RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	HLA-DMB	P28068	263 aa		7.04	□□□□□ -1.28
PSMD4-208	ENST00000462970	NUTF2	P61970	127 aa	Known RBP	7.04	□□□□□ -1.28
PSMD4-208	ENST00000462970	FFAR4	Q5NUL3	377 aa		7.04	□□□□□ -1.28
PSMD4-208	ENST00000462970	FAM78B	Q5VT40	261 aa		7.04	□□□□□ -1.28
PSMD4-208	ENST00000462970	FOXI2	Q6ZQN5	318 aa		7.04	□□□□□ -1.28
PSMD4-208	ENST00000462970	OR2T35	Q8NGX2	323 aa		7.04	□□□□□ -1.28
PSMD4-208	ENST00000462970	GATAD1	Q8WUU5	269 aa		7.04	□□□□□ -1.28
PSMD4-208	ENST00000462970	C17orf77	Q96MU5	243 aa		7.04	□□□□□ -1.28
PSMD4-208	ENST00000462970	RARRES2	Q99969	163 aa		7.04	□□□□□ -1.28
PSMD4-208	ENST00000462970	WDR61	Q9GZS3	305 aa	Known RBP	7.04	□□□□□ -1.28
PSMD4-208	ENST00000462970	SAV1	Q9H4B6	383 aa	Predicted RBP	7.04	□□□□□ -1.28
PSMD4-208	ENST00000462970	EDA2R	Q9HAV5	297 aa		7.04	□□□□□ -1.28
PSMD4-208	ENST00000462970	TP53TG1	Q9Y2A0	90 aa		7.04	□□□□□ -1.28
PSMD4-208	ENST00000462970	HLA-DRB4	X5D2U9	266 aa		7.04	□□□□□ -1.28
PSMD4-208	ENST00000462970	TENM2	Q9NT68	2774 aa		7.04	□□□□□ -1.28
PSMD4-208	ENST00000462970	KMT2C	Q8NEZ4	4911 aa	Known RBP	7.03	□□□□□ -1.28
PSMD4-208	ENST00000462970		A0A087X0K7	114 aa		7.03	□□□□□ -1.28
PSMD4-208	ENST00000462970	TRAV8-2	A0A0B4J237	113 aa		7.03	□□□□□ -1.28
PSMD4-208	ENST00000462970	DEFB4A	O15263	64 aa		7.03	□□□□□ -1.28
PSMD4-208	ENST00000462970	HIST1H1A	Q02539	215 aa	Predicted RBP	7.03	□□□□□ -1.28
PSMD4-208	ENST00000462970		Q5BKY6	102 aa		7.03	□□□□□ -1.28
PSMD4-208	ENST00000462970	SPATA31B1P	Q5VZV4	182 aa		7.03	□□□□□ -1.28
PSMD4-208	ENST00000462970	LCN15	Q6UWW0	184 aa		7.03	□□□□□ -1.28
PSMD4-208	ENST00000462970	INO80E	Q8NBZ0	244 aa	Predicted RBP	7.03	□□□□□ -1.28
PSMD4-208	ENST00000462970	BLNK	Q8WV28	456 aa		7.03	□□□□□ -1.28
PSMD4-208	ENST00000462970	WFDC1	Q9HC57	220 aa		7.03	□□□□□ -1.28
PSMD4-208	ENST00000462970	PPP1R14D	Q9NXH3	145 aa		7.03	□□□□□ -1.28
PSMD4-208	ENST00000462970	IGHV3OR16-12	A0A075B7B8	117 aa		7.02	□□□□□ -1.29
PSMD4-208	ENST00000462970		A0A0J9YX75	114 aa		7.02	□□□□□ -1.29
PSMD4-208	ENST00000462970	C3orf84	H3BNL1	204 aa		7.02	□□□□□ -1.29
PSMD4-208	ENST00000462970		H3BQ15	152 aa		7.02	□□□□□ -1.29
PSMD4-208	ENST00000462970	SLC17A3	O00476	420 aa		7.02	□□□□□ -1.29
PSMD4-208	ENST00000462970	GIG44	P09565	113 aa	Predicted RBP	7.02	□□□□□ -1.29
PSMD4-208	ENST00000462970	PYY	P10082	97 aa		7.02	□□□□□ -1.29
PSMD4-208	ENST00000462970	RHOB	P62745	196 aa		7.02	□□□□□ -1.29
PSMD4-208	ENST00000462970	PSG9	Q00887	426 aa		7.02	□□□□□ -1.29
PSMD4-208	ENST00000462970	PMS2P11	Q13670	270 aa		7.02	□□□□□ -1.29
PSMD4-208	ENST00000462970	PSG3	Q16557	428 aa		7.02	□□□□□ -1.29
PSMD4-208	ENST00000462970	MIR17HG	Q75NE6	70 aa		7.02	□□□□□ -1.29
PSMD4-208	ENST00000462970	HSD17B11	Q8NBQ5	300 aa		7.02	□□□□□ -1.29
PSMD4-208	ENST00000462970	CHAC2	Q8WUX2	184 aa		7.02	□□□□□ -1.29
PSMD4-208	ENST00000462970	ASB13	Q8WXK3	278 aa		7.02	□□□□□ -1.29
PSMD4-208	ENST00000462970	RPUSD4	Q96CM3	377 aa	Known RBP	7.02	□□□□□ -1.29
PSMD4-208	ENST00000462970	C1QTNF4	Q9BXJ3	329 aa		7.02	□□□□□ -1.29
PSMD4-208	ENST00000462970	MFF	Q9GZY8	342 aa		7.02	□□□□□ -1.29
PSMD4-208	ENST00000462970	SLC35B3	Q9H1N7	401 aa		7.02	□□□□□ -1.29
PSMD4-208	ENST00000462970	TIMM9	Q9Y5J7	89 aa		7.02	□□□□□ -1.29
PSMD4-208	ENST00000462970	RFNG	Q9Y644	331 aa		7.02	□□□□□ -1.29
PSMD4-208	ENST00000462970	RYR3	Q15413	4870 aa		7.02	□□□□□ -1.29
PSMD4-208	ENST00000462970	CXorf65	A6NEN9	183 aa		7.01	□□□□□ -1.29
PSMD4-208	ENST00000462970	ZNF705F	A8MVS1	300 aa	Predicted RBP	7.01	□□□□□ -1.29
PSMD4-208	ENST00000462970	SMLR1	H3BR10	107 aa		7.01	□□□□□ -1.29
PSMD4-208	ENST00000462970	MRPS12	O15235	138 aa	Known RBP	7.01	□□□□□ -1.29
PSMD4-208	ENST00000462970	OR7C2	O60412	319 aa		7.01	□□□□□ -1.29
PSMD4-208	ENST00000462970	DUSP14	O95147	198 aa	Known RBP	7.01	□□□□□ -1.29
PSMD4-208	ENST00000462970	CNN1	P51911	297 aa	Known RBP	7.01	□□□□□ -1.29
PSMD4-208	ENST00000462970	TMEM41B	Q5BJD5	291 aa		7.01	□□□□□ -1.29
PSMD4-208	ENST00000462970	IL17D	Q8TAD2	202 aa		7.01	□□□□□ -1.29
PSMD4-208	ENST00000462970	SLC50A1	Q9BRV3	221 aa		7.01	□□□□□ -1.29
PSMD4-208	ENST00000462970	ZNF331	Q9NQX6	463 aa	Predicted RBP	7.01	□□□□□ -1.29
PSMD4-208	ENST00000462970	EIF3G	O75821	320 aa	Known RBP eCLIP	7	□□□□□ -1.29
PSMD4-208	ENST00000462970	OR10J4	P0C629	311 aa		7	□□□□□ -1.29
PSMD4-208	ENST00000462970	IGLC2	P0DOY2	106 aa		7	□□□□□ -1.29
PSMD4-208	ENST00000462970	CXCL2	P19875	107 aa		7	□□□□□ -1.29
PSMD4-208	ENST00000462970	GUK1	Q16774	197 aa		7	□□□□□ -1.29
PSMD4-208	ENST00000462970	FAM122C	Q6P4D5	195 aa		7	□□□□□ -1.29
PSMD4-208	ENST00000462970	AQP10	Q96PS8	301 aa		7	□□□□□ -1.29
PSMD4-208	ENST00000462970	TMEM208	Q9BTX3	173 aa		7	□□□□□ -1.29
PSMD4-208	ENST00000462970	PAXX	Q9BUH6	204 aa		7	□□□□□ -1.29
PSMD4-208	ENST00000462970	SLC25A2	Q9BXI2	301 aa		7	□□□□□ -1.29
PSMD4-208	ENST00000462970	MRPL32	Q9BYC8	188 aa	Known RBP	7	□□□□□ -1.29
PSMD4-208	ENST00000462970	HRH4	Q9H3N8	390 aa		7	□□□□□ -1.29
PSMD4-208	ENST00000462970	ZNF586	Q9NXT0	402 aa		7	□□□□□ -1.29
PSMD4-208	ENST00000462970	FUT9	Q9Y231	359 aa		7	□□□□□ -1.29
PSMD4-208	ENST00000462970	BORCS7-ASMT	A0A0B4J1R7	106 aa		6.99	□□□□□ -1.29
PSMD4-208	ENST00000462970	IGHV4-28	A0A0C4DH34	117 aa		6.99	□□□□□ -1.29
PSMD4-208	ENST00000462970		A0A1W2PPV4	95 aa		6.99	□□□□□ -1.29
PSMD4-208	ENST00000462970		M0R2Z0	102 aa		6.99	□□□□□ -1.29
PSMD4-208	ENST00000462970	ARPC5	O15511	151 aa		6.99	□□□□□ -1.29
PSMD4-208	ENST00000462970	HIST1H1E	P10412	219 aa	Known RBP	6.99	□□□□□ -1.29
PSMD4-208	ENST00000462970	RAB2A	P61019	212 aa		6.99	□□□□□ -1.29
PSMD4-208	ENST00000462970	ZNF266	Q14584	549 aa		6.99	□□□□□ -1.29
PSMD4-208	ENST00000462970	SPINK13	Q1W4C9	94 aa		6.99	□□□□□ -1.29
PSMD4-208	ENST00000462970	ACOT6	Q3I5F7	207 aa	Predicted RBP	6.99	□□□□□ -1.29
PSMD4-208	ENST00000462970	CASC10	Q5T4H9	136 aa		6.99	□□□□□ -1.29
PSMD4-208	ENST00000462970	OR8A1	Q8NGG7	326 aa		6.99	□□□□□ -1.29
PSMD4-208	ENST00000462970	OR10J6P	Q8NGY7	276 aa		6.99	□□□□□ -1.29
PSMD4-208	ENST00000462970	OR51M1	Q9H341	326 aa		6.99	□□□□□ -1.29
PSMD4-208	ENST00000462970	TMEM14C	Q9P0S9	112 aa		6.99	□□□□□ -1.29
PSMD4-208	ENST00000462970	TNFSF18	Q9UNG2	199 aa		6.99	□□□□□ -1.29
PSMD4-208	ENST00000462970	GOLT1B	Q9Y3E0	138 aa		6.99	□□□□□ -1.29
PSMD4-208	ENST00000462970	TRBV19	A0A075B6N1	114 aa		6.98	□□□□□ -1.29
PSMD4-208	ENST00000462970	PRAC2	D3DTV9	90 aa		6.98	□□□□□ -1.29
PSMD4-208	ENST00000462970	HMGB3	O15347	200 aa	Known RBP	6.98	□□□□□ -1.29
PSMD4-208	ENST00000462970	NBEAP1	P0C6P0	100 aa		6.98	□□□□□ -1.29
PSMD4-208	ENST00000462970	EMP1	P54849	157 aa		6.98	□□□□□ -1.29
PSMD4-208	ENST00000462970	TAS2R45	P59539	299 aa		6.98	□□□□□ -1.29
PSMD4-208	ENST00000462970	UBE2L3	P68036	154 aa	Known RBP	6.98	□□□□□ -1.29
PSMD4-208	ENST00000462970	KHDC3L	Q587J8	217 aa		6.98	□□□□□ -1.29
PSMD4-208	ENST00000462970	BAP18	Q8IXM2	172 aa		6.98	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms