RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 ZNF705DP0CH99 300 aaPredicted RBP9.46□□□□□ -0.9
HDAC1-203ENST00000463172 ZNF705BP0CI00 300 aaPredicted RBP9.46□□□□□ -0.9
HDAC1-203ENST00000463172 SPART-AS1P0CW21 52 aa9.46□□□□□ -0.9
HDAC1-203ENST00000463172 DEFB1P60022 68 aa9.46□□□□□ -0.9
HDAC1-203ENST00000463172 RHOBP62745 196 aa9.46□□□□□ -0.9
HDAC1-203ENST00000463172 LGALS9CQ6DKI2 356 aa9.46□□□□□ -0.9
HDAC1-203ENST00000463172 ZNF709Q8N972 641 aa9.46□□□□□ -0.9
HDAC1-203ENST00000463172 C20orf173Q96LM9 149 aa9.46□□□□□ -0.9
HDAC1-203ENST00000463172 IGF2BP2-AS1Q96M15 143 aa9.46□□□□□ -0.9
HDAC1-203ENST00000463172 NMES1Q9C002 83 aa9.46□□□□□ -0.9
HDAC1-203ENST00000463172 SLC35B3Q9H1N7 401 aa9.46□□□□□ -0.9
HDAC1-203ENST00000463172 WDR83OSQ9Y284 106 aa9.46□□□□□ -0.9
HDAC1-203ENST00000463172 HYDINQ4G0P3 5121 aa9.46□□□□□ -0.9
HDAC1-203ENST00000463172 IGLL5B9A064 214 aa9.45□□□□□ -0.9
HDAC1-203ENST00000463172 SSNA1O43805 119 aa9.45□□□□□ -0.9
HDAC1-203ENST00000463172 PET100P0DJ07 73 aa9.45□□□□□ -0.9
HDAC1-203ENST00000463172 CXCL3P19876 107 aa9.45□□□□□ -0.9
HDAC1-203ENST00000463172 RPL29P47914 159 aaKnown RBP9.45□□□□□ -0.9
HDAC1-203ENST00000463172 CNN1P51911 297 aaKnown RBP9.45□□□□□ -0.9
HDAC1-203ENST00000463172 IL15RAQ13261 267 aa9.45□□□□□ -0.9
HDAC1-203ENST00000463172 PSG3Q16557 428 aa9.45□□□□□ -0.9
HDAC1-203ENST00000463172 GUK1Q16774 197 aa9.45□□□□□ -0.9
HDAC1-203ENST00000463172 RRN3P1Q2M238 152 aa9.45□□□□□ -0.9
HDAC1-203ENST00000463172 VWC2Q2TAL6 325 aa9.45□□□□□ -0.9
HDAC1-203ENST00000463172 PATE2Q6UY27 113 aa9.45□□□□□ -0.9
HDAC1-203ENST00000463172 RNF182Q8N6D2 247 aa9.45□□□□□ -0.9
HDAC1-203ENST00000463172 C11orf1Q9H5F2 150 aa9.45□□□□□ -0.9
HDAC1-203ENST00000463172 KCNIP2Q9NS61 270 aa9.45□□□□□ -0.9
HDAC1-203ENST00000463172 PXMP4Q9Y6I8 212 aa9.45□□□□□ -0.9
HDAC1-203ENST00000463172 TRAV8-2A0A0B4J237 113 aa9.44□□□□□ -0.9
HDAC1-203ENST00000463172 IGSF23A1L1A6 192 aa9.44□□□□□ -0.9
HDAC1-203ENST00000463172 A8MTW9 85 aa9.44□□□□□ -0.9
HDAC1-203ENST00000463172 FGF7P21781 194 aa9.44□□□□□ -0.9
HDAC1-203ENST00000463172 EMP1P54849 157 aa9.44□□□□□ -0.9
HDAC1-203ENST00000463172 HIST1H1AQ02539 215 aaPredicted RBP9.44□□□□□ -0.9
HDAC1-203ENST00000463172 Q6ZTC4 211 aa9.44□□□□□ -0.9
HDAC1-203ENST00000463172 OR8A1Q8NGG7 326 aa9.44□□□□□ -0.9
HDAC1-203ENST00000463172 CHAC2Q8WUX2 184 aa9.44□□□□□ -0.9
HDAC1-203ENST00000463172 MARVELD1Q9BSK0 173 aa9.44□□□□□ -0.9
HDAC1-203ENST00000463172 SLC39A9Q9NUM3 307 aa9.44□□□□□ -0.9
HDAC1-203ENST00000463172 DEFB131BA0A096LNP1 70 aa9.43□□□□□ -0.9
HDAC1-203ENST00000463172 LOC102723971A0A1B0GUV8 181 aa9.43□□□□□ -0.9
HDAC1-203ENST00000463172 BOLA2-SMG1P6H3BVE0 249 aa9.43□□□□□ -0.9
HDAC1-203ENST00000463172 PRR20EP86478 221 aa9.43□□□□□ -0.9
HDAC1-203ENST00000463172 PRR20CP86479 221 aa9.43□□□□□ -0.9
HDAC1-203ENST00000463172 PRR20DP86480 221 aa9.43□□□□□ -0.9
HDAC1-203ENST00000463172 PRR20BP86481 221 aa9.43□□□□□ -0.9
HDAC1-203ENST00000463172 PRR20AP86496 221 aa9.43□□□□□ -0.9
HDAC1-203ENST00000463172 MIC13Q5XKP0 118 aa9.43□□□□□ -0.9
HDAC1-203ENST00000463172 IGFL4Q6B9Z1 124 aa9.43□□□□□ -0.9
HDAC1-203ENST00000463172 OR11H7Q8NGC8 314 aa9.43□□□□□ -0.9
HDAC1-203ENST00000463172 OR10J6PQ8NGY7 276 aa9.43□□□□□ -0.9
HDAC1-203ENST00000463172 TMEM37Q8WXS4 190 aa9.43□□□□□ -0.9
HDAC1-203ENST00000463172 RPUSD4Q96CM3 377 aaKnown RBP9.43□□□□□ -0.9
HDAC1-203ENST00000463172 C17orf77Q96MU5 243 aa9.43□□□□□ -0.9
HDAC1-203ENST00000463172 RNF126Q9BV68 326 aa9.43□□□□□ -0.9
HDAC1-203ENST00000463172 SIX6O95475 246 aa9.42□□□□□ -0.9
HDAC1-203ENST00000463172 TSPOP30536 169 aa9.42□□□□□ -0.9
HDAC1-203ENST00000463172 IFITM3Q01628 133 aa9.42□□□□□ -0.9
HDAC1-203ENST00000463172 OPCMLQ14982 345 aa9.42□□□□□ -0.9
HDAC1-203ENST00000463172 SPINK13Q1W4C9 94 aa9.42□□□□□ -0.9
HDAC1-203ENST00000463172 C12orf74Q32Q52 190 aa9.42□□□□□ -0.9
HDAC1-203ENST00000463172 LRRC37A5PQ49AS3 106 aa9.42□□□□□ -0.9
HDAC1-203ENST00000463172 AMTNQ6UX39 209 aa9.42□□□□□ -0.9
HDAC1-203ENST00000463172 TMEM256Q8N2U0 113 aa9.42□□□□□ -0.9
HDAC1-203ENST00000463172 ZNF331Q9NQX6 463 aaPredicted RBP9.42□□□□□ -0.9
HDAC1-203ENST00000463172 IGHV4-4A0A075B6R2 117 aa9.41□□□□□ -0.9
HDAC1-203ENST00000463172 C17orf112F2Z3M2 114 aa9.41□□□□□ -0.9
HDAC1-203ENST00000463172 M0R2Z0 102 aa9.41□□□□□ -0.9
HDAC1-203ENST00000463172 MRPS12O15235 138 aaKnown RBP9.41□□□□□ -0.9
HDAC1-203ENST00000463172 C1orf158Q8N1D5 194 aa9.41□□□□□ -0.9
HDAC1-203ENST00000463172 OR5C1Q8NGR4 320 aa9.41□□□□□ -0.9
HDAC1-203ENST00000463172 NIPSNAP3BQ9BS92 247 aa9.41□□□□□ -0.9
HDAC1-203ENST00000463172 NDUFAF3Q9BU61 184 aa9.41□□□□□ -0.9
HDAC1-203ENST00000463172 NPCDR1Q9BY65 106 aa9.41□□□□□ -0.9
HDAC1-203ENST00000463172 CELA1Q9UNI1 258 aa9.41□□□□□ -0.9
HDAC1-203ENST00000463172 ZNF253O75346 499 aa9.4□□□□□ -0.9
HDAC1-203ENST00000463172 IGLC2P0DOY2 106 aa9.4□□□□□ -0.9
HDAC1-203ENST00000463172 CDKN1BP46527 198 aa9.4□□□□□ -0.9
HDAC1-203ENST00000463172 OXA1LQ15070 435 aa9.4□□□□□ -0.9
HDAC1-203ENST00000463172 FAM222AQ5U5X8 452 aa9.4□□□□□ -0.9
HDAC1-203ENST00000463172 FAM210BQ96KR6 192 aa9.4□□□□□ -0.9
HDAC1-203ENST00000463172 DKK2Q9UBU2 259 aa9.4□□□□□ -0.9
HDAC1-203ENST00000463172 APLNQ9ULZ1 77 aa9.4□□□□□ -0.9
HDAC1-203ENST00000463172 NHLH2Q02577 135 aa9.39□□□□□ -0.91
HDAC1-203ENST00000463172 CLINT1Q14677 625 aa9.39□□□□□ -0.91
HDAC1-203ENST00000463172 ZNF767PQ75MW2 155 aa9.39□□□□□ -0.91
HDAC1-203ENST00000463172 THAP6Q8TBB0 222 aa9.39□□□□□ -0.91
HDAC1-203ENST00000463172 PPP1R1CQ8WVI7 109 aa9.39□□□□□ -0.91
HDAC1-203ENST00000463172 LINC01587Q99440 93 aa9.39□□□□□ -0.91
HDAC1-203ENST00000463172 C20orf144Q9BQM9 153 aa9.39□□□□□ -0.91
HDAC1-203ENST00000463172 OR5AC2Q9NZP5 309 aa9.39□□□□□ -0.91
HDAC1-203ENST00000463172 TMEM14CQ9P0S9 112 aa9.39□□□□□ -0.91
HDAC1-203ENST00000463172 PRELID1Q9Y255 219 aa9.39□□□□□ -0.91
HDAC1-203ENST00000463172 YTHDF2Q9Y5A9 579 aaKnown RBP9.39□□□□□ -0.91
HDAC1-203ENST00000463172 TIMM9Q9Y5J7 89 aa9.39□□□□□ -0.91
HDAC1-203ENST00000463172 LYRM9A8MSI8 78 aa9.38□□□□□ -0.91
HDAC1-203ENST00000463172 IFNA5P01569 189 aa9.38□□□□□ -0.91
HDAC1-203ENST00000463172 HIST1H1EP10412 219 aaKnown RBP9.38□□□□□ -0.91
HDAC1-203ENST00000463172 DAD1P61803 113 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms