RNA–Protein interactions for RNA: ENST00000462429.1

VPS41-210, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 3

Gene VPS41, Length 347 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-210ENST00000462429 NKX2-5P52952 324 aaPredicted RBP2.15□□□□□ -2.07
VPS41-210ENST00000462429 RBM11P57052 281 aaKnown RBP2.15□□□□□ -2.07
VPS41-210ENST00000462429 KLF3P57682 345 aaPredicted RBP2.15□□□□□ -2.07
VPS41-210ENST00000462429 KRTAP10-1P60331 282 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 RAB2AP61019 212 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 OR8G1Q15617 311 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 LGALSLQ3ZCW2 172 aaPredicted RBP2.15□□□□□ -2.07
VPS41-210ENST00000462429 CLLU1Q5K131 121 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 TIMM23BQ5SRD1 257 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 ZNF660Q6AZW8 331 aaPredicted RBP2.15□□□□□ -2.07
VPS41-210ENST00000462429 LAMTOR1Q6IAA8 161 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 OR10K2Q6IF99 312 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 Q6ZS92 163 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 KRTAP5-2Q701N4 177 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 SLC25A26Q70HW3 274 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 ADM2Q7Z4H4 148 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 C6orf201Q7Z4U5 140 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 FAM19A3Q7Z5A8 133 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 PDZD9Q8IXQ8 264 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 C9orf62Q8N4C0 152 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 OR4S1Q8NGB4 309 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 OR5D18Q8NGL1 313 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 OR10J5Q8NHC4 309 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 CASTOR1Q8WTX7 329 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 PPP1R1CQ8WVI7 109 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 OR5P3Q8WZ94 311 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 GALMQ96C23 342 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 ABHD14BQ96IU4 210 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 C2orf50Q96LR7 162 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 FXYD6Q9H0Q3 95 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 MED9Q9NWA0 146 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 ZNF492Q9P255 531 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 ANAPC10Q9UM13 185 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 TBL2Q9Y4P3 447 aaKnown RBP2.15□□□□□ -2.07
VPS41-210ENST00000462429 RBM7Q9Y580 266 aaKnown RBP2.15□□□□□ -2.07
VPS41-210ENST00000462429 AHCTF1Q8WYP5 2266 aa2.15□□□□□ -2.07
VPS41-210ENST00000462429 NCOA6Q14686 2063 aaPredicted RBP2.14□□□□□ -2.07
VPS41-210ENST00000462429 KIAA1549Q9HCM3 1950 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 DNAJC13O75165 2243 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 UNC80Q8N2C7 3258 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 IGHV2-26A0A0B4J1V2 119 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 A0A0B4J2C4 111 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 LINC00862A6NCI5 91 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 A6NED7 52 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 ZNF729A6NN14 1252 aaPredicted RBP2.14□□□□□ -2.07
VPS41-210ENST00000462429 IQCF6A8MYZ5 107 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 EEF1E1-BLOC1S5C9J1V9 151 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 GPR31O00270 319 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 GEMIN2O14893 280 aaKnown RBP2.14□□□□□ -2.07
VPS41-210ENST00000462429 CRXO43186 299 aaPredicted RBP2.14□□□□□ -2.07
VPS41-210ENST00000462429 LYZL6O75951 148 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 MPC2O95563 127 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 CDS2O95674 445 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 PPYP01298 95 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 IGKV1D-33P01593 117 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 IGKV1-33P01594 117 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 SLC25A6P12236 298 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 PTHLHP12272 177 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 ZNF35P13682 527 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 GLRXP35754 106 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 CD200P41217 278 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 RAB5CP51148 216 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 IDH3GP51553 393 aaPredicted RBP2.14□□□□□ -2.07
VPS41-210ENST00000462429 H2BFSP57053 126 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 PIGPP57054 158 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 CATR1Q13166 79 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 PPP1R1AQ13522 171 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 SMIM21Q3B7S5 101 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 HAGHLQ6PII5 290 aaPredicted RBP2.14□□□□□ -2.07
VPS41-210ENST00000462429 LHFPL1Q86WI0 220 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 KCNRGQ8N5I3 272 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 C1orf64Q8NEQ6 169 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 OR13C8Q8NGS7 320 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 OR10K1Q8NGX5 313 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 RNASE11Q8TAA1 199 aaKnown RBP2.14□□□□□ -2.07
VPS41-210ENST00000462429 CMBLQ96DG6 245 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 OR2V2Q96R30 315 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 ADAT1Q9BUB4 502 aaKnown RBP2.14□□□□□ -2.07
VPS41-210ENST00000462429 ZNF471Q9BX82 626 aaPredicted RBP2.14□□□□□ -2.07
VPS41-210ENST00000462429 NAA60Q9H7X0 242 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 SLC2A9Q9NRM0 540 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 ZNF586Q9NXT0 402 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 GSKIPQ9P0R6 139 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 TAAR3PQ9P1P4 343 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 ZNF230Q9UIE0 474 aaPredicted RBP2.14□□□□□ -2.07
VPS41-210ENST00000462429 AK3Q9UIJ7 227 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 TRAPPC2LQ9UL33 140 aa2.14□□□□□ -2.07
VPS41-210ENST00000462429 TRBV6-7A0A0A0MS04 114 aa2.13□□□□□ -2.07
VPS41-210ENST00000462429 C3orf85A0A1B0GTC6 90 aa2.13□□□□□ -2.07
VPS41-210ENST00000462429 TMEM30CPA0ZSE6 113 aa2.13□□□□□ -2.07
VPS41-210ENST00000462429 CRYM-AS1A6NIL9 109 aa2.13□□□□□ -2.07
VPS41-210ENST00000462429 A8MWP4 228 aa2.13□□□□□ -2.07
VPS41-210ENST00000462429 H0Y980 276 aa2.13□□□□□ -2.07
VPS41-210ENST00000462429 SDCBPO00560 298 aaPredicted RBP2.13□□□□□ -2.07
VPS41-210ENST00000462429 TNRC18O15417 2968 aaPredicted RBP2.13□□□□□ -2.07
VPS41-210ENST00000462429 FSTL3O95633 263 aa2.13□□□□□ -2.07
VPS41-210ENST00000462429 NAPSAO96009 420 aa2.13□□□□□ -2.07
VPS41-210ENST00000462429 RPL12P30050 165 aaKnown RBP2.13□□□□□ -2.07
VPS41-210ENST00000462429 FXYD4P59646 89 aa2.13□□□□□ -2.07
VPS41-210ENST00000462429 S100A10P60903 97 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms