RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 Q6ZS46 218 aa11.3□□□□□ -0.6
COL5A1-205ENST00000464187 TMEM256Q8N2U0 113 aa11.3□□□□□ -0.6
COL5A1-205ENST00000464187 NUDT10Q8NFP7 164 aa11.3□□□□□ -0.6
COL5A1-205ENST00000464187 RNF125Q96EQ8 232 aa11.3□□□□□ -0.6
COL5A1-205ENST00000464187 NUDT11Q96G61 164 aa11.3□□□□□ -0.6
COL5A1-205ENST00000464187 FMC1Q96HJ9 113 aa11.3□□□□□ -0.6
COL5A1-205ENST00000464187 TMEM68Q96MH6 324 aa11.3□□□□□ -0.6
COL5A1-205ENST00000464187 OTORQ9NRC9 128 aa11.3□□□□□ -0.6
COL5A1-205ENST00000464187 GRIFINA4D1Z8 144 aa11.29□□□□□ -0.6
COL5A1-205ENST00000464187 GNG7O60262 68 aa11.29□□□□□ -0.6
COL5A1-205ENST00000464187 TCRAP04437 139 aa11.29□□□□□ -0.6
COL5A1-205ENST00000464187 IL4P05112 153 aa11.29□□□□□ -0.6
COL5A1-205ENST00000464187 MFAP4P55083 255 aa11.29□□□□□ -0.6
COL5A1-205ENST00000464187 PRR27Q6MZM9 219 aa11.29□□□□□ -0.6
COL5A1-205ENST00000464187 TMEM136Q6ZRR5 245 aa11.29□□□□□ -0.6
COL5A1-205ENST00000464187 SMIM12Q96EX1 92 aa11.29□□□□□ -0.6
COL5A1-205ENST00000464187 LINC00527Q9UJ94 153 aa11.29□□□□□ -0.6
COL5A1-205ENST00000464187 TRAV30A0A087WSZ9 112 aa11.28□□□□□ -0.6
COL5A1-205ENST00000464187 IZUMO1RA6ND01 250 aa11.28□□□□□ -0.6
COL5A1-205ENST00000464187 NDUFB8O95169 186 aa11.28□□□□□ -0.6
COL5A1-205ENST00000464187 IGF1P05019 195 aa11.28□□□□□ -0.6
COL5A1-205ENST00000464187 CRIP2P52943 208 aaPredicted RBP11.28□□□□□ -0.6
COL5A1-205ENST00000464187 FAM110DQ8TAY7 271 aaPredicted RBP11.28□□□□□ -0.6
COL5A1-205ENST00000464187 TMEM18Q96B42 140 aa11.28□□□□□ -0.6
COL5A1-205ENST00000464187 GRAMD2BQ96HH9 432 aa11.28□□□□□ -0.6
COL5A1-205ENST00000464187 GPR82Q96P67 336 aa11.28□□□□□ -0.6
COL5A1-205ENST00000464187 DUX5Q96PT3 197 aa11.28□□□□□ -0.6
COL5A1-205ENST00000464187 MLST8Q9BVC4 326 aa11.28□□□□□ -0.6
COL5A1-205ENST00000464187 TMEM160Q9NX00 188 aa11.28□□□□□ -0.6
COL5A1-205ENST00000464187 TP53TG3Q9ULZ0 132 aa11.28□□□□□ -0.6
COL5A1-205ENST00000464187 NUPR1O60356 82 aa11.28□□□□□ -0.6
COL5A1-205ENST00000464187 OR2J3O76001 311 aa11.28□□□□□ -0.6
COL5A1-205ENST00000464187 LY6G6DO95868 133 aa11.28□□□□□ -0.6
COL5A1-205ENST00000464187 LTAP01374 205 aa11.28□□□□□ -0.6
COL5A1-205ENST00000464187 IGLC2P0DOY2 106 aa11.28□□□□□ -0.6
COL5A1-205ENST00000464187 RPL19P84098 196 aaKnown RBP11.28□□□□□ -0.6
COL5A1-205ENST00000464187 JOSD1Q15040 202 aaPredicted RBP11.28□□□□□ -0.6
COL5A1-205ENST00000464187 USF2Q15853 346 aaPredicted RBP11.28□□□□□ -0.6
COL5A1-205ENST00000464187 MRPL54Q6P161 138 aaKnown RBP11.28□□□□□ -0.6
COL5A1-205ENST00000464187 WDR73Q6P4I2 378 aa11.28□□□□□ -0.6
COL5A1-205ENST00000464187 EXOC3-AS1Q8N2X6 119 aa11.28□□□□□ -0.6
COL5A1-205ENST00000464187 C21orf62Q9NYP8 219 aa11.28□□□□□ -0.6
COL5A1-205ENST00000464187 CUBNO60494 3623 aa11.27□□□□□ -0.61
COL5A1-205ENST00000464187 TRAV41A0A0B4J266 112 aa11.27□□□□□ -0.61
COL5A1-205ENST00000464187 MRPS12O15235 138 aaKnown RBP11.27□□□□□ -0.61
COL5A1-205ENST00000464187 MT-ND6P03923 174 aa11.27□□□□□ -0.61
COL5A1-205ENST00000464187 Q56UQ5 140 aa11.27□□□□□ -0.61
COL5A1-205ENST00000464187 BPIFA4PQ86YQ2 179 aa11.27□□□□□ -0.61
COL5A1-205ENST00000464187 C17orf77Q96MU5 243 aa11.27□□□□□ -0.61
COL5A1-205ENST00000464187 THYN1Q9P016 225 aa11.27□□□□□ -0.61
COL5A1-205ENST00000464187 NAT8BQ9UHF3 227 aa11.27□□□□□ -0.61
COL5A1-205ENST00000464187 BAHCC1Q9P281 2608 aa11.27□□□□□ -0.61
COL5A1-205ENST00000464187 TRBV19A0A075B6N1 114 aa11.26□□□□□ -0.61
COL5A1-205ENST00000464187 IGHV3-23P01764 117 aa11.26□□□□□ -0.61
COL5A1-205ENST00000464187 GZMBP10144 247 aa11.26□□□□□ -0.61
COL5A1-205ENST00000464187 CRISP2P16562 243 aa11.26□□□□□ -0.61
COL5A1-205ENST00000464187 LINC00310P59036 64 aa11.26□□□□□ -0.61
COL5A1-205ENST00000464187 COX19Q49B96 90 aa11.26□□□□□ -0.61
COL5A1-205ENST00000464187 C19orf54Q5BKX5 351 aa11.26□□□□□ -0.61
COL5A1-205ENST00000464187 Q86TA4 180 aa11.26□□□□□ -0.61
COL5A1-205ENST00000464187 OR4F17Q8NGA8 305 aa11.26□□□□□ -0.61
COL5A1-205ENST00000464187 NOL4LQ96MY1 436 aaPredicted RBP11.26□□□□□ -0.61
COL5A1-205ENST00000464187 CHRDL1Q9BU40 450 aa11.26□□□□□ -0.61
COL5A1-205ENST00000464187 FCGR2BP31994 310 aaPredicted RBP11.25□□□□□ -0.61
COL5A1-205ENST00000464187 LINC00322Q6ZN03 302 aaPredicted RBP11.25□□□□□ -0.61
COL5A1-205ENST00000464187 HIVEP2P31629 2446 aa11.25□□□□□ -0.61
COL5A1-205ENST00000464187 TRAV8-1A0A0A6YYK1 113 aa11.25□□□□□ -0.61
COL5A1-205ENST00000464187 IGLV2-11P01706 119 aa11.25□□□□□ -0.61
COL5A1-205ENST00000464187 CTAG1AP78358 180 aa11.25□□□□□ -0.61
COL5A1-205ENST00000464187 SIGLEC15Q6ZMC9 328 aa11.25□□□□□ -0.61
COL5A1-205ENST00000464187 GOLT1AQ6ZVE7 132 aa11.25□□□□□ -0.61
COL5A1-205ENST00000464187 TMEM86BQ8N661 226 aa11.25□□□□□ -0.61
COL5A1-205ENST00000464187 NUP35Q8NFH5 326 aa11.25□□□□□ -0.61
COL5A1-205ENST00000464187 ZNF492Q9P255 531 aa11.25□□□□□ -0.61
COL5A1-205ENST00000464187 C19orf71A6NCJ1 209 aa11.24□□□□□ -0.61
COL5A1-205ENST00000464187 OR2T8A6NH00 312 aa11.24□□□□□ -0.61
COL5A1-205ENST00000464187 F2Z2F3 143 aa11.24□□□□□ -0.61
COL5A1-205ENST00000464187 HLA-DQA1P01909 254 aa11.24□□□□□ -0.61
COL5A1-205ENST00000464187 PPIFP30405 207 aaKnown RBP11.24□□□□□ -0.61
COL5A1-205ENST00000464187 RAB4BP61018 213 aa11.24□□□□□ -0.61
COL5A1-205ENST00000464187 KLK9Q2XQG4 91 aa11.24□□□□□ -0.61
COL5A1-205ENST00000464187 Q71RC1 249 aaPredicted RBP11.24□□□□□ -0.61
COL5A1-205ENST00000464187 CMTM2Q8TAZ6 248 aa11.24□□□□□ -0.61
COL5A1-205ENST00000464187 WIPF2Q8TF74 440 aaPredicted RBP11.24□□□□□ -0.61
COL5A1-205ENST00000464187 TSKUQ8WUA8 353 aa11.24□□□□□ -0.61
COL5A1-205ENST00000464187 NEU1Q99519 415 aa11.24□□□□□ -0.61
COL5A1-205ENST00000464187 NPFFR1Q9GZQ6 430 aa11.24□□□□□ -0.61
COL5A1-205ENST00000464187 FBXL7Q9UJT9 491 aa11.24□□□□□ -0.61
COL5A1-205ENST00000464187 KLK9Q9UKQ9 250 aa11.24□□□□□ -0.61
COL5A1-205ENST00000464187 RNF24Q9Y225 148 aa11.24□□□□□ -0.61
COL5A1-205ENST00000464187 SERF1AO75920 110 aa11.23□□□□□ -0.61
COL5A1-205ENST00000464187 FOSL1P15407 271 aa11.23□□□□□ -0.61
COL5A1-205ENST00000464187 SRD5A1P18405 259 aa11.23□□□□□ -0.61
COL5A1-205ENST00000464187 RHOGP84095 191 aa11.23□□□□□ -0.61
COL5A1-205ENST00000464187 Q0VG73 95 aa11.23□□□□□ -0.61
COL5A1-205ENST00000464187 SCGB2A2Q13296 93 aa11.23□□□□□ -0.61
COL5A1-205ENST00000464187 TMEM95Q3KNT9 176 aa11.23□□□□□ -0.61
COL5A1-205ENST00000464187 TMEM190Q8WZ59 177 aa11.23□□□□□ -0.61
COL5A1-205ENST00000464187 ZNF414Q96IQ9 312 aa11.23□□□□□ -0.61
COL5A1-205ENST00000464187 MS4A10Q96PG2 267 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms