RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 MUCL1Q96DR8 90 aa1.06□□□□□ -2.24
VCL-203ENST00000461383 BORCS8Q96FH0 119 aa1.06□□□□□ -2.24
VCL-203ENST00000461383 ORMDL1Q9P0S3 153 aa1.06□□□□□ -2.24
VCL-203ENST00000461383 OR52A1Q9UKL2 312 aa1.06□□□□□ -2.24
VCL-203ENST00000461383 EML5Q05BV3 1969 aa1.06□□□□□ -2.24
VCL-203ENST00000461383 FREM3P0C091 2139 aa1.06□□□□□ -2.24
VCL-203ENST00000461383 TNS3Q68CZ2 1445 aa1.06□□□□□ -2.24
VCL-203ENST00000461383 NCAPD3P42695 1498 aa1.05□□□□□ -2.24
VCL-203ENST00000461383 ALPK3Q96L96 1907 aa1.05□□□□□ -2.24
VCL-203ENST00000461383 MCM3APO60318 1980 aa1.05□□□□□ -2.24
VCL-203ENST00000461383 PBRM1Q86U86 1689 aa1.05□□□□□ -2.24
VCL-203ENST00000461383 TRAV5A0A0B4J249 113 aa1.05□□□□□ -2.24
VCL-203ENST00000461383 E7EUB6 86 aa1.05□□□□□ -2.24
VCL-203ENST00000461383 PGRMC1O00264 195 aaKnown RBP1.05□□□□□ -2.24
VCL-203ENST00000461383 CCL16O15467 120 aa1.05□□□□□ -2.24
VCL-203ENST00000461383 HBBP68871 147 aa1.05□□□□□ -2.24
VCL-203ENST00000461383 GDF5OSQ5U4N7 250 aa1.05□□□□□ -2.24
VCL-203ENST00000461383 SMIM15Q7Z3B0 74 aa1.05□□□□□ -2.24
VCL-203ENST00000461383 TEN1Q86WV5 123 aa1.05□□□□□ -2.24
VCL-203ENST00000461383 GKN2Q86XP6 184 aa1.05□□□□□ -2.24
VCL-203ENST00000461383 ISOC1Q96CN7 298 aa1.05□□□□□ -2.24
VCL-203ENST00000461383 LINC00526Q96FQ7 95 aa1.05□□□□□ -2.24
VCL-203ENST00000461383 OBSCN-AS1Q96MR7 158 aa1.05□□□□□ -2.24
VCL-203ENST00000461383 CCDC32Q9BV29 185 aa1.05□□□□□ -2.24
VCL-203ENST00000461383 CENPHQ9H3R5 247 aa1.05□□□□□ -2.24
VCL-203ENST00000461383 CRCT1Q9UGL9 99 aa1.05□□□□□ -2.24
VCL-203ENST00000461383 CHCHD2Q9Y6H1 151 aaPredicted RBP1.05□□□□□ -2.24
VCL-203ENST00000461383 LAMB4A4D0S4 1761 aa1.05□□□□□ -2.24
VCL-203ENST00000461383 TANC2Q9HCD6 1990 aa1.05□□□□□ -2.24
VCL-203ENST00000461383 MGAMO43451 1857 aa1.04□□□□□ -2.24
VCL-203ENST00000461383 F8W1H4 67 aa1.04□□□□□ -2.24
VCL-203ENST00000461383 LYRM1O43325 122 aa1.04□□□□□ -2.24
VCL-203ENST00000461383 IFNA21P01568 189 aa1.04□□□□□ -2.24
VCL-203ENST00000461383 MT-ND6P03923 174 aa1.04□□□□□ -2.24
VCL-203ENST00000461383 ZNF25P17030 456 aaPredicted RBP1.04□□□□□ -2.24
VCL-203ENST00000461383 RPL35P42766 123 aaKnown RBP1.04□□□□□ -2.24
VCL-203ENST00000461383 C1orf134Q5TEV5 83 aa1.04□□□□□ -2.24
VCL-203ENST00000461383 PATE2Q6UY27 113 aa1.04□□□□□ -2.24
VCL-203ENST00000461383 LRRC18Q8N456 261 aa1.04□□□□□ -2.24
VCL-203ENST00000461383 HYLS1Q96M11 299 aa1.04□□□□□ -2.24
VCL-203ENST00000461383 OR2H1Q9GZK4 316 aa1.04□□□□□ -2.24
VCL-203ENST00000461383 TMEM14CQ9P0S9 112 aa1.04□□□□□ -2.24
VCL-203ENST00000461383 LAMTOR2Q9Y2Q5 125 aa1.04□□□□□ -2.24
VCL-203ENST00000461383 NUBP2Q9Y5Y2 271 aa1.04□□□□□ -2.24
VCL-203ENST00000461383 CD109Q6YHK3 1445 aa1.04□□□□□ -2.24
VCL-203ENST00000461383 PIK3C2AO00443 1686 aa1.04□□□□□ -2.24
VCL-203ENST00000461383 ADGBQ8N7X0 1667 aa1.04□□□□□ -2.24
VCL-203ENST00000461383 ANKRD31Q8N7Z5 1873 aa1.03□□□□□ -2.24
VCL-203ENST00000461383 TRBV6-4A0A1B0GX49 114 aa1.03□□□□□ -2.24
VCL-203ENST00000461383 hDV103S1A0JD37 113 aa1.03□□□□□ -2.24
VCL-203ENST00000461383 E7EQ34 232 aa1.03□□□□□ -2.24
VCL-203ENST00000461383 M0R2N4 97 aa1.03□□□□□ -2.24
VCL-203ENST00000461383 INE1O15225 51 aa1.03□□□□□ -2.24
VCL-203ENST00000461383 CXCL8P10145 99 aa1.03□□□□□ -2.24
VCL-203ENST00000461383 FABP2P12104 132 aa1.03□□□□□ -2.24
VCL-203ENST00000461383 CIRBPQ14011 172 aaKnown RBP1.03□□□□□ -2.24
VCL-203ENST00000461383 GRPEL2Q8TAA5 225 aa1.03□□□□□ -2.24
VCL-203ENST00000461383 PATE1Q8WXA2 126 aa1.03□□□□□ -2.24
VCL-203ENST00000461383 GGACTQ9BVM4 153 aa1.03□□□□□ -2.24
VCL-203ENST00000461383 NAT8BQ9UHF3 227 aa1.03□□□□□ -2.24
VCL-203ENST00000461383 RNF11Q9Y3C5 154 aa1.03□□□□□ -2.24
VCL-203ENST00000461383 SIP14410 1827 aa1.03□□□□□ -2.25
VCL-203ENST00000461383 ROS1P08922 2347 aa1.03□□□□□ -2.25
VCL-203ENST00000461383 TRAV27A0A087WT01 109 aa1.02□□□□□ -2.25
VCL-203ENST00000461383 IGHV1-58A0A0C4DH39 117 aa1.02□□□□□ -2.25
VCL-203ENST00000461383 B4DSR2 109 aa1.02□□□□□ -2.25
VCL-203ENST00000461383 H3BRM9 83 aa1.02□□□□□ -2.25
VCL-203ENST00000461383 CCL25O15444 150 aa1.02□□□□□ -2.25
VCL-203ENST00000461383 NDUFA6P56556 154 aa1.02□□□□□ -2.25
VCL-203ENST00000461383 TFAMQ00059 246 aaKnown RBP1.02□□□□□ -2.25
VCL-203ENST00000461383 EIF3IQ13347 325 aaKnown RBP1.02□□□□□ -2.25
VCL-203ENST00000461383 TMEM78Q5T7P6 136 aa1.02□□□□□ -2.25
VCL-203ENST00000461383 ZNF833PQ6ZTB9 187 aa1.02□□□□□ -2.25
VCL-203ENST00000461383 FAM216BQ8N7L0 139 aa1.02□□□□□ -2.25
VCL-203ENST00000461383 LINC00052Q96N35 136 aa1.02□□□□□ -2.25
VCL-203ENST00000461383 TCEAL2Q9H3H9 227 aaPredicted RBP1.02□□□□□ -2.25
VCL-203ENST00000461383 TMEM138Q9NPI0 162 aa1.02□□□□□ -2.25
VCL-203ENST00000461383 OTORQ9NRC9 128 aa1.02□□□□□ -2.25
VCL-203ENST00000461383 C22orf24Q9Y442 160 aa1.02□□□□□ -2.25
VCL-203ENST00000461383 FLG2Q5D862 2391 aaPredicted RBP1.01□□□□□ -2.25
VCL-203ENST00000461383 MED12Q93074 2177 aa1.01□□□□□ -2.25
VCL-203ENST00000461383 TECPR2O15040 1411 aa1.01□□□□□ -2.25
VCL-203ENST00000461383 HELZ2Q9BYK8 2649 aaKnown RBP1.01□□□□□ -2.25
VCL-203ENST00000461383 A0A096LPI6 279 aa1.01□□□□□ -2.25
VCL-203ENST00000461383 TRDV1A0A1B0GX56 115 aa1.01□□□□□ -2.25
VCL-203ENST00000461383 A0A1W2PRE2 83 aa1.01□□□□□ -2.25
VCL-203ENST00000461383 C5orf58C9J3I9 102 aa1.01□□□□□ -2.25
VCL-203ENST00000461383 KPNA4O00629 521 aaPredicted RBP1.01□□□□□ -2.25
VCL-203ENST00000461383 NUPR1O60356 82 aa1.01□□□□□ -2.25
VCL-203ENST00000461383 FAM107AO95990 144 aa1.01□□□□□ -2.25
VCL-203ENST00000461383 IGLV1-51P01701 117 aa1.01□□□□□ -2.25
VCL-203ENST00000461383 BCL2P10415 239 aa1.01□□□□□ -2.25
VCL-203ENST00000461383 S100GP29377 79 aa1.01□□□□□ -2.25
VCL-203ENST00000461383 DEFB115Q30KQ5 88 aa1.01□□□□□ -2.25
VCL-203ENST00000461383 PHF5AQ7RTV0 110 aaKnown RBP1.01□□□□□ -2.25
VCL-203ENST00000461383 ARPINQ7Z6K5 226 aa1.01□□□□□ -2.25
VCL-203ENST00000461383 ANGPTL5Q86XS5 388 aa1.01□□□□□ -2.25
VCL-203ENST00000461383 PRR15Q8IV56 129 aa1.01□□□□□ -2.25
VCL-203ENST00000461383 OR5AS1Q8N127 324 aa1.01□□□□□ -2.25
VCL-203ENST00000461383 MCEEQ96PE7 176 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms