2 551 aa6.15□□□□□ -1.42
APP-213ENST00000464867 SPARTQ8N0X7 666 aa6.15□□□□□ -1.42
APP-213ENST00000464867 ZBTB8BQ8NAP8 495 aaPredicted RBP6.15□□□□□ -1.42
APP-213ENST00000464867 OR1B1Q8NGR6 318 aa6.15□□□□□ -1.42
APP-213ENST00000464867 GPR82Q96P67 336 aa6.15□□□□□ -1.42
APP-213ENST00000464867 PAXXQ9BUH6 204 aa6.15□□□□□ -1.42
APP-213ENST00000464867 IFT46Q9NQC8 304 aa6.15□□□□□ -1.42
APP-213ENST00000464867 LSM2Q9Y333 95 aaKnown RBP6.15□□□□□ -1.42
APP-213ENST00000464867 PTGES3LE9PB15 166 aa6.14□□□□□ -1.43
APP-213ENST00000464867 GABARAPH6UMI1 98 aa6.14□□□□□ -1.43
APP-213ENST00000464867 LECT2O14960 151 aa6.14□□□□□ -1.43
APP-213ENST00000464867 GABARAPO95166 117 aa6.14□□□□□ -1.43
APP-213ENST00000464867 IGHV3-53P01767 116 aa6.14□□□□□ -1.43
APP-213ENST00000464867 SPCS3P61009 180 aa6.14□□□□□ -1.43
APP-213ENST00000464867 CD300CQ08708 224 aa6.14□□□□□ -1.43
APP-213ENST00000464867 FOXI1Q12951 378 aa6.14□□□□□ -1.43
APP-213ENST00000464867 TRIM16LQ309B1 348 aa6.14□□□□□ -1.43
APP-213ENST00000464867 C8orf59Q8N0T1 100 aaPredicted RBP6.14□□□□□ -1.43
APP-213ENST00000464867 ZNF680Q8NEM1 530 aa6.14□□□□□ -1.43
APP-213ENST00000464867 OR5H2Q8NGV7 314 aa6.14□□□□□ -1.43
APP-213ENST00000464867 RNASE11Q8TAA1 199 aaKnown RBP6.14□□□□□ -1.43
APP-213ENST00000464867 ST6GAL2Q96JF0 529 aa6.14□□□□□ -1.43
APP-213ENST00000464867 TXNDC17Q9BRA2 123 aa6.14□□□□□ -1.43
APP-213ENST00000464867 SLC25A32Q9H2D1 315 aa6.14□□□□□ -1.43
APP-213ENST00000464867 DIRC3C9JPN6 131 aa6.13□□□□□ -1.43
APP-213ENST00000464867 E5RGE8 158 aa6.13□□□□□ -1.43
APP-213ENST00000464867 K7EQD1 137 aa6.13□□□□□ -1.43
APP-213ENST00000464867 NXPH3O95157 252 aa6.13□□□□□ -1.43
APP-213ENST00000464867 PMP2P02689 132 aa6.13□□□□□ -1.43
APP-213ENST00000464867 TAS2R46P59540 309 aa6.13□□□□□ -1.43
APP-213ENST00000464867 ZNF90Q03938 601 aa6.13□□□□□ -1.43
APP-213ENST00000464867 WFDC2Q14508 124 aa6.13□□□□□ -1.43
APP-213ENST00000464867 LINC01556Q5JQF7 62 aa6.13□□□□□ -1.43
APP-213ENST00000464867 FFAR4Q5NUL3 377 aa6.13□□□□□ -1.43
APP-213ENST00000464867 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.13□□□□□ -1.43
APP-213ENST00000464867 DHRSXQ8N5I4 330 aa6.13□□□□□ -1.43
APP-213ENST00000464867 OR4D5Q8NGN0 318 aa6.13□□□□□ -1.43
APP-213ENST00000464867 LRRC20Q8TCA0 184 aa6.13□□□□□ -1.43
APP-213ENST00000464867 PYGO2Q9BRQ0 406 aa6.13□□□□□ -1.43
APP-213ENST00000464867 C1orf43Q9BWL3 253 aa6.13□□□□□ -1.43
APP-213ENST00000464867 FKBP14Q9NWM8 211 aa6.13□□□□□ -1.43
APP-213ENST00000464867 TMEM56-RWDD3S4R434 201 aa6.13□□□□□ -1.43
APP-213ENST00000464867 TRAV8-2A0A0B4J237 113 aa6.12□□□□□ -1.43
APP-213ENST00000464867 TRAV8-6A0A0B4J262 113 aa6.12□□□□□ -1.43
APP-213ENST00000464867 TRGV4A0A0C4DH28 118 aa6.12□□□□□ -1.43
APP-213ENST00000464867 A0A0D9SG52 128 aa6.12□□□□□ -1.43
APP-213ENST00000464867 MEIS3P1A6NDR6 274 aa6.12□□□□□ -1.43
APP-213ENST00000464867 CFDP00746 253 aaPredicted RBP6.12□□□□□ -1.43
APP-213ENST00000464867 IGKV1-5P01602 117 aa6.12□□□□□ -1.43
APP-213ENST00000464867 ORM1P02763 201 aa6.12□□□□□ -1.43
APP-213ENST00000464867 RAP2BP61225 183 aa6.12□□□□□ -1.43
APP-213ENST00000464867 TSPAN5P62079 268 aa6.12□□□□□ -1.43
APP-213ENST00000464867 MLLT11Q13015 90 aaPredicted RBP6.12□□□□□ -1.43
APP-213ENST00000464867 CCDC190Q86UF4 302 aa6.12□□□□□ -1.43
APP-213ENST00000464867 FAM219AQ8IW50 185 aa6.12□□□□□ -1.43
APP-213ENST00000464867 Q8N976 141 aa6.12□□□□□ -1.43
APP-213ENST00000464867 MRPL32Q9BYC8 188 aaKnown RBP6.12□□□□□ -1.43
APP-213ENST00000464867 FXYD6Q9H0Q3 95 aa6.12□□□□□ -1.43
APP-213ENST00000464867 GSN-AS1Q9NRJ2 163 aa6.12□□□□□ -1.43
APP-213ENST00000464867 RHBDL2Q9NX52 303 aa6.12□□□□□ -1.43
APP-213ENST00000464867 CEBPZOSA8MTT3 80 aa6.11□□□□□ -1.43
APP-213ENST00000464867 PPT1P50897 306 aa6.11□□□□□ -1.43
APP-213ENST00000464867 LAGE3Q14657 143 aa6.11□□□□□ -1.43
APP-213ENST00000464867 GFI1BQ5VTD9 330 aa6.11□□□□□ -1.43
APP-213ENST00000464867 C9orf47Q6ZRZ4 202 aa6.11□□□□□ -1.43
APP-213ENST00000464867 SH2D6Q7Z4S9 175 aa6.11□□□□□ -1.43
APP-213ENST00000464867 BLNKQ8WV28 456 aa6.11□□□□□ -1.43
APP-213ENST00000464867 SLC35E1Q96K37 410 aa6.11□□□□□ -1.43
APP-213ENST00000464867 AUNIPQ9H7T9 357 aa6.11□□□□□ -1.43
APP-213ENST00000464867 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.11□□□□□ -1.43
APP-213ENST00000464867 SCN3BQ9NY72 215 aa6.11□□□□□ -1.43
APP-213ENST00000464867 A0A0A6YYH2 397 aa6.1□□□□□ -1.43
APP-213ENST00000464867 TRAV12-3A0A0B4J271 114 aa6.1□□□□□ -1.43
APP-213ENST00000464867 SMIM30A4D0T7 59 aa6.1□□□□□ -1.43
APP-213ENST00000464867 A6NJ64 397 aa6.1□□□□□ -1.43
APP-213ENST00000464867 RGS10O43665 173 aa6.1□□□□□ -1.43
APP-213ENST00000464867 ATP5HO75947 161 aa6.1□□□□□ -1.43
APP-213ENST00000464867 GGNBP1Q5YKI7 109 aa6.1□□□□□ -1.43
APP-213ENST00000464867 LAIR2Q6ISS4 152 aa6.1□□□□□ -1.43
APP-213ENST00000464867 BAALCQ8WXS3 180 aa6.1□□□□□ -1.43
APP-213ENST00000464867 RPUSD4Q96CM3 377 aaKnown RBP6.1□□□□□ -1.43
APP-213ENST00000464867 MGLLQ99685 303 aa6.1□□□□□ -1.43
APP-213ENST00000464867 SLC25A31Q9H0C2 315 aa6.1□□□□□ -1.43
APP-213ENST00000464867 SLC45A2Q9UMX9 530 aa6.1□□□□□ -1.43
APP-213ENST00000464867 COX11Q9Y6N1 276 aa6.1□□□□□ -1.43
APP-213ENST00000464867 TRAV8-3A0A0A6YYJ7 113 aa6.09□□□□□ -1.43
APP-213ENST00000464867 CRYM-AS1A6NIL9 109 aa6.09□□□□□ -1.43
APP-213ENST00000464867 J3KRW8 73 aa6.09□□□□□ -1.43
APP-213ENST00000464867 SPINK4O60575 86 aa6.09□□□□□ -1.43
APP-213ENST00000464867 CCNKO75909 580 aa6.09□□□□□ -1.43
APP-213ENST00000464867 IGHV3-30P01768 117 aa6.09□□□□□ -1.43
APP-213ENST00000464867 IGHV3-33P01772 117 aa6.09□□□□□ -1.43
APP-213ENST00000464867 IGHV3-30-3P0DP02 117 aa6.09□□□□□ -1.43
APP-213ENST00000464867 IGHV3-30-5P0DP03 117 aa6.09□□□□□ -1.43
APP-213ENST00000464867 OR10J3Q5JRS4 329 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms