RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 METTL15P1P0C7V9 234 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 RD3LP0DJH9 198 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 PVALBP20472 110 aaPredicted RBP3.53□□□□□ -1.84
CSMD3-205ENST00000462254 RPL12P30050 165 aaKnown RBP3.53□□□□□ -1.84
CSMD3-205ENST00000462254 CAV2P51636 162 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 CRIP2P52943 208 aaPredicted RBP3.53□□□□□ -1.84
CSMD3-205ENST00000462254 TAS2R30P59541 319 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 B2MP61769 119 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 BLCAPP62952 87 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 BSXQ3C1V8 233 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 SPANXN5Q5MJ07 72 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 TMEM14EPQ6UXP3 125 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 SSX7Q7RTT5 188 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 C9orf62Q8N4C0 152 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 TMEM86BQ8N661 226 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 TMEM252Q8N6L7 170 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 SGMS2Q8NHU3 365 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 SPATA3Q8NHX4 192 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 TAF15Q92804 592 aaKnown RBP eCLIP3.53□□□□□ -1.84
CSMD3-205ENST00000462254 SMIM8Q96KF7 97 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 HYLS1Q96M11 299 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 AQP10Q96PS8 301 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 P2RX4Q99571 388 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 PARD6GQ9BYG4 376 aaPredicted RBP3.53□□□□□ -1.84
CSMD3-205ENST00000462254 ZNF702PQ9H963 129 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 PARP11Q9NR21 331 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 LINC00527Q9UJ94 153 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 HSPB11Q9Y547 144 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 WSB1Q9Y6I7 421 aa3.53□□□□□ -1.84
CSMD3-205ENST00000462254 MTORP42345 2549 aa3.52□□□□□ -1.85
CSMD3-205ENST00000462254 IGKV2D-30A0A075B6S6 120 aa3.52□□□□□ -1.85
CSMD3-205ENST00000462254 A0A087WW49 117 aa3.52□□□□□ -1.85
CSMD3-205ENST00000462254 G3V318 75 aa3.52□□□□□ -1.85
CSMD3-205ENST00000462254 M0QZK8 103 aa3.52□□□□□ -1.85
CSMD3-205ENST00000462254 CST7O76096 145 aa3.52□□□□□ -1.85
CSMD3-205ENST00000462254 CNIH1O95406 144 aa3.52□□□□□ -1.85
CSMD3-205ENST00000462254 IFNA10P01566 189 aa3.52□□□□□ -1.85
CSMD3-205ENST00000462254 OR13C7P0DN81 318 aa3.52□□□□□ -1.85
CSMD3-205ENST00000462254 NPY1RP25929 384 aa3.52□□□□□ -1.85
CSMD3-205ENST00000462254 AP2S1P53680 142 aaPredicted RBP3.52□□□□□ -1.85
CSMD3-205ENST00000462254 TAS2R60P59551 318 aa3.52□□□□□ -1.85
CSMD3-205ENST00000462254 UBA52P62987 128 aaKnown RBP3.52□□□□□ -1.85
CSMD3-205ENST00000462254 DEFA5Q01523 94 aa3.52□□□□□ -1.85
CSMD3-205ENST00000462254 OR2F1Q13607 317 aa3.52□□□□□ -1.85
CSMD3-205ENST00000462254 ZNF345Q14585 488 aa3.52□□□□□ -1.85
CSMD3-205ENST00000462254 TAL2Q16559 108 aa3.52□□□□□ -1.85
CSMD3-205ENST00000462254 C2orf83Q53S99 150 aa3.52□□□□□ -1.85
CSMD3-205ENST00000462254 UNQ5815/PRO19632Q6UWF5 114 aa3.52□□□□□ -1.85
CSMD3-205ENST00000462254 ACOT7LQ6ZUV0 252 aa3.52□□□□□ -1.85
CSMD3-205ENST00000462254 SLC35E3Q7Z769 313 aa3.52□□□□□ -1.85
CSMD3-205ENST00000462254 STPG2Q8N412 459 aa3.52□□□□□ -1.85
CSMD3-205ENST00000462254 KCNRGQ8N5I3 272 aa3.52□□□□□ -1.85
CSMD3-205ENST00000462254 LFNGQ8NES3 379 aa3.52□□□□□ -1.85
CSMD3-205ENST00000462254 ZNF418Q8TF45 676 aaPredicted RBP3.52□□□□□ -1.85
CSMD3-205ENST00000462254 NOL4LQ96MY1 436 aaPredicted RBP3.52□□□□□ -1.85
CSMD3-205ENST00000462254 CIB3Q96Q77 187 aaPredicted RBP3.52□□□□□ -1.85
CSMD3-205ENST00000462254 KRTAP9-8Q9BYQ0 159 aa3.52□□□□□ -1.85
CSMD3-205ENST00000462254 SMIM3Q9BZL3 60 aa3.52□□□□□ -1.85
CSMD3-205ENST00000462254 ENY2Q9NPA8 101 aa3.52□□□□□ -1.85
CSMD3-205ENST00000462254 CACFD1Q9UGQ2 172 aa3.52□□□□□ -1.85
CSMD3-205ENST00000462254 GOLT1BQ9Y3E0 138 aa3.52□□□□□ -1.85
CSMD3-205ENST00000462254 IGLV11-55A0A075B6I3 123 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 TRAV41A0A0B4J266 112 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 A0A0D9SG52 128 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 SMIM1B2RUZ4 78 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 K7EN84 100 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 BCL2L11O43521 198 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 GATCO43716 136 aaKnown RBP3.51□□□□□ -1.85
CSMD3-205ENST00000462254 PRH1P02810 166 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 OR8U8P0C7N1 319 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 CT45A10P0DMU9 189 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 S100A11P31949 105 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 SNCAP37840 140 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 SULT1A1P50225 295 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 ERHP84090 104 aaKnown RBP3.51□□□□□ -1.85
CSMD3-205ENST00000462254 SLC38A11Q08AI6 406 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 AKIRIN2Q53H80 203 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 ACTL10Q5JWF8 245 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 C10orf99Q6UWK7 81 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 TMUB2Q71RG4 321 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 HSD17B13Q7Z5P4 300 aaPredicted RBP3.51□□□□□ -1.85
CSMD3-205ENST00000462254 Q8N2B8 174 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 TTC9CQ8N5M4 171 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 OR5C1Q8NGR4 320 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 PRAC1Q96KF2 57 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 RSG1Q9BU20 258 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 SLC25A31Q9H0C2 315 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 ARL6Q9H0F7 186 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 WFDC1Q9HC57 220 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 CYTL1Q9NRR1 136 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 MRPL36Q9P0J6 103 aaKnown RBP3.51□□□□□ -1.85
CSMD3-205ENST00000462254 PRELID1Q9Y255 219 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 F11RQ9Y624 299 aaKnown RBP3.51□□□□□ -1.85
CSMD3-205ENST00000462254 U3KQ87 197 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 NF1P21359 2839 aa3.51□□□□□ -1.85
CSMD3-205ENST00000462254 IGKV1OR2-108A0A075B7D4 117 aa3.5□□□□□ -1.85
CSMD3-205ENST00000462254 IGHV3-21A0A0B4J1V1 117 aa3.5□□□□□ -1.85
CSMD3-205ENST00000462254 SEC14L6B5MCN3 397 aa3.5□□□□□ -1.85
CSMD3-205ENST00000462254 I3L2K1 104 aa3.5□□□□□ -1.85
CSMD3-205ENST00000462254 K7EIM0 57 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms