RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.75□□□□□ -1.65
SF3B1-206ENST00000462613 TMUB2Q71RG4 321 aa4.75□□□□□ -1.65
SF3B1-206ENST00000462613 APRG1Q8IVJ8 170 aa4.75□□□□□ -1.65
SF3B1-206ENST00000462613 IQCF2Q8IXL9 164 aa4.75□□□□□ -1.65
SF3B1-206ENST00000462613 ZNF738Q8NE65 137 aa4.75□□□□□ -1.65
SF3B1-206ENST00000462613 OR11H4Q8NGC9 324 aa4.75□□□□□ -1.65
SF3B1-206ENST00000462613 STOML3Q8TAV4 291 aa4.75□□□□□ -1.65
SF3B1-206ENST00000462613 BLNKQ8WV28 456 aa4.75□□□□□ -1.65
SF3B1-206ENST00000462613 SPATA25Q9BR10 227 aa4.75□□□□□ -1.65
SF3B1-206ENST00000462613 PAXXQ9BUH6 204 aa4.75□□□□□ -1.65
SF3B1-206ENST00000462613 C1QTNF4Q9BXJ3 329 aa4.75□□□□□ -1.65
SF3B1-206ENST00000462613 OR51M1Q9H341 326 aa4.75□□□□□ -1.65
SF3B1-206ENST00000462613 C19orf73Q9NVV2 129 aa4.75□□□□□ -1.65
SF3B1-206ENST00000462613 PPP1R14DQ9NXH3 145 aa4.75□□□□□ -1.65
SF3B1-206ENST00000462613 PRELID1Q9Y255 219 aa4.75□□□□□ -1.65
SF3B1-206ENST00000462613 FBN3Q75N90 2809 aa4.75□□□□□ -1.65
SF3B1-206ENST00000462613 TRAV5A0A0B4J249 113 aa4.74□□□□□ -1.65
SF3B1-206ENST00000462613 KIR2DL5BA0A0G2JN68 375 aa4.74□□□□□ -1.65
SF3B1-206ENST00000462613 KIR2DL5BA0A0G2JPC4 375 aa4.74□□□□□ -1.65
SF3B1-206ENST00000462613 CTXND1A0A1B0GTU2 59 aa4.74□□□□□ -1.65
SF3B1-206ENST00000462613 TEX46H3BTG2 121 aa4.74□□□□□ -1.65
SF3B1-206ENST00000462613 CXorf1O96002 111 aa4.74□□□□□ -1.65
SF3B1-206ENST00000462613 NBEAP1P0C6P0 100 aa4.74□□□□□ -1.65
SF3B1-206ENST00000462613 SEC11BP0C7V7 166 aa4.74□□□□□ -1.65
SF3B1-206ENST00000462613 IGLC2P0DOY2 106 aa4.74□□□□□ -1.65
SF3B1-206ENST00000462613 RPL35AP18077 110 aaKnown RBP4.74□□□□□ -1.65
SF3B1-206ENST00000462613 CSN1S1P47710 185 aa4.74□□□□□ -1.65
SF3B1-206ENST00000462613 RAB2AP61019 212 aa4.74□□□□□ -1.65
SF3B1-206ENST00000462613 GCSAMLQ5JQS6 135 aa4.74□□□□□ -1.65
SF3B1-206ENST00000462613 ACTL10Q5JWF8 245 aa4.74□□□□□ -1.65
SF3B1-206ENST00000462613 MORN5Q5VZ52 161 aa4.74□□□□□ -1.65
SF3B1-206ENST00000462613 FOXI2Q6ZQN5 318 aa4.74□□□□□ -1.65
SF3B1-206ENST00000462613 MIR17HGQ75NE6 70 aa4.74□□□□□ -1.65
SF3B1-206ENST00000462613 SLC51BQ86UW2 128 aa4.74□□□□□ -1.65
SF3B1-206ENST00000462613 BAP18Q8IXM2 172 aa4.74□□□□□ -1.65
SF3B1-206ENST00000462613 KIR2DL5AQ8N109 375 aa4.74□□□□□ -1.65
SF3B1-206ENST00000462613 OR4B1Q8NGF8 309 aa4.74□□□□□ -1.65
SF3B1-206ENST00000462613 OR10J6PQ8NGY7 276 aa4.74□□□□□ -1.65
SF3B1-206ENST00000462613 KIR2DL5BQ8NHK3 375 aa4.74□□□□□ -1.65
SF3B1-206ENST00000462613 RNF141Q8WVD5 230 aa4.74□□□□□ -1.65
SF3B1-206ENST00000462613 WFDC10AQ9H1F0 79 aa4.74□□□□□ -1.65
SF3B1-206ENST00000462613 TRBV19A0A075B6N1 114 aa4.73□□□□□ -1.65
SF3B1-206ENST00000462613 SOCS3O14543 225 aa4.73□□□□□ -1.65
SF3B1-206ENST00000462613 AMBPP02760 352 aa4.73□□□□□ -1.65
SF3B1-206ENST00000462613 OR10J4P0C629 311 aa4.73□□□□□ -1.65
SF3B1-206ENST00000462613 PYYP10082 97 aa4.73□□□□□ -1.65
SF3B1-206ENST00000462613 HLA-DRB4P13762 266 aa4.73□□□□□ -1.65
SF3B1-206ENST00000462613 RAB5CP51148 216 aa4.73□□□□□ -1.65
SF3B1-206ENST00000462613 PSG3Q16557 428 aa4.73□□□□□ -1.65
SF3B1-206ENST00000462613 LGALSLQ3ZCW2 172 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-206ENST00000462613 DPPA3Q6W0C5 159 aa4.73□□□□□ -1.65
SF3B1-206ENST00000462613 LYPD1Q8N2G4 141 aa4.73□□□□□ -1.65
SF3B1-206ENST00000462613 FAM24BQ8N5W8 94 aa4.73□□□□□ -1.65
SF3B1-206ENST00000462613 CMTM2Q8TAZ6 248 aa4.73□□□□□ -1.65
SF3B1-206ENST00000462613 RAB24Q969Q5 203 aa4.73□□□□□ -1.65
SF3B1-206ENST00000462613 MRPL53Q96EL3 112 aaKnown RBP4.73□□□□□ -1.65
SF3B1-206ENST00000462613 SLC25A2Q9BXI2 301 aa4.73□□□□□ -1.65
SF3B1-206ENST00000462613 CSTL1Q9H114 145 aa4.73□□□□□ -1.65
SF3B1-206ENST00000462613 SH3BGRL3Q9H299 93 aa4.73□□□□□ -1.65
SF3B1-206ENST00000462613 SAV1Q9H4B6 383 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-206ENST00000462613 ZNF331Q9NQX6 463 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-206ENST00000462613 TMEM167BQ9NRX6 74 aa4.73□□□□□ -1.65
SF3B1-206ENST00000462613 HLA-DRB4X5D2U9 266 aa4.73□□□□□ -1.65
SF3B1-206ENST00000462613 DNHD1Q96M86 4753 aa4.73□□□□□ -1.65
SF3B1-206ENST00000462613 A0A1B0GVG6 124 aa4.72□□□□□ -1.65
SF3B1-206ENST00000462613 RBMY1BA6NDE4 496 aaKnown RBP4.72□□□□□ -1.65
SF3B1-206ENST00000462613 RBMY1EA6NEQ0 496 aaKnown RBP4.72□□□□□ -1.65
SF3B1-206ENST00000462613 KNCNA6PVL3 124 aa4.72□□□□□ -1.65
SF3B1-206ENST00000462613 H3BQ15 152 aa4.72□□□□□ -1.65
SF3B1-206ENST00000462613 H3BTX0 84 aa4.72□□□□□ -1.65
SF3B1-206ENST00000462613 K7EQM0 130 aa4.72□□□□□ -1.65
SF3B1-206ENST00000462613 MRPS12O15235 138 aaKnown RBP4.72□□□□□ -1.65
SF3B1-206ENST00000462613 CA1P00915 261 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-206ENST00000462613 SNRPCP09234 159 aaKnown RBP4.72□□□□□ -1.65
SF3B1-206ENST00000462613 RBMY1DP0C7P1 496 aaKnown RBP4.72□□□□□ -1.65
SF3B1-206ENST00000462613 STAG3L2P0CL84 134 aa4.72□□□□□ -1.65
SF3B1-206ENST00000462613 STAG3L3P0CL85 134 aa4.72□□□□□ -1.65
SF3B1-206ENST00000462613 ARL14EPLP0DKL9 152 aa4.72□□□□□ -1.65
SF3B1-206ENST00000462613 TSPOP30536 169 aa4.72□□□□□ -1.65
SF3B1-206ENST00000462613 RANP62826 216 aaKnown RBP4.72□□□□□ -1.65
SF3B1-206ENST00000462613 HIST1H1AQ02539 215 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-206ENST00000462613 ICAM4Q14773 271 aa4.72□□□□□ -1.65
SF3B1-206ENST00000462613 ZNF124Q15973 351 aa4.72□□□□□ -1.65
SF3B1-206ENST00000462613 HAGHQ16775 308 aa4.72□□□□□ -1.65
SF3B1-206ENST00000462613 Q6ZWC4 215 aa4.72□□□□□ -1.65
SF3B1-206ENST00000462613 TRPT1Q86TN4 253 aaKnown RBP4.72□□□□□ -1.65
SF3B1-206ENST00000462613 RPP25LQ8N5L8 163 aaKnown RBP4.72□□□□□ -1.65
SF3B1-206ENST00000462613 RNF182Q8N6D2 247 aa4.72□□□□□ -1.65
SF3B1-206ENST00000462613 RXFP4Q8TDU9 374 aa4.72□□□□□ -1.65
SF3B1-206ENST00000462613 TMED6Q8WW62 240 aa4.72□□□□□ -1.65
SF3B1-206ENST00000462613 RPUSD4Q96CM3 377 aaKnown RBP4.72□□□□□ -1.65
SF3B1-206ENST00000462613 FAM167A-AS1Q96KT0 104 aa4.72□□□□□ -1.65
SF3B1-206ENST00000462613 CLUHP3Q96NS8 147 aa4.72□□□□□ -1.65
SF3B1-206ENST00000462613 RCHY1Q96PM5 261 aa4.72□□□□□ -1.65
SF3B1-206ENST00000462613 ASCL2Q99929 193 aa4.72□□□□□ -1.65
SF3B1-206ENST00000462613 NKX6-2Q9C056 277 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-206ENST00000462613 CYTL1Q9NRR1 136 aa4.72□□□□□ -1.65
SF3B1-206ENST00000462613 ZNF586Q9NXT0 402 aa4.72□□□□□ -1.65
SF3B1-206ENST00000462613 A0A0J9YX75 114 aa4.71□□□□□ -1.66
SF3B1-206ENST00000462613 MAP1LC3B2A6NCE7 125 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms