RNA–Protein interactions for RNA: ENST00000463013.1

KDM3A-208, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 577 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-208ENST00000463013 RAB4BP61018 213 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 IFITM2Q01629 132 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 GUK1Q16774 197 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 AADACL3Q5VUY0 350 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 SPATA8Q6RVD6 105 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 OR2T4Q8NH00 348 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 PFN4Q8NHR9 129 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 DERL1Q9BUN8 251 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 C3orf18Q9UK00 162 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 PIK3C2GO75747 1445 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 CCDC141Q6ZP82 1450 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 DNAH8Q96JB1 4490 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 NFAT5O94916 1531 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 AHCTF1Q8WYP5 2266 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 WNK1Q9H4A3 2382 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 STAB2Q8WWQ8 2551 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 PKHD1L1Q86WI1 4243 aa0.26□□□□□ -2.37
KDM3A-208ENST00000463013 ASXL3Q9C0F0 2248 aa0.25□□□□□ -2.37
KDM3A-208ENST00000463013 CDK5RAP2Q96SN8 1893 aa0.25□□□□□ -2.37
KDM3A-208ENST00000463013 PLXNA4Q9HCM2 1894 aa0.25□□□□□ -2.37
KDM3A-208ENST00000463013 PLXNB2O15031 1838 aa0.25□□□□□ -2.37
KDM3A-208ENST00000463013 DOCK2Q92608 1830 aa0.25□□□□□ -2.37
KDM3A-208ENST00000463013 ZNF236Q9UL36 1845 aa0.25□□□□□ -2.37
KDM3A-208ENST00000463013 CPSF1Q10570 1443 aaKnown RBP0.25□□□□□ -2.37
KDM3A-208ENST00000463013 NAIPQ13075 1403 aa0.25□□□□□ -2.37
KDM3A-208ENST00000463013 CEP162Q5TB80 1403 aa0.25□□□□□ -2.37
KDM3A-208ENST00000463013 ABCC11Q96J66 1382 aa0.25□□□□□ -2.37
KDM3A-208ENST00000463013 VPS13BQ7Z7G8 4022 aa0.25□□□□□ -2.37
KDM3A-208ENST00000463013 EVPLLA8MZ36 301 aa0.25□□□□□ -2.37
KDM3A-208ENST00000463013 UCHL3P15374 230 aa0.25□□□□□ -2.37
KDM3A-208ENST00000463013 SPI1P17947 270 aa0.25□□□□□ -2.37
KDM3A-208ENST00000463013 MYL12AP19105 171 aa0.25□□□□□ -2.37
KDM3A-208ENST00000463013 SKP1P63208 163 aa0.25□□□□□ -2.37
KDM3A-208ENST00000463013 MLLT11Q13015 90 aaPredicted RBP0.25□□□□□ -2.37
KDM3A-208ENST00000463013 MED21Q13503 144 aa0.25□□□□□ -2.37
KDM3A-208ENST00000463013 GRK1Q15835 563 aa0.25□□□□□ -2.37
KDM3A-208ENST00000463013 KCNJ8Q15842 424 aa0.25□□□□□ -2.37
KDM3A-208ENST00000463013 KRTAP20-1Q3LI63 56 aa0.25□□□□□ -2.37
KDM3A-208ENST00000463013 COQ5Q5HYK3 327 aa0.25□□□□□ -2.37
KDM3A-208ENST00000463013 CLVS2Q5SYC1 327 aa0.25□□□□□ -2.37
KDM3A-208ENST00000463013 OOSP2Q86WS3 158 aa0.25□□□□□ -2.37
KDM3A-208ENST00000463013 MCFD2Q8NI22 146 aa0.25□□□□□ -2.37
KDM3A-208ENST00000463013 SCGB3A1Q96QR1 104 aa0.25□□□□□ -2.37
KDM3A-208ENST00000463013 AMELYQ99218 206 aa0.25□□□□□ -2.37
KDM3A-208ENST00000463013 UPF3BQ9BZI7 483 aaKnown RBP0.25□□□□□ -2.37
KDM3A-208ENST00000463013 MACF1Q9UPN3 7388 aaKnown RBP0.25□□□□□ -2.37
KDM3A-208ENST00000463013 ACACAQ13085 2346 aa0.25□□□□□ -2.37
KDM3A-208ENST00000463013 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.25□□□□□ -2.374e-8■■■■■ 32.1
KDM3A-208ENST00000463013 PARP14Q460N5 1801 aa0.24□□□□□ -2.37
KDM3A-208ENST00000463013 NEBP20929 6669 aa0.24□□□□□ -2.37
KDM3A-208ENST00000463013 RGPD2P0DJD1 1756 aa0.24□□□□□ -2.37
KDM3A-208ENST00000463013 UBR2Q8IWV8 1755 aa0.24□□□□□ -2.37
KDM3A-208ENST00000463013 SRRM2Q9UQ35 2752 aaKnown RBP0.24□□□□□ -2.37
KDM3A-208ENST00000463013 DMBT1Q9UGM3 2413 aaPredicted RBP0.24□□□□□ -2.37
KDM3A-208ENST00000463013 CNTRLQ7Z7A1 2325 aa0.24□□□□□ -2.37
KDM3A-208ENST00000463013 CPDO75976 1380 aa0.24□□□□□ -2.37
KDM3A-208ENST00000463013 MTUS2Q5JR59 1369 aa0.24□□□□□ -2.37
KDM3A-208ENST00000463013 ANKRD36BQ8N2N9 1353 aa0.24□□□□□ -2.37
KDM3A-208ENST00000463013 ANKRD30AQ9BXX3 1397 aa0.24□□□□□ -2.37
KDM3A-208ENST00000463013 INMT-MINDY4F8WBC2 141 aa0.24□□□□□ -2.37
KDM3A-208ENST00000463013 ACOX3O15254 700 aa0.24□□□□□ -2.37
KDM3A-208ENST00000463013 CRYGAP11844 174 aa0.24□□□□□ -2.37
KDM3A-208ENST00000463013 MIFP14174 115 aa0.24□□□□□ -2.37
KDM3A-208ENST00000463013 SPANXN5Q5MJ07 72 aa0.24□□□□□ -2.37
KDM3A-208ENST00000463013 ATP6V1G3Q96LB4 118 aa0.24□□□□□ -2.37
KDM3A-208ENST00000463013 WDR61Q9GZS3 305 aaKnown RBP0.24□□□□□ -2.37
KDM3A-208ENST00000463013 HRNRQ86YZ3 2850 aaPredicted RBP0.24□□□□□ -2.37
KDM3A-208ENST00000463013 DOCK3Q8IZD9 2030 aa0.24□□□□□ -2.37
KDM3A-208ENST00000463013 TANC1Q9C0D5 1861 aa0.24□□□□□ -2.37
KDM3A-208ENST00000463013 ZNF106Q9H2Y7 1883 aaKnown RBP0.24□□□□□ -2.37
KDM3A-208ENST00000463013 NUP98P52948 1817 aa0.24□□□□□ -2.37
KDM3A-208ENST00000463013 PSME4Q14997 1843 aa0.24□□□□□ -2.37
KDM3A-208ENST00000463013 ECM29Q5VYK3 1845 aa0.24□□□□□ -2.37
KDM3A-208ENST00000463013 SONP18583 2426 aaKnown RBP0.24□□□□□ -2.37
KDM3A-208ENST00000463013 MUC17Q685J3 4493 aa0.24□□□□□ -2.37
KDM3A-208ENST00000463013 LOC730098B7Z3J9 87 aa0.23□□□□□ -2.37
KDM3A-208ENST00000463013 CLDN25C9JDP6 229 aa0.23□□□□□ -2.37
KDM3A-208ENST00000463013 INE1O15225 51 aa0.23□□□□□ -2.37
KDM3A-208ENST00000463013 APOEP02649 317 aa0.23□□□□□ -2.37
KDM3A-208ENST00000463013 COX5BP10606 129 aa0.23□□□□□ -2.37
KDM3A-208ENST00000463013 HIST1H2BOP23527 126 aa0.23□□□□□ -2.37
KDM3A-208ENST00000463013 HIST1H2BBP33778 126 aa0.23□□□□□ -2.37
KDM3A-208ENST00000463013 BLVRAP53004 296 aa0.23□□□□□ -2.37
KDM3A-208ENST00000463013 HIST1H2BDP58876 126 aa0.23□□□□□ -2.37
KDM3A-208ENST00000463013 NAA20P61599 178 aa0.23□□□□□ -2.37
KDM3A-208ENST00000463013 HIST1H2BCP62807 126 aa0.23□□□□□ -2.37
KDM3A-208ENST00000463013 SRSF6Q13247 344 aaKnown RBP0.23□□□□□ -2.37
KDM3A-208ENST00000463013 HIST2H2BEQ16778 126 aa0.23□□□□□ -2.37
KDM3A-208ENST00000463013 SPANXN3Q5MJ09 141 aa0.23□□□□□ -2.37
KDM3A-208ENST00000463013 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.23□□□□□ -2.37
KDM3A-208ENST00000463013 RPL22L1Q6P5R6 122 aaKnown RBP0.23□□□□□ -2.37
KDM3A-208ENST00000463013 LRRN1Q6UXK5 716 aa0.23□□□□□ -2.37
KDM3A-208ENST00000463013 IQCF2Q8IXL9 164 aa0.23□□□□□ -2.37
KDM3A-208ENST00000463013 PIGXQ8TBF5 258 aa0.23□□□□□ -2.37
KDM3A-208ENST00000463013 HIST1H2BHQ93079 126 aa0.23□□□□□ -2.37
KDM3A-208ENST00000463013 HIST1H2BNQ99877 126 aa0.23□□□□□ -2.37
KDM3A-208ENST00000463013 HIST1H2BMQ99879 126 aa0.23□□□□□ -2.37
KDM3A-208ENST00000463013 SMR3AQ99954 134 aa0.23□□□□□ -2.37
KDM3A-208ENST00000463013 SIPA1L3O60292 1781 aaPredicted RBP0.23□□□□□ -2.37
KDM3A-208ENST00000463013 TNXBP22105 4242 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms